Lonchura striata (white-rumped munia): 110475569
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Entry
110475569 CDS
T05897
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110475569 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110475569 (GSPT1)
03012 Translation factors [BR:
lsr03012
]
110475569 (GSPT1)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110475569 (GSPT1)
Translation factors [BR:
lsr03012
]
Eukaryotic type
Release factors
110475569 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
CTLH_Armc9
Motif
Other DBs
NCBI-GeneID:
110475569
NCBI-ProteinID:
XP_021395507
UniProt:
A0A218V7L7
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All DBs
Position
14:4797507..4821034
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AA seq
622 aa
AA seq
DB search
MEANGSGSGSSSDSAPDCWDQADIEPGSGAGPGCAPPAAEAEAQQELLGAAFSRQLNVNA
KPFVPNVHAAEFVPSFLRSGPAPGLPPPSPPPGLPPPPPLGAPVEPSPEEQTASCEGSNA
AVNMEISESVVENGETEMSPEESWDHKEEPSEAELGGGPAGDAGPSEESAQEMMEEEEEI
PKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKN
RETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQAD
LAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEEC
KEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSEFCPWYIGLPFIPYLDNLPNFNRS
VDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDSVA
PGENLKIRLKGIEEEEILPGFILCDLNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIH
TCIEEVEITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRF
TLRDEGKTIAIGKVLKLVPEKD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaacgggagcggcagcgggagcagcagcgactcggctcccgactgctgggac
caggcggacatcgagccgggcagcggcgccggcccgggctgcgccccgccggccgcggag
gccgaggcgcagcaggagctgctcggggcggccttcagccggcagctgaacgtcaacgcc
aagcccttcgtgcccaacgtccacgccgccgagttcgtgccgtccttcctgcggagcggc
ccggcgcccggcctgccgccgccctcgcccccgcccggcctcccgccgccgccgccgctc
ggtgcacctgtagagccttctccagaggagcagacagcctcttgtgaaggttcaaatgct
gctgttaacatggaaatttcagaatctgttgtggaaaatggagagacagaaatgtcccca
gaagagtcgtgggaccacaaagaagaacccagtgaagcagagctcggaggtggtcctgca
ggggatgcggggccttctgaagagagcgctcaggaaatgatggaagaggaggaggaaata
ccaaaaccgaaatctgttgtagcacctccaggtgctcctaaaaaagagcacgtaaatgta
gtattcattggacacgtagatgctggcaagtcaactattggaggacaaataatgtatttg
acaggaatggttgacaaaagaacacttgaaaaatatgaaagagaagctaaagaaaaaaac
agagaaacatggtacctttcatgggccttagacacaaaccaagaagaacgagacaaaggt
aaaacagtagaagtgggtcgtgcctattttgaaacagagaagaaacacttcactatttta
gatgctcctggacacaagagctttgttccaaacatgattggtggggcttctcaagctgat
cttgctgtgctggttatttctgcaagaaaaggagagtttgaaactggatttgagaaaggt
ggacaaacaagagaacatgccatgttagcaaaaacagcaggtgtaaagcatttaatagtt
cttattaataaaatggatgatccaactgtaaactggagcaatgaaagatatgaggaatgt
aaagagaaactggtgccatttttgaagaaagttggcttcaatcccaaaaaggacattcat
ttcatgccctgctcaggactgactggagcaaaccttaaagaacagtcagaattctgtcct
tggtatattggattaccatttattccatacctggataatttgccaaacttcaaccgttca
gttgatggaccaatcaggctgccaattgtggataaatataaggacatgggcactgtggtc
cttgggaagctggagtcgggctctatttgcaaaggacaacagcttgtgatgatgccaaac
aagcacaatgtggaagttcttggaattctttctgatgatgtagaaactgactcagtagcc
ccaggtgaaaatctaaagatcagactgaagggaattgaagaggaggagatccttccagga
tttattctctgtgatctcaacaacctttgtcattctggacgtacatttgatgcccagata
gtgataattgagcacaaatccattatctgcccaggttataatgcagtgctgcacatccac
acctgtattgaagaagttgagataacagccttaatctgcttggtagacaaaaaaacagga
gaaaaaagtaagacacggccccgctttgtgaaacaagatcaagtctgtattgcccgttta
aggacagcaggaacgatctgccttgagacattcaaagatttccctcagatgggtcgcttc
accttaagggatgagggtaagaccattgcaattggaaaagttctgaaactggttccagag
aaggactaa
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