Lonchura striata (white-rumped munia): 110476082
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Entry
110476082 CDS
T05897
Symbol
SRSF5
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03040
Spliceosome
lsr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110476082 (SRSF5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110476082 (SRSF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsr03041
]
110476082 (SRSF5)
Spliceosome [BR:
lsr03041
]
Common components
Common spliceosomal components
SR proteins
110476082 (SRSF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
DUF2202
Motif
Other DBs
NCBI-GeneID:
110476082
NCBI-ProteinID:
XP_021396434
UniProt:
A0A218UF73
LinkDB
All DBs
Position
5:33798273..33802770
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AA seq
265 aa
AA seq
DB search
MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK
ELCSERVTIEHARARSRGRGRGRYSDRFSSRRLRSDRRNAPPLRTENRLIVENLSSRVSW
QDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIKLIEGSK
RHSRSRSRSRSRSRSSSGSRSRSRSRSRKSYSRSRSRSRSKSRSVSRSPLPSKSQKRGSS
SRSKSPSSVDRQRSRSRSRSVDSGN
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctgccgcgtcttcatcgggaggctgaacccggccgccagggagaaggatgtc
gagaggttcttcaaggggtacggccgcatccgcgacatcgacctgaagaggggcttcggc
ttcgtggagtttgaagatccgagggatgcagatgatgctgtttatgaattggatggaaaa
gaactttgcagtgagagggtgaccattgagcatgccagagcacgctcgaggggcagaggc
agagggaggtactctgaccggttcagtagccgccgcctgcgcagtgacaggagaaacgcc
ccacctctaagaacagaaaatcgcctcatagtggaaaatttgtcttcccgtgtcagctgg
caggatctcaaagacttcatgaggcaagccggggaggtaacctttgcagatgcacacaga
cctaagttaaatgaaggggtggttgaatttgcctcttacagtgatttaaagaatgctatt
gaaaagctttctggtaaagaaattaacggaaggaaaatcaaactaattgaaggcagcaaa
aggcacagtaggtcccgcagcagatcccggtcacgcagcaggagctcatccgggtctcgc
agccgctctcgctcccgcagccgcaagtcctacagcaggtcacggagcaggagccgcagc
aagtcgcgatcagttagcagatctccactgccaagcaagagccagaaacgtggttcttcc
agcagatccaaatctccatcatccgtagaccgacagaggtctagatcaaggtccagatct
gttgacagtggcaattga
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