Lonchura striata (white-rumped munia): 110475661
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Entry
110475661 CDS
T05897
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lsr03037
]
110475661 (IFT88)
Cilium and associated proteins [BR:
lsr03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
110475661 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_7
TPR_19
TPR_14
TPR_8
TPR_6
TPR_16
ANAPC3
TPR_11
TPR_10
TPR_17
ARM_TT21_4th
TPR_9
TPR-S
TPR_CcmH_CycH
TPR_15
ARM_TT21_5th
ARM_TT21_C
DUF2989
HEAT_Nup120
TPR_21
HAT_PRP39_C
NatA_aux_su
ARM_TT21_2nd
DUF6584
Motif
Other DBs
NCBI-GeneID:
110475661
NCBI-ProteinID:
XP_021395636
UniProt:
A0A218UFX3
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All DBs
Position
1:45990258..46029761
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AA seq
816 aa
AA seq
DB search
MMQNVHLAPENNEDDLYSGYNDYNPMFDTEDLENDVAFQQAARTSHGRKSSVTAKIPGTS
SPRPLATGFGSKAPLTSSMGRPMTGTIQDGVSRPMTAVQAAGYTKAAVRGSSFDPLGQAR
GPASPLEKKTSDSLEEKMRQLEKKVNELVEESCVANSCGDLKLALEKAKEAGRQERELLR
QREQIAPPESINLDLTYTVLLNLASQYVANEMYAEALTTYQVIVKNKMFSNGGILKVNMG
NIYLKQRNYSKAIKFYRMALDQITSSHKQMRIKIMENIGVAFIKTGQYIDAISSFEEIMS
ISPNLKAGFNLILCYFAIGNGEQMKKAFKNLIEVPLEVDYEDKYISLNDDLHTNLLIEAI
KNDSLSQIERDRKSLAEEYIMTAAKLIAPAIETSFAVGYDWCVDAVKASHYVELANDLEI
NKATTYLRQQNFNQALETLKMFEKKDSRVKSAAATNLSFLYYLGNELEQATNYADLAVNS
DRYNPAALTNKGNTIFANGDCEKAAEFYKEALRNDSLCTEALYNLGLAYKKLNRIDEALD
CFLKLHAILPNSAQVLYQLASIYQIMEDPNQAIEWLLQLISVVPTDPHVLSKLGNLYDTE
GDKSQAFHYYCESYRYFPSNIEVIEWLGAYYIDTQFCEKAIEYFERAALILPTQVKWQLM
VASCYRRSGNYQKALEKYKVIHRKFPENVECLRFLVRLCTDMGLKEVQEYITKLKKAEKL
KEIREQRIKSGREGSARSRKEGSADSGGTKGERLSAKLKALPGTSEPYESSSSKEIDASY
ADPLGPQPERPKTAARKRTEEDDFADEELGEDLLPE
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtgcatctggctcctgagaataatgaagatgatctctattctggatac
aatgattataatcccatgtttgacactgaggatttagaaaatgatgtagcttttcaacag
gcagcgagaacaagtcatggaagaaaatcctctgtgactgccaaaattcctggtacatca
agtccaagacctctagctactggatttgggtcaaaggcacctttaacttcatctatggga
agacctatgactggaactatacaggatggggtttctcgaccaatgacagcagtgcaagct
gcaggttacactaaagcagctgtgagaggttcttcatttgatcctcttggccaagcaaga
ggtcctgcttcacctctggaaaagaaaacttcagacagtttagaagagaagatgaggcag
ttggaaaaaaaagttaatgaactggttgaagaaagctgcgttgccaatagctgtggagac
ttgaaattggctctggagaaagcaaaagaagctggaagacaggaaagagaattgttgagg
caacgtgaacaaattgctcctccagaaagtatcaacttagacctcacttacacagttctc
ctcaatctggccagtcagtatgttgctaatgaaatgtatgctgaagcactgactacttac
caagttatagtgaagaataagatgttcagcaatggaggtatactgaaggtaaatatggga
aatatatatctgaaacaacggaactattccaaagctatcaaattctaccgtatggctcta
gaccagattactagttcccacaaacagatgaggataaaaataatggaaaatattggagtt
gcatttattaaaaccggccaatacatagatgccatttcttcatttgaagaaataatgagc
atatccccaaacctgaaggcaggcttcaacctgatcctatgttactttgctattggaaat
ggtgaacaaatgaagaaagccttcaaaaacctcattgaagttcccttggaagtggattat
gaggacaaatacatttcattaaatgatgatctgcatacgaatctactgattgaagccatt
aaaaatgacagtttaagtcaaatagaacgtgacaggaagtccttggcagaggaatacatc
atgacagctgctaaactcattgcaccagcaatcgagacatcttttgcagtaggctatgac
tggtgtgttgatgcggtcaaagcttcccactatgtggaattagccaatgatctagaaata
aataaagccactacttacttgaggcaacagaattttaatcaggcactggagactttgaaa
atgtttgaaaaaaaggatagcagagtaaagagtgcagctgcaacaaacctctcattcctt
tattatttggggaatgaattggaacaagcaactaactatgcagatttagcagtaaattct
gataggtacaatccagcagctctaactaacaaaggaaatactatttttgcaaatggagac
tgtgaaaaagcagctgaattttataaggaagctctcaggaatgattccttatgcactgaa
gcactttataatcttggtttagcttacaagaagttaaacaggatagatgaagctttggat
tgttttctgaaactccatgcaatccttccaaatagtgcccaagtcctttaccagctagca
agcatataccagatcatggaagatcccaatcaagccatagagtggctgctgcaattgatc
agtgtagtaccaactgatccacatgtactttcaaagctagggaatttatatgatactgaa
ggcgataaatcccaggcttttcattattactgtgagtcatacaggtatttcccttccaac
attgaagtcattgaatggcttggagcatattacattgacacccagttctgtgaaaaagcc
attgagtactttgaaagggcagcacttatcctgccaacacaagtgaagtggcagctgatg
gttgccagttgctacaggagaagcggcaactaccagaaagctctggagaaatacaaagtc
attcacagaaaattcccagagaatgttgaatgcctccgatttttagttcgtctctgcaca
gacatgggactgaaagaagtccaggaatatataacaaagctcaagaaagcagaaaaatta
aaagaaatcagagagcagcgcattaaatctggcagagagggcagtgcacgtagccgcaaa
gagggaagtgctgatagtggtggtaccaaaggggaaagactgagtgccaaactaaaagct
ctacctggaacaagtgaaccctatgaaagtagcagcagtaaagaaatagatgcctcctac
gcagatccacttggcccacaaccagaaagaccaaaaacagcagcaagaaaaagaacagag
gaagatgattttgctgatgaagaactaggagaggatctgcttccagaatag
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