Lonchura striata (white-rumped munia): 110476035
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Entry
110476035 CDS
T05897
Symbol
NUP43
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110476035 (NUP43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110476035 (NUP43)
03036 Chromosome and associated proteins [BR:
lsr03036
]
110476035 (NUP43)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110476035 (NUP43)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110476035 (NUP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_SCAP
CPSF_A
KNTC1_N
Beta-prop_DCAF12
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
110476035
NCBI-ProteinID:
XP_021396297
LinkDB
All DBs
Position
3:56363845..56372883
Genome browser
AA seq
374 aa
AA seq
DB search
MEDVSAKFVSQKISRTRWRPLPAAALQPPDLFATGSWDNEDNRISIWSAGDLGNAGLNGE
YHGEPHLLCDIQHNGDVMDMQFLDQERIVVASSTGTVTVFRHHQNNQTLSADHRWEKAHY
HVDQDTACGGAACTGVVCNNPEIVTVGEDGRINLFRADQKDAVRTIDNADSSTLHAVTFL
RTTEILTVNSIGQLKIWDLRQQRNEPSQMFSLAGDRVPLHCVDRHPNQQHIVATGGQDGM
LSIWDIRQGTMPVSLLNAHEAEMWEVHFHPSDPDHLFTCSEDGSLWHWDTSTNVSEKPSF
LHQGGRSTAYLSHSTINQSVVSAWLSSDPTKDRMEITNLIPNQTLSVNSLDVLGPCLVYG
TDAEAIYVNRHLFA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgtgagcgccaagttcgtgtcgcagaagatcagccggacgcgctggcggccc
ctgcccgccgccgcgctccagccccccgacctcttcgccaccggctcctgggacaacgag
gacaacaggatctccatttggtctgctggcgaccttggaaatgcgggcctcaacggtgaa
tatcatggagaacctcatttgctgtgtgacatccagcacaacggcgatgttatggatatg
cagtttttggatcaagagagaatcgtggttgcctcatcaacaggaactgtaactgtattc
cgtcatcatcaaaataaccagacattatctgctgaccaccggtgggagaaagcccattat
catgtggatcaagacacagcttgtggtggagcagcctgtacaggagttgtctgcaacaac
ccagaaattgtcactgttggagaagatggtagaataaatctcttcagggcggaccaaaaa
gatgcagtaagaactatagacaacgcagacagcagtacactccatgcagtgactttcctt
cgcacaactgagatcttgacagtaaactcaattggacagttaaaaatatgggacctcaga
cagcaaagaaatgagccatctcaaatgttttctttggcaggtgacagagttccactgcac
tgtgtggataggcatcccaatcaacagcatattgtagccacagggggccaggatggaatg
ctgagtatatgggatatcaggcagggtactatgccagtttccctgctaaatgctcatgaa
gcagaaatgtgggaagttcacttccatccctctgaccctgatcatttattcacgtgttct
gaagatggatctctttggcactgggatacttccacaaatgtatctgaaaaaccatctttc
cttcatcaaggaggaagaagcactgcctatctttcccacagtaccattaaccagtctgta
gtaagtgcctggctaagcagtgatccgaccaaagaccgcatggaaatcaccaacctgatt
ccaaatcagactttgtctgtgaatagtttagacgttctaggaccatgcctggtatatggt
actgacgcggaggctatttatgtgaacagacacctttttgcatga
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