Lonchura striata domestica (Bengalese finch): 110475661
Help
Entry
110475661 CDS
T05897
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lsr03037
]
110475661 (IFT88)
Cilium and associated proteins [BR:
lsr03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
110475661 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_7
TPR_19
TPR_14
TPR_8
TPR_6
TPR_16
ANAPC3
TPR_11
TPR_17
TPR_10
TPR_9
TPR-S
TPR_15
TPR_21
DUF2989
NatA_aux_su
DUF6584
Motif
Other DBs
NCBI-GeneID:
110475661
NCBI-ProteinID:
XP_021395636
LinkDB
All DBs
Position
1:45990258..46029761
Genome browser
AA seq
816 aa
AA seq
DB search
MMQNVHLAPENNEDDLYSGYNDYNPMFDTEDLENDVAFQQAARTSHGRKSSVTAKIPGTS
SPRPLATGFGSKAPLTSSMGRPMTGTIQDGVSRPMTAVQAAGYTKAAVRGSSFDPLGQAR
GPASPLEKKTSDSLEEKMRQLEKKVNELVEESCVANSCGDLKLALEKAKEAGRQERELLR
QREQIAPPESINLDLTYTVLLNLASQYVANEMYAEALTTYQVIVKNKMFSNGGILKVNMG
NIYLKQRNYSKAIKFYRMALDQITSSHKQMRIKIMENIGVAFIKTGQYIDAISSFEEIMS
ISPNLKAGFNLILCYFAIGNGEQMKKAFKNLIEVPLEVDYEDKYISLNDDLHTNLLIEAI
KNDSLSQIERDRKSLAEEYIMTAAKLIAPAIETSFAVGYDWCVDAVKASHYVELANDLEI
NKATTYLRQQNFNQALETLKMFEKKDSRVKSAAATNLSFLYYLGNELEQATNYADLAVNS
DRYNPAALTNKGNTIFANGDCEKAAEFYKEALRNDSLCTEALYNLGLAYKKLNRIDEALD
CFLKLHAILPNSAQVLYQLASIYQIMEDPNQAIEWLLQLISVVPTDPHVLSKLGNLYDTE
GDKSQAFHYYCESYRYFPSNIEVIEWLGAYYIDTQFCEKAIEYFERAALILPTQVKWQLM
VASCYRRSGNYQKALEKYKVIHRKFPENVECLRFLVRLCTDMGLKEVQEYITKLKKAEKL
KEIREQRIKSGREGSARSRKEGSADSGGTKGERLSAKLKALPGTSEPYESSSSKEIDASY
ADPLGPQPERPKTAARKRTEEDDFADEELGEDLLPE
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtgcatctggctcctgagaataatgaagatgatctctattctggatac
aatgattataatcccatgtttgacactgaggatttagaaaatgatgtagcttttcaacag
gcagcgagaacaagtcatggaagaaaatcctctgtgactgccaaaattcctggtacatca
agtccaagacctctagctactggatttgggtcaaaggcacctttaacttcatctatggga
agacctatgactggaactatacaggatggggtttctcgaccaatgacagcagtgcaagct
gcaggttacactaaagcagctgtgagaggttcttcatttgatcctcttggccaagcaaga
ggtcctgcttcacctctggaaaagaaaacttcagacagtttagaagagaagatgaggcag
ttggaaaaaaaagttaatgaactggttgaagaaagctgcgttgccaatagctgtggagac
ttgaaattggctctggagaaagcaaaagaagctggaagacaggaaagagaattgttgagg
caacgtgaacaaattgctcctccagaaagtatcaacttagacctcacttacacagttctc
ctcaatctggccagtcagtatgttgctaatgaaatgtatgctgaagcactgactacttac
caagttatagtgaagaataagatgttcagcaatggaggtatactgaaggtaaatatggga
aatatatatctgaaacaacggaactattccaaagctatcaaattctaccgtatggctcta
gaccagattactagttcccacaaacagatgaggataaaaataatggaaaatattggagtt
gcatttattaaaaccggccaatacatagatgccatttcttcatttgaagaaataatgagc
atatccccaaacctgaaggcaggcttcaacctgatcctatgttactttgctattggaaat
ggtgaacaaatgaagaaagccttcaaaaacctcattgaagttcccttggaagtggattat
gaggacaaatacatttcattaaatgatgatctgcatacgaatctactgattgaagccatt
aaaaatgacagtttaagtcaaatagaacgtgacaggaagtccttggcagaggaatacatc
atgacagctgctaaactcattgcaccagcaatcgagacatcttttgcagtaggctatgac
tggtgtgttgatgcggtcaaagcttcccactatgtggaattagccaatgatctagaaata
aataaagccactacttacttgaggcaacagaattttaatcaggcactggagactttgaaa
atgtttgaaaaaaaggatagcagagtaaagagtgcagctgcaacaaacctctcattcctt
tattatttggggaatgaattggaacaagcaactaactatgcagatttagcagtaaattct
gataggtacaatccagcagctctaactaacaaaggaaatactatttttgcaaatggagac
tgtgaaaaagcagctgaattttataaggaagctctcaggaatgattccttatgcactgaa
gcactttataatcttggtttagcttacaagaagttaaacaggatagatgaagctttggat
tgttttctgaaactccatgcaatccttccaaatagtgcccaagtcctttaccagctagca
agcatataccagatcatggaagatcccaatcaagccatagagtggctgctgcaattgatc
agtgtagtaccaactgatccacatgtactttcaaagctagggaatttatatgatactgaa
ggcgataaatcccaggcttttcattattactgtgagtcatacaggtatttcccttccaac
attgaagtcattgaatggcttggagcatattacattgacacccagttctgtgaaaaagcc
attgagtactttgaaagggcagcacttatcctgccaacacaagtgaagtggcagctgatg
gttgccagttgctacaggagaagcggcaactaccagaaagctctggagaaatacaaagtc
attcacagaaaattcccagagaatgttgaatgcctccgatttttagttcgtctctgcaca
gacatgggactgaaagaagtccaggaatatataacaaagctcaagaaagcagaaaaatta
aaagaaatcagagagcagcgcattaaatctggcagagagggcagtgcacgtagccgcaaa
gagggaagtgctgatagtggtggtaccaaaggggaaagactgagtgccaaactaaaagct
ctacctggaacaagtgaaccctatgaaagtagcagcagtaaagaaatagatgcctcctac
gcagatccacttggcccacaaccagaaagaccaaaaacagcagcaagaaaaagaacagag
gaagatgattttgctgatgaagaactaggagaggatctgcttccagaatag
DBGET
integrated database retrieval system
