Lonchura striata (white-rumped munia): 110476160
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Entry
110476160 CDS
T05897
Symbol
DDX27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsr03041
]
110476160 (DDX27)
03009 Ribosome biogenesis [BR:
lsr03009
]
110476160 (DDX27)
Enzymes [BR:
lsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110476160 (DDX27)
Spliceosome [BR:
lsr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110476160 (DDX27)
Ribosome biogenesis [BR:
lsr03009
]
Eukaryotic type
Pre-60S particles
Helicases
110476160 (DDX27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
FerA
AAA_22
Cas3-like_C_2
PRK
Motif
Other DBs
NCBI-GeneID:
110476160
NCBI-ProteinID:
XP_021396567
UniProt:
A0A218UEU4
LinkDB
All DBs
Position
20:14906393..14912740
Genome browser
AA seq
757 aa
AA seq
DB search
MATLESLGLVGTIAEGDVVPVDSESGDSEDEEELPRAPGPGRRRPSRGDFSAEFVFGEAE
AGGEDAWTAALRQLRGKKAATTLDEKIEKVRQKRKLQEREAKQVKVKAEDAEAEDDQTKN
EPEDCSRDEEDVESEYSLDDESIFTKADKVKVKEKKRSKKGEVGAENFFEDASQYDDNLS
FQDMNLSRPLLKAITALGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFILPVLER
LIYKPRQAPITRVLVLVPTRELGIQVHSVTKQLAQFSSVTTCLAVGGLDVKTQEAALRSG
PDILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIRLCSHHRQTM
LFSATMTEEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVTALLT
RTFQDHVMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQTQRLESLRRFKDEQIDILVA
TDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGKAGRSVSLVGEEERKMLKEIV
KTAKTPVKARILPQDVILKFREKIENLEKDIYAVLCLEREEREMQQSEAQINKAKKQLET
GKKETGSENVERSWFQTREERKKEKLAKALQEFDLALRGKKKRKKFVQDTQKKGQMTPEE
RSQFEILKSQMYAERLAKRNRRAKRARALPEEEPAAAPAGPKKKKKLSVFDEELTNTSRK
ALKQYRAGPSFEDRKRLGIAQRRKGGNFKSKSRYKRK
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggccacgctggagagcctgggcctggtgggcaccatcgccgagggggacgtggtgccc
gtggactcggagtctggcgactccgaggacgaggaggagctgccccgggcgccgggcccc
gggcggcggagaccctcccgcggggacttcagcgccgagttcgtgttcggggaggcggag
gccggcggggaggatgcctggacggcggcgctgcggcagctccgcggcaagaaagcagct
acgacgctggatgagaagattgagaaagtgagacagaaaaggaagctccaggaaagggaa
gctaaacaagtaaaagtgaaagctgaggatgcagaggctgaagatgatcaaaccaaaaat
gagcctgaggattgcagtagggatgaagaagatgtggagtctgagtattcactggatgat
gaaagtatcttcacaaaagcagataaggtcaaagtgaaggaaaagaagagatcaaaaaag
ggagaagtgggagcagaaaacttttttgaagatgcctctcagtatgatgacaacttgtca
ttccaggacatgaatctttcacgacctttgctgaaggcaatcacagctcttggcttcaag
caaccaaccccgattcagaaggcttgtatcccagtgggtcttctgggaaaggatatttgt
gcttgtgctgccactgggacaggtaaaacagctgccttcatcttgcctgtccttgagcgc
ctgatttacaaacctcgtcaggctccaataacacgtgtactggttctggtgccaacacga
gaactgggtattcaggtgcactctgtcacaaaacagctggcacagttcagcagtgtcaca
acttgcctggcagtaggtggcctggatgtgaagactcaggaagctgctctgcgctcaggg
ccagacattcttattgccactcctgggcgactgattgatcatctccacaactgtccttct
ttccacctgagcagtgttgaggtgttgattttggatgaagcagacaggatgctggatgaa
tactttgaggagcagatgaaggaaataatcaggttgtgttcccaccaccgtcagacaatg
cttttctctgccacaatgactgaggaggttaaagatttggcttctgtttccctgaaaaat
cccgtccgaattttcgtgaacagcaacacggatgttgctcctttcctgcggcaggaattt
atccggatcagacccaaccgggagggggaccgggaggccattgtaacagctctgctgaca
cgaaccttccaagatcatgtgatgcttttcacccagaccaagaagcaagctcaccgcatg
cacatcctgctgggactgatgggcctgcgggttggggagcttcatggcaacctctcgcag
acacagcggctggaatcactcaggcgctttaaggatgagcagattgatatcctggtagct
acagatgtggctgcacgtggacttgatattgaaggtgttaaaacagtaatcaattttact
atgccaaacaccatcaaacactatgtccaccgtgtgggtcggacagccagggctggcaag
gctggtcgttcagtttcacttgtgggtgaggaagagcgcaagatgctgaaggagattgtc
aagactgctaaaacaccagtgaaagccagaatcctcccccaagatgtcatattgaaattt
cgggagaagattgagaatctagagaaagatatctatgcagttctctgcttggagcgtgag
gaacgtgagatgcagcagtcagaggcccagatcaataaggcaaagaagcagctggagaca
ggaaaaaaagagactgggagtgagaatgtggagcggagctggttccagacccgtgaggag
aggaagaaagagaaattggctaaagccctgcaagaatttgacctagcattacgagggaaa
aagaaaaggaagaaatttgtacaggacacacagaaaaaaggccaaatgacaccagaggag
aggtcacagtttgagatcttgaaatctcaaatgtatgctgagcgtttggcaaagaggaat
cgccgagcaaagagagccagagccttgccagaagaggaaccagcagcagcaccagcaggt
cccaagaagaagaaaaaattgtctgtgtttgatgaagagctgaccaacacaagcaggaag
gctctgaagcagtatcgtgctggcccatcatttgaagatcgaaaacgcttgggtatcgcc
cagcgcaggaaaggaggaaacttcaaatccaagtccaggtataagagaaagtaa
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