Lonchura striata (white-rumped munia): 110476123
Help
Entry
110476123 CDS
T05897
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110476123 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110476123 (DHX36)
03012 Translation factors [BR:
lsr03012
]
110476123 (DHX36)
Enzymes [BR:
lsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110476123 (DHX36)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110476123 (DHX36)
Translation factors [BR:
lsr03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110476123 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
Sir1
AAA_19
ATPase
nSTAND3
AAA_23
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
110476123
NCBI-ProteinID:
XP_021396504
LinkDB
All DBs
Position
9:complement(757388..772609)
Genome browser
AA seq
985 aa
AA seq
DB search
MSYEQRRERGRGRGRGRGRGGDGGAASAASSAAGGPGGRERHPGHLKGREIGMWYARRQG
QKNRDADRQQRAVVRMDERREEQIVQLLNSVQAKNDKEQEAMSWWSGDEEGPAPEQPAKV
KPDAEKAPVRQTPAWKKTSLDLDVEFLCEKTEQDADLDEQLKEDLMKKRSDPRYIEMQRF
REKLPSYGMREELVKLINSSRVTVISGETGCGKTTQVTQFILDDHIERGLGSTCRIVCTQ
PRRISAISVAERVAAERAESCGNGRSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDK
HLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDHCPM
IHIPGFTFPVVEYLLEDVIEKLRYTPEKTDRRQHWRKGFMQGHMSRPEKEEKEEIYRQQW
PGYLRQLQDRYSASTISALEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNIST
LHELLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDV
VFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLL
DDYQLPEILRTPLEELCLQIKILRLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQ
EELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADA
RRKELSRNTKSDHLTVVNAFTGWEEARGCGLWNEKDYCWEYFLSSNTMQMLHNMKGQFAE
HLLAAGFVNSRNPKDPKSNTNSGNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKT
DGSVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDK
DQDTIAVDEWIVFQSPEKIANLVKKLRKELDDLLQEKIEKPHPVDWNDIKSRDTAVLTAI
IDLITTQENEGVRNFAPRFQGERYS
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcagcgccgcgagcggggccgcgggcgcggccggggccggggccgcggc
ggcgatggcggcgccgcctccgccgcctcctccgcggccggcgggcccggcgggcgggag
cggcaccccgggcacctgaagggccgcgagatcgggatgtggtacgcccgccggcagggc
cagaagaaccgggacgccgaccggcagcagagagccgtggtgcgcatggacgagcgccgg
gaagagcagatcgtgcagctgctgaactccgtccaggcgaagaacgacaaagagcaggaa
gccatgtcctggtggtccggcgatgaggagggccctgctccagaacagcctgccaaagtg
aaaccagatgctgagaaagctcctgtcagacagacaccagcctggaagaaaacatccctg
gatttggatgtggaattcctctgtgaaaaaaccgagcaagatgctgatttagatgagcaa
cttaaagaagacttaatgaagaagagatctgatcccagatatattgaaatgcagagattc
cgagagaagctcccctcatacgggatgagagaggagctggtgaagctgatcaacagcagc
cgcgtgacggtgatcagcggcgagacgggctgcgggaagaccacgcaggtgacgcagttc
atcctggacgaccacatcgagcgcgggctgggctccacgtgccgcatcgtgtgcacgcag
ccgcgcaggatcagcgccatctccgtggctgagagagtggctgctgagagggcagagagc
tgtggcaatggcaggagcacggggtaccagatccgcctgcagagtcgcttgccaaggaag
caaggttcaattttgtactgtaccacgggaattgtcctgcagtggctccagtcagataaa
cacttgtccagcatcagtcatgtagttcttgatgaaatccatgaaagaaatctgcaatca
gatgttttaatgagcattattaaagatctcctgaatgttcggctggatctgaaagtcata
ctgatgagtgctactttaaatgcagagaagttttctgagtactttgaccactgcccaatg
attcacatccctggcttcactttcccagtggtggaatatctgctcgaagatgtcattgag
aagttgaggtacaccccggaaaagacagaccgccggcagcactggaggaagggcttcatg
cagggccatatgagcaggccagagaaggaggagaaggaggagatctacaggcagcagtgg
ccaggctacctaaggcagctgcaggacaggtattcagcaagtacaatcagtgccctggaa
atgatggatgatgacaaggtggacctggaccttatagcagcactgatcagacacattgtg
ctggaagaggaggatggtgccattctggtgtttctgccaggctgggataacatcagcact
ttgcatgagctcttgatgtctcaagtcatgtttaagtcagataggtttattatcatacct
ttgcattcactgatgcctacggttaaccagactcaggtgttcaagaagaccccgccagga
gtgaggaaaattgtgattgcaaccaacattgcagaaaccagcatcacaattgatgacgtc
gtgttcgttatagatggggggaagataaaggagactcactttgacacccagaacaacatc
agcaccatggcagcagagtgggtcagcaaagccaatgccaagcagaggaagggtcgagca
ggaagagttcagccaggccactgttaccatctgtacaacggactgcgtgccagcctcctg
gatgattatcagttaccagagatcctgaggacacccttggaagagctctgcttacaaatc
aagatcctgaggcttggtggaattgcctattttctgagcaaactgatggaccctccatct
cgtgatgctgtgatgttggccataaatcacctcatggagctgaacgctctggacaggcag
gaggagctgacgcccctgggggtgcacctggcccggctgcccgtggagccacacatcggg
aagatgatcctgtttggagccctgttctgctgcttggaccccgtgctgaccattgcagcc
agcctcagcttcaaggacccttttgtcatccctctgggcaaagagaaaatcgcagatgca
agaagaaaggagctgtcaaggaacacgaaaagcgatcatctgactgtggtgaatgctttc
actggctgggaagaggctcggggttgtggtctctggaatgagaaggactattgctgggaa
tatttcctgtcctcaaacaccatgcagatgctgcacaacatgaaagggcagtttgctgag
catctccttgctgctggatttgtgaatagtagaaaccccaaggatcccaaatctaacacc
aactcaggtaatgagaagctgctcaaagctgtcatctgtgctggcctctatcccaaagtg
gcaaagatccggcccagcttcagcaaaaagagaaaaatggtgaaagtttgcaccaagaca
gatggatcagttaatatccaccccaaatctgtgaatgtggaggaaacagagttccattat
aactggctcgtgtaccatttgaagatgaggaccagcagtatttacctgtatgattgtaca
gaggtgtctccatactgcctcttgttctttggaggggatatatccattcagaaggataag
gaccaggacaccatcgctgtggatgagtggattgttttccagtctccagaaaaaatagca
aacttggtcaagaaactgagaaaagaacttgatgatcttctacaagagaagatagagaag
ccccatccggtggactggaatgacattaaaagcagggacacggcagtgctgacagccatc
atagacttgatcaccacgcaggagaacgagggcgtcaggaacttcgcgccgcgcttccag
ggcgagcgctacagctga
DBGET
integrated database retrieval system
