Lonchura striata (white-rumped munia): 110475900
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Entry
110475900 CDS
T05897
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
110475900 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110475900 (RNF43)
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110475900 (RNF43)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110475900 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
KIAA1549
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
110475900
NCBI-ProteinID:
XP_021396062
UniProt:
A0A218UFI6
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All DBs
Position
19:2164455..2220582
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AA seq
828 aa
AA seq
DB search
MSAGPQVQLAVLWPWLLMATLQAGLGHTGLALAAAVESERAAAQKAIIRVIPLKVEPIIL
EGEFASVAEVTPAEGKLLQSHPLSLCNTSEDEHTESGFITIVKLEQPDRDPNPCLSLANK
AKLAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVK
IEVKEPPAWPDYDVWILLTVVSTVVVIILIFVVRTKCQLNRTQDSVQQQTLQAIGQLATR
RYQPRARLAPRWDSASSCSSTPVCAICLEEFSEGQELRIISCAHEFHRECVDPWLQQHHT
CPLCMFNILARDSGDQAIAASSRLVPQEMEPGRRLHLFRQHPGHALYHLPQAYPQRNLRS
FPPEPAHSNPFFHSPELSQLDFGTIHYMPYRPATSLLACGHVAPLAPGLLGQQHPNPSAC
GQALAPHRTCPLQPQPPSLAPKAAVAQKQHRVPTLRRGLGHGHQHNSSGSGESYLTEHSG
YLADGPGSDSSSGPCHGSSSDSMLNCTDVSLQGIHGSCSTFRSSLSSDYDPFVYCSSEGP
TTDHGQEQLRPPRERRPRSLDLIVPGGAAPAKPQVLSHIHYHHHQHHHYRQDAECPPGQG
PRQHKSRYSGAKVAFHSVRTQKRTEKSHHSQQPLGSSAVLQEAAPVGQPACPQEGQEPSH
APSTSPNRLDFGVDANRQLGAAGTPPVPLPSRHSLQSRHHRRKRKCHLEPNPALLPKDSA
ESGACDTHLPPGHPAGYRCSPEAQPLIPSAPLASGSRPLWKCLVPQSSFELRKQEEGLSG
QERNHLVPADFSGTCTPRHSLSVRLHCPSQQGGQGSEEEVQDVREHSV
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctggcccccaggtgcagctggctgtcctctggccttggctgctcatggcgacc
ctgcaggcaggactgggccacaccgggctggcgctggcggcggccgtggagtcggagcgg
gcggcggcgcagaaagccatcatcagggtgatcccgctcaaagtggagcccatcatcctg
gaaggggagttcgccagcgtcgccgaggtgactccggccgaagggaaactgctccagtcc
cacccactatccctgtgcaacaccagtgaggatgaacacacggaatcgggattcatcacc
atcgtcaagctggaacagccggatcgggatcccaacccctgcctgtccctggccaacaaa
gcaaaactggcaggggagcgtggagcccgtgcgatcctttttgacatcaccgatgacgaa
agtgctgctgatcagctgaggaagcccagaggcctgagccagcctgtggtcctaatcagg
ggccatgatgctgagctcctcatgggcgtcgtgaacaagaacagagaggcccatgtgaag
atagaggtcaaggagccaccagcttggccagactatgacgtgtggattcttctcacagtg
gtcagcactgtggttgtcatcattttgatttttgttgtccgcacaaagtgccagctgaac
aggactcaggactcggtgcagcagcagaccctgcaggccattgggcaactggccacacgg
cgctaccagccccgggcacggctggccccgcgctgggactcagccagcagctgcagctcc
accccggtctgtgccatctgcctcgaggagttcagcgagggccaggagctgcggatcatc
tcgtgcgcccacgagttccatcgggaatgtgttgacccttggctgcagcaacaccacaca
tgtccactttgcatgttcaatattcttgccagagactcgggggaccaggccatagctgcc
agctccaggctggtccctcaggaaatggagcctgggcgccgactccaccttttccgccag
catccaggacatgccctttaccacctcccacaagcatatcctcagaggaacctcaggagc
tttcccccagagccagcccacagcaaccccttcttccactctccagagctctcccagctg
gattttggcaccatccactacatgccctacagaccagccacctccctgctggcctgtggc
cacgtggcaccgctggccccaggcctgctggggcagcagcaccccaacccctctgcatgc
gggcaggcgctggcacctcacaggacatgtccccttcagcctcagcccccctctctggca
cccaaggcagccgttgcacagaagcagcaccgcgtgcccaccctgcgccgagggcttggc
cacgggcaccagcacaacagcagcggctctggggagagctatctcacggagcacagtggg
tacctggctgacgggccaggcagtgactccagctcggggccctgccacggctcctccagc
gactccatgttgaactgcacggatgtcagcctgcagggcatccatggcagctgctccacg
ttccgcagctccctcagcagcgattacgatcccttcgtgtactgcagctccgagggcccc
accacagaccatggccaggagcagctgcggccgcccagggagaggcggccccggtccttg
gacctgatagtgcccgggggggctgctccggccaagccccaggtgctcagccacatccac
taccaccaccaccagcaccaccactacaggcaggacgcagagtgtccccctgggcagggg
cccaggcagcacaaatcccggtattctggggccaaggttgccttccacagtgtccggacg
caaaagaggactgagaaaagccatcactctcagcagcctctgggaagcagtgctgtgctg
caggaggcagctccagtgggccagccagcctgtccccaggaaggccaggaaccctctcat
gccccttccacttccccaaacaggctggactttggtgtagatgccaacagacaattggga
gcagctggcacaccacctgtcccactgccctccagacacagcttacagagcaggcaccac
cgaaggaaaagaaagtgtcacctggagcccaaccctgctctcctgcccaaggactcggct
gagtccggagcctgcgacactcacctgcctcccggccatcccgctggctaccgctgctct
cccgaagcccagcccctgatcccaagtgctcccctggccagtggctcccggccactctgg
aaatgtttagtgccacagtccagcttcgagctgaggaagcaggaggaggggttgtcagga
caggagagaaaccacttggttcctgcagatttctcagggacgtgcacccccagacacagt
ctgagtgtccgtcttcactgcccatctcagcagggtggtcagggatctgaagaggaggtc
caggatgtccgtgaacactcagtttaa
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