Lonchura striata (white-rumped munia): 110475591
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Entry
110475591 CDS
T05897
Symbol
TMC5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsr02000
]
110475591 (TMC5)
03037 Cilium and associated proteins [BR:
lsr03037
]
110475591 (TMC5)
Transporters [BR:
lsr02000
]
Other transporters
Pores ion channels [TC:
1
]
110475591 (TMC5)
Cilium and associated proteins [BR:
lsr03037
]
Other cilia and associated proteins
Stereociliary proteins
110475591 (TMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF2606
Motif
Other DBs
NCBI-GeneID:
110475591
NCBI-ProteinID:
XP_031361961
LinkDB
All DBs
Position
14:5926539..5949506
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AA seq
848 aa
AA seq
DB search
MSYHYNEAFENPDYHFSETLEIDRRGSSQRNRFSHQTPYDSSLHGSSGEHRGREQNYPVA
IPMASLGPGSDYSQDLPRTGPYGNFTDEPEPEETYTPYSTFHMLDYPYIHGISSGSEDSF
IRRRNRRPPDEIFSTSSSMFETDPVCNEEEDLVGSLASMSTNERIKAIQKMPETMRKKRE
IRNKVLKEITKKSKHRGAQSTQCLQGAAVSFRRFGNTLSECFHQLRLWHKTLKIIGAEFG
TSVLSYFVFLKWLLNLNIFSFLINFGFITIPQFLAAEPNNLSFTGLEVFTGAGYFQQTVL
YYGFYTNATISKVENGPSYNMQLAYIFTVGIYFVICFLILLFSMAKFFSRNINSQTFSVN
ASKLLCTWDFNITNEKAVKLQQKNLHTQIKESLTEVNKEVQNFSVMERVARIATHLLAWL
ASLGTAVAACAAVYFLSINNLKLFMKGYRNDLESQAVMLVLPVIVSLLNTLIPFFFSWLG
HLEKFQTPGQHIYVTITRNTILKMSIVGILCYYWLNIVATSESQCWETLVGQDIYRLVLV
DFIFCLLGSFFGEFLRRIIGTTVCMNLGLPEFDIGRNVLDLIYAQTLTWIGILFSPLLPG
IQMIAFFIVFFVKKVSLMRNCQPPRKVWRTAQMMTSFIFLLFCPSFLGVLSVIGVTVWRL
KPSEECGPFRGLSSMYAAVDEWIQILQSYTASKWVVWIYHNLISSELFFFILSSVLLVVI
YLYWQIIQGRKTMTELLRKQINNAGKDKIFLLKKLLTLQRAKRSSSALGGRGQQRSASSS
RQPAQEVPDYPERAFERNQNSSYNEHPFSVEISSSSDFPSAVVFGDSLPPGLASLRCRRL
PPQLTTCC
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcattacaatgaagcctttgaaaatccagactatcacttctcagagacattg
gaaattgatagaagggggagttctcaaaggaatcgattctctcaccaaaccccttatgat
tcatctctgcatggttcctctggagaacacagaggcagggagcagaactaccctgttgcc
atcccaatggcttccctgggacctggctctgactacagccaggatttacccagaacaggt
ccatatggaaatttcacagatgagcctgagccagaagagacttacaccccttattctacc
ttccatatgctggattatccctacattcatggaatttccagtggatcagaagacagcttc
attcggagacgcaaccgaagaccgcctgatgagatcttcagcacttcttccagcatgttt
gaaacagatcctgtgtgcaatgaagaggaagatttagttggaagtcttgcaagtatgtcc
accaatgaaaggattaaagcaatccagaagatgccagagaccatgagaaaaaaaagagag
atcagaaacaaagttcttaaagaaataacaaaaaaatcaaagcatcgtggtgctcaaagt
acacagtgtctgcagggagcagcagtgtcatttcggcggtttggaaataccctttcagaa
tgtttccaccaactgcggctatggcacaagactctgaagatcattggtgctgagtttgga
acaagtgtgctttcttattttgttttcttgaagtggctgctaaatttgaacatcttctca
ttcctcataaactttggtttcatcacaattcctcagtttcttgcagcagaaccaaataac
ctttcattcacgggcctggaggtgttcactggagctggttattttcaacaaacagtgctc
tactatggcttttacaccaatgctacaatcagtaaagtggagaatggtccatcttacaac
atgcagctggcctatattttcactgttggaatatattttgtcatctgttttcttatcttg
ttgttcagcatggcaaaattcttctccagaaacattaactctcagacattctctgtgaat
gccagcaagctgctctgcacttgggacttcaatataactaatgaaaaagctgtgaaactg
caacaaaagaatctccacacacaaataaaggaaagtctcactgaagtcaacaaagaagtt
caaaatttttctgtgatggagagggttgctcgtattgctactcatcttcttgcttggctt
gcttccctgggcacagcagtagctgcttgtgctgctgtttacttcctctccattaataac
cttaagctgtttatgaaagggtatagaaatgatctagagagccaagctgtcatgttggtg
ctacctgtgattgtatctctcctcaacacattgatcccattcttcttctcctggcttggg
cacctggagaagtttcagactcctggacagcacatatatgtcactattaccagaaatacc
atcctgaaaatgtcaattgttggaatactgtgctactactggcttaacatcgtggctacc
tcagagtcacagtgctgggaaactttggttggccaagatatttatcgtcttgttctagtt
gacttcatattttgtttgcttggctctttctttggggagtttttacgaagaattattgga
actacagtctgcatgaacctagggctgccagaatttgatattggacgaaatgttttagat
ttgatctatgcacagactttgacctggattggtatcctgttctcacctctgttgcctggt
atccagatgatagcattttttatagtattttttgtgaaaaaggtcagtctgatgaggaat
tgccagccccctcgcaaagtctggagaactgctcagatgatgacatccttcattttcctg
ctgttttgtccttccttccttggagtcctgtctgtcattggagtcactgtctggaggtta
aagccttcagaagaatgtggtcctttcagaggtttgtcgtctatgtatgctgcagtcgat
gagtggatacaaatactgcaaagttacactgcctcaaaatgggtagtgtggatctaccat
aatttaatttcaagtgaacttttcttcttcatcctgtctagcgttttactagttgttatt
tatctttactggcaaataatacaaggaagaaagaccatgactgagctcttacgtaagcaa
attaataatgcaggaaaagataagatatttctgcttaagaagctactaacactgcaaagg
gcaaagcgaagctcgtctgcactgggaggaagaggccagcagagaagtgcctcttcatcc
aggcaacctgcccaggaggtgccagactacccagaaagggcatttgagagaaaccaaaac
tcatcctacaatgagcatcccttttctgttgagatctcaagcagcagtgactttccatca
gcagtggtttttggtgacagccttcccccaggactggcatcacttcgatgcagaaggctc
cctccacagctgaccacgtgctgttga
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