Lonchura striata (white-rumped munia): 110475558
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Entry
110475558 CDS
T05897
Symbol
XYLT1
Name
(RefSeq) xylosyltransferase 1 isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
lsr00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
lsr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
110475558 (XYLT1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
110475558 (XYLT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lsr01003
]
110475558 (XYLT1)
Enzymes [BR:
lsr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
110475558 (XYLT1)
Glycosyltransferases [BR:
lsr01003
]
O-Glycan biosynthesis
Glycosaminoglycan
110475558 (XYLT1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
SPT2_N
Motif
Other DBs
NCBI-GeneID:
110475558
NCBI-ProteinID:
XP_021395485
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Position
14:5380080..5556011
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AA seq
917 aa
AA seq
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MVAAPCARRLARRSRSALVAALTVLLLQTLLVWNFSSLDAGEEQRGGREKRDRGGEQRGQ
PQRRGPAAPHGKAMIEPPSPYTSLETQDGYFSHRPKEKMRTDSNNENSVPKDFETIDNSN
FAPRTQRQKHQSELVKKPLSKQKEHLRKKLEEEKMKENRLLGKNSNEVVQFSDHLGKNSS
NSNNLKEIDRFPTQHLLQKIENSSPELKYDQPPKCEVTGKEAISAMSRAKSQQCRQEIAD
VYCQHKLGKLMPEQVTRFCALEGKANNNVQWDEDSVEFMPANPVRIAFVLVVHGRASRQL
QRMFKAIYHKDHFYYIHVDKRSNYLHRQVLQFASQYPNVRVTSWRMATIWGGASLLTTYL
QTMKDLMEMSDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDMNFLKSHGRDNARFIRKQ
GLDRLFLECDTHMWRLGDRKIPEGITVDGGSDWFLLNRKFVEYVTFSNDDLVTKMKRFYS
YTLLPAESFFHTVLENSPFCDSMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPA
DFHRFQQTARPTFFARKFEAVVNQEIIGQLDYYLYGNYPSGTPGLRSYWENVYEEPDGLG
ALSDVALTMFHSFSRLGLRRAESSLHAAGDSGCRYYPMGHPVSIHLYFLADRFQGFLIRH
HATNLAVSKLETLETWVMPKKVFKIASPPSDFGRLQFSEIGTEWDAKERLFRNFGGLLGP
TDEPVGMQKWGKGPNVTVTVIWVDPINVIAATYDILIESSAEFTHYKPPLNLPLRPGVWT
IKILHHWVQVAETKFLITPLTFSNQQPIKQEEAIKLHSGPPKNAYMEQSFQGLNPVLNIP
VSAARADQAKRNAGLVGTRLDAWVDSLVSSVWSAVDVCSVGPTACPVLQGCAQTAWSSLS
PDPKSELGPVKPDGRLR
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggctccgtgcgcccggcggctggcgcggcgctcccgctcggcgctggtggcg
gcgctcaccgtgctgctcctgcagaccctcctcgtctggaatttcagctccctcgacgcc
ggcgaggagcagcgcggcggccgcgagaagcgagaccgcggcggagagcagcgggggcag
ccgcagcggcgcggacccgccgccccgcacggcaaggcgatgattgaacctcctagtccc
tacaccagcttggagactcaggatggctatttttcccaccgaccgaaagagaaaatgcga
acagacagcaataatgaaaattcagtccccaaggactttgaaactattgataacagtaac
tttgctcccaggactcagagacaaaagcaccagtctgagctggtgaaaaaaccccttagc
aaacaaaaggagcacttgagaaagaaactggaagaggaaaagatgaaggagaacaggctg
ctggggaagaactccaacgaggtggtgcagttcagcgatcacctgggaaaaaacagcagc
aacagcaacaacctgaaggagattgacaggtttcccacacaacatcttttacaaaaaatt
gagaacagctcccctgaactgaaatacgaccaaccacccaagtgtgaggtgacgggcaag
gaggcgatctcggccatgtcccgtgccaagtcccagcagtgtcgccaggagatcgcagac
gtttattgccagcacaagcttgggaagctgatgccggagcaggtgacacgtttctgtgcc
ctggagggaaaagccaacaacaatgttcagtgggatgaggactccgtagagttcatgcca
gccaacccagtcaggatcgcatttgtcttggttgttcatggcagagcttcccggcagctc
cagcgcatgtttaaggctatttaccataaagaccatttttattacattcatgttgacaag
cgatccaattacttgcaccggcaagtgctgcagtttgccagccagtacccaaatgtgaga
gtcacctcctggagaatggccactatctggggaggagcaagtcttctgaccacttacctg
cagaccatgaaggacttaatggagatgagtgactggccctgggatttcttcattaacctc
agtgctgccgactacccaatcaggacaaacgatcagctcgtggcattcctgtccagatac
cgtgacatgaacttcttgaaatcacatgggagagacaatgccagatttatcagaaagcag
gggctggatcggctcttcctggagtgcgacacgcacatgtggcgcctgggggaccgcaag
atcccagaaggaatcaccgtcgacggagggtcggactggttcctcctgaacaggaagttt
gtggaatatgtcactttttccaatgatgatctggtaacaaagatgaagaggttttactct
tacacgctgcttcctgccgagtccttctttcacaccgtgctggagaacagcccgttctgc
gactccatggtggacaacaacctgcgcatcaccaactggaacaggaagctgggctgcaag
tgtcagtacaagcacattgtggactggtgtggctgctcacccaatgacttcaaaccagct
gacttccaccggttccagcagaccgccagaccaactttcttcgcccgcaagtttgaggcc
gtggtgaaccaggagatcattggccagctggactattacctgtacgggaattacccgtcg
ggcacgccggggctgcgctcctactgggagaacgtgtacgaggagcccgacgggctgggc
gccctcagcgacgtggccctcaccatgttccactccttctcccgcctgggcctgcgccgc
gccgagagctcgctccacgccgctggggacagcggctgcagatactaccccatgggccat
ccagtttccatccacctttacttccttgctgaccgtttccaaggcttcctgatcaggcac
cacgcaaccaatctggctgtcagcaaactggaaactttggaaacgtgggtgatgcccaag
aaagtcttcaagattgcaagtccaccgagtgattttgggaggttgcagttctcagagatt
ggcaccgagtgggacgccaaggaaaggcttttccggaattttggaggactccttgggcca
acggatgagccagttgggatgcagaagtgggggaaaggccccaatgtcactgtgactgtc
atttgggtggatcccattaatgtaattgcagcaacatatgatattcttattgaatccagt
gccgagtttactcactacaaaccacctctgaatttgcccctgcgacctggtgtctggaca
ataaaaattctgcaccactgggtacaggtagctgaaaccaaattcctcattactcctctc
accttctcaaatcagcagcccatcaaacaagaggaagccatcaagctccacagcgggcct
ccaaagaacgcctacatggagcagagcttccagggcctgaacccggtgctgaacatcccg
gtcagcgccgcccgcgccgaccaggccaagcgcaacgcggggctggtgggcacccgcctg
gacgcctgggtggactctctggtcagcagcgtctggtcggccgtggacgtctgcagcgtg
ggccccacggcctgccccgtcctgcagggctgtgcccagacagcctggagctccctcagc
cccgaccccaagtccgagctgggccccgtcaaacccgacggccgcctgaggtag
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