KEGG   Lonchura striata (white-rumped munia): 110476035
Entry
110476035         CDS       T05897                                 
Symbol
NUP43
Name
(RefSeq) nucleoporin Nup43
  KO
K14305  nuclear pore complex protein Nup43
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110476035 (NUP43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsr03019]
    110476035 (NUP43)
   03036 Chromosome and associated proteins [BR:lsr03036]
    110476035 (NUP43)
Messenger RNA biogenesis [BR:lsr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110476035 (NUP43)
Chromosome and associated proteins [BR:lsr03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    110476035 (NUP43)
SSDB
Motif
Pfam: WDR55 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_WDR3_2nd Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR36-Utp21_2nd EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_SCAP CPSF_A KNTC1_N Beta-prop_DCAF12 WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 110476035
NCBI-ProteinID: XP_021396297
LinkDB
Position
3:56363845..56372883
AA seq 374 aa
MEDVSAKFVSQKISRTRWRPLPAAALQPPDLFATGSWDNEDNRISIWSAGDLGNAGLNGE
YHGEPHLLCDIQHNGDVMDMQFLDQERIVVASSTGTVTVFRHHQNNQTLSADHRWEKAHY
HVDQDTACGGAACTGVVCNNPEIVTVGEDGRINLFRADQKDAVRTIDNADSSTLHAVTFL
RTTEILTVNSIGQLKIWDLRQQRNEPSQMFSLAGDRVPLHCVDRHPNQQHIVATGGQDGM
LSIWDIRQGTMPVSLLNAHEAEMWEVHFHPSDPDHLFTCSEDGSLWHWDTSTNVSEKPSF
LHQGGRSTAYLSHSTINQSVVSAWLSSDPTKDRMEITNLIPNQTLSVNSLDVLGPCLVYG
TDAEAIYVNRHLFA
NT seq 1125 nt   +upstreamnt  +downstreamnt
atggaggacgtgagcgccaagttcgtgtcgcagaagatcagccggacgcgctggcggccc
ctgcccgccgccgcgctccagccccccgacctcttcgccaccggctcctgggacaacgag
gacaacaggatctccatttggtctgctggcgaccttggaaatgcgggcctcaacggtgaa
tatcatggagaacctcatttgctgtgtgacatccagcacaacggcgatgttatggatatg
cagtttttggatcaagagagaatcgtggttgcctcatcaacaggaactgtaactgtattc
cgtcatcatcaaaataaccagacattatctgctgaccaccggtgggagaaagcccattat
catgtggatcaagacacagcttgtggtggagcagcctgtacaggagttgtctgcaacaac
ccagaaattgtcactgttggagaagatggtagaataaatctcttcagggcggaccaaaaa
gatgcagtaagaactatagacaacgcagacagcagtacactccatgcagtgactttcctt
cgcacaactgagatcttgacagtaaactcaattggacagttaaaaatatgggacctcaga
cagcaaagaaatgagccatctcaaatgttttctttggcaggtgacagagttccactgcac
tgtgtggataggcatcccaatcaacagcatattgtagccacagggggccaggatggaatg
ctgagtatatgggatatcaggcagggtactatgccagtttccctgctaaatgctcatgaa
gcagaaatgtgggaagttcacttccatccctctgaccctgatcatttattcacgtgttct
gaagatggatctctttggcactgggatacttccacaaatgtatctgaaaaaccatctttc
cttcatcaaggaggaagaagcactgcctatctttcccacagtaccattaaccagtctgta
gtaagtgcctggctaagcagtgatccgaccaaagaccgcatggaaatcaccaacctgatt
ccaaatcagactttgtctgtgaatagtttagacgttctaggaccatgcctggtatatggt
actgacgcggaggctatttatgtgaacagacacctttttgcatga

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