Lonchura striata (white-rumped munia): 110475857
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Entry
110475857 CDS
T05897
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110475857 (LRRC4C)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
ig
Ig_3
LRR_1
LRR_14
V-set
LRR_9
Ig_2
LRR_LRWD1
Ig_6
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
110475857
NCBI-ProteinID:
XP_021395993
UniProt:
A0A218UFL5
LinkDB
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Position
5:41396219..41889582
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AA seq
638 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLTAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLERIHLHHN
PWNCNCDILWLSWWIKDKAPSNTACCARCHTPPSLKGRYIGELDLNYFTCYAPVIVEPPA
DLNVTEGMAAEMKCRASTSLTSVSWITPNGSVMTHGAYRVRIAVLSDGTLNFTKVTVQDT
GLYTCMVSNSVGNTTASATLNVTALDNPGYTYFSTVTVETVEPSQDEAQTTEQVGPTPVT
NWETINMTTSLTPQSTRSTEKTFTIPVTDANNGIPGIDEVMKTTKIIIGCFVAITLMAAV
MLVIFYKMRKQHHRQNHHAPTRTVEIINVDDELTGDTPIESHLPMPAIEHEHLNHYNSYK
SPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctgttggctcttcagcttcttgtggtggctggt
ctagtgagggctcaaacttgcccttctgtctgctcctgcagcaaccagttcagtaaagtg
atttgtgtacggaaaaatcttagagacgtgccagacggcatctccaccaacacccggcta
ctcaatctccatgagaaccagattcaaataattaaagttaatagcttcaagcatctgagg
cacctagaaatcctgcagctcagcaggaatcacatcagaacaattgaaataggggctttc
aatggtctggccaatctcaatactttggaactctttgacaatcgtctgaccactatccca
aatggggcttttgtatacctatcaaaactgaaggaactgtggttgagaaacaaccccatt
gagagcatcccttcttatgcttttaacagaatcccttctctccggaggttggatttgggg
gaattgaaaaggctttcatacatctcagaaggtgcctttgaaggtctgtccaacttgagg
tatttgaaccttgccatgtgcaatcttcgagagattcctaaccttactccacttgtaaaa
ctggatgagttagatctttctgggaatcacctgactgccatccggccaggttctttccaa
gggttaatgcatcttcagaaattgtggatgatacagtcccagattcaagtgatagaaagg
aatgcttttgataaccttcagtcactagtagagatcaacctggcacacaacaatctaaca
ctactgcctcatgacctgttcacaccactccgcctagaaaggatccacttgcatcacaat
ccttggaactgcaactgtgatatcctttggctcagctggtggattaaagacaaggcaccc
tccaacactgcatgctgtgcccgttgccacacgccccccagtttaaaaggaaggtacatt
ggtgagctggacctgaattacttcacgtgttatgctccagtcatagtggagccaccagca
gacctcaacgtcacagaaggcatggctgcagagatgaaatgccgggcatcgacctccctg
acctcggtatcttggattactccaaatggatctgtcatgacgcatggggcatacagagtt
cggattgctgtgctcagtgatggcacattaaattttaccaaggtaactgtgcaagacaca
ggtttgtacacatgcatggtgagtaactctgttgggaataccacggcttctgccacgctg
aatgtgactgccctggataaccctggttacacgtacttttcaaccgtcacggtagagact
gtggaaccttctcaggatgaggcacagaccacagagcaagttgggcccacaccagttacc
aactgggaaaccattaacatgacaacctcactcactccacagagcacaagatcaacagaa
aaaacgttcaccattcctgtgacggacgcaaacaacgggatcccaggaatagatgaggtt
atgaagactaccaaaatcataattggttgttttgtggctatcactctcatggctgctgtg
atgctggtaattttctacaaaatgaggaaacagcatcaccggcagaaccatcatgctcca
acacggactgtagagatcattaatgtggatgatgagcttacaggtgacacacccatagag
agtcatttgcccatgccagcaatagagcatgagcacttaaatcactataactcttataaa
tctcctttcaaccacacaacaacagttaacacaataaattcaatacacagttcagtgcat
gaaccgttattgattcgaatgaactcgaaagacaatgttcaagagactcaaatctaa
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