Lonchura striata (white-rumped munia): 110475685
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Entry
110475685 CDS
T05897
Symbol
RRP1B
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B
KO
K14849
ribosomal RNA-processing protein 1
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsr01009
]
110475685 (RRP1B)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsr03009
]
110475685 (RRP1B)
Protein phosphatases and associated proteins [BR:
lsr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110475685 (RRP1B)
Ribosome biogenesis [BR:
lsr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
110475685 (RRP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
110475685
NCBI-ProteinID:
XP_021395687
UniProt:
A0A218UGQ3
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Position
1:5819872..5842205
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AA seq
750 aa
AA seq
DB search
MAPAAVQPPEVQFAQRLAANEKRIRDRALKKLRGYIGVRSQRPGGGFSQEELLKIWKGLF
YCMWMQDKPLLQEELAANISQLIHVFENTETRHLFIQTFWQTMNREWNGIDNLRLDKYYM
LMRLILRQSFEVLKRNEWDEXXVEPLLQLLMKEVMDPDSNSPTGIKFHFIDIYLDELAKV
GAKELTADQNLKFIEPFCKIAAKSKDRRVLHAVATGVFEMIVDQSPFAIEDLMKELGANS
DEENVSEEGKEENEQMLKTKDRSLSGKSAQNSEKTEDINENADDGIGTVLQFDYKAVADK
IFEFASKKNTPSLNRKRLYKLVKKFQDLAEGIFPQDIPEDVSTDEDDDESGRRKRKKKAV
KPWQQNELEKVKEDKEELSSEKVPSVSQRKRKKRKKRVSLSIDSGTDDGNCEEGKAETSG
SNASSQEKVPENKKERKRKKLLVNEASETTDVATDTIENQSISEQNSLTDAEQSKKSQLK
KMNPKVQNVPAKPACQNGPATASAAEDASPCVTPLPPKAVKKKQKAGAVLVNGDPPVQQT
DLKPSKEGLLGTLPKKGESAPSRKVILKTKLVGLEGMKVSTQNAAALKKKRKVKEVLNSV
EANGVLETVCKKNRKVESSAALSPLKKKKAKPGSDFVKFEKSTVPKAVFFRKARSTISST
RTPMQLNKLQTPSSKKVTFGLNKNMTAEFKKTDKSILVSPEGPSRVAFNPEQKPRHGVLK
SPTVTPAKEPQMKRPFTMSAKKRPTAVDFF
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgcggccgtgcagccgcccgaggtgcagttcgcgcagcgcttggccgccaac
gagaagcgcatccgagaccgcgccctcaaaaagctgcggggctacatcggcgtgcggagc
cagcgccccggcggtggcttcagtcaggaagaactgctgaaaatatggaagggccttttc
tattgtatgtggatgcaagataaacctctgcttcaggaggaacttgcagccaatatctcc
cagcttatccacgtgtttgagaatacagagactcgacacctgttcatccagacattttgg
cagacgatgaaccgggaatggaacgggattgacaatctgcgtctggacaagtactacatg
ctgatgcgtctgattttgaggcagtcctttgaagtgctgaaaagaaatgaatgggatgag
nnnnnngttgaaccattgctgcagctattaatgaaagaagttatggacccagacagcaat
tctcctactgggataaagttccatttcattgatatctatctggatgaattggctaaagtt
ggtgcaaaggagctcacagcagaccagaatctcaagttcatcgaacctttctgcaaaatt
gctgccaaatcaaaggaccggcgtgtgctccatgctgtggccaccggtgtctttgagatg
atcgtggatcagtcgcccttcgccatcgaggacctgatgaaagagctgggtgccaacagc
gatgaggagaatgtttctgaagaaggcaaagaggaaaatgaacagatgcttaaaaccaaa
gacagatctctgtcaggaaaatcagcacagaactctgaaaaaacagaggatatcaatgaa
aatgctgatgatgggattgggactgttcttcagtttgattacaaggctgtggctgacaaa
atctttgaatttgcaagcaagaaaaatacaccttccctgaacagaaagcggctgtacaag
ctggtcaaaaagttccaggacttagcagaaggaatcttcccccaagatattcctgaagat
gtttctacagatgaagatgatgatgaatccggtaggcgaaagcgaaagaaaaaagctgtc
aagccttggcagcaaaatgagctggaaaaagtaaaagaggataaagaagaactgtcaagt
gagaaggtgccatcagtttcccagagaaagaggaaaaaaaggaagaagagggtcagccta
agtattgattctggaacagatgatggaaattgtgaggagggaaaagctgaaacatctgga
tccaatgcttctagccaggaaaaggtgccagaaaataaaaaggagaggaagagaaagaaa
ttgctagtaaatgaggccagtgagaccacagatgtagcaactgacaccatagaaaatcag
agtatctctgagcagaacagtctgactgatgcggaacagagtaaaaagagtcagttgaag
aaaatgaatccaaaagtgcagaatgttcctgcaaaaccagcgtgtcagaatggaccagcc
actgccagtgcagcagaggatgccagcccgtgtgtcacacccttacctcctaaggctgtg
aaaaagaagcagaaagcaggagctgtcctggtgaatggggatccccctgtgcagcaaact
gacctgaaacccagcaaggaaggcttgctggggaccctgccaaaaaagggtgaatctgca
ccctccagaaaggtcatactgaagacaaagttagttggtttggaagggatgaaagtctcc
actcagaatgcagcagctctgaaaaagaagagaaaagtgaaagaggtcctaaactctgtc
gaagccaatggagttctggagactgtatgcaagaaaaacaggaaggtggaaagcagtgct
gctctgtcgccattaaagaaaaagaaagcgaaaccaggaagtgattttgtaaaatttgaa
aaatcaactgtaccaaaggcggtgttcttcaggaaagccagaagcaccatctcctccacc
aggacacccatgcagctgaacaaactgcagacacccagctccaaaaaagtcacgtttggc
ttgaataaaaacatgactgcagaatttaaaaagactgacaaaagcatattagtgagccca
gaaggaccctcccgtgtggctttcaatcccgaacagaaacctcgtcatggggtgctgaag
tcacccacagtgaccccagcaaaagagccccaaatgaagagaccatttacaatgtcagct
aagaagagaccaactgctgtggacttcttttaa
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