Lonchura striata (white-rumped munia): 110476189
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Entry
110476189 CDS
T05897
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
110476189 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
110476189 (LIMCH1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
110476189
NCBI-ProteinID:
XP_021397041
LinkDB
All DBs
Position
4:complement(48109329..48282604)
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AA seq
1747 aa
AA seq
DB search
MASPGLELGEVQPPAEPPQPELAFTEAQKWIEQVTGRSFGEKDFRSGLENGILLCELLNA
IKPGLVKKINRLPTPIAGLDNIILFLRGCKELGLKESQLFDPGDLQDTSNRVTVKNIDYS
RKLKNVLVTIYWLGKAANSCTSYSGSTLNLKEFEGFLAQMRKETEDIESPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSQQTPSPDVVLRGSSDGRGSDSETDLPHR
KMPDVKKDDMLARRTSHGEPKSAVPFNQYLPNKSNQTCYVPAPLRKKKAEREEYRKSWST
ATSPLGDRPFSKPHPETIEEELNEKSELCEKEKVSSMSPEASSLKNQLGVNQSEENSIDQ
SPSHSAKETSAPKGKDVEERRKLRRLEQAGIKVMSAAQRYGSKKPVCEDNGSTPNIILRK
DNPFMTHYQGKDSGSEDEAASRVPDLEKDDFATRRARMNQPKHIVPFNSFLVGPYTSKEE
GKLEDVKKPLQMEKKEHARRRRVHMASVRQAVTSKEDPLLQNEKTESEEEQQVKELDNER
DDLAKRKSQSILPQLQEDAFFVGASITKADLETWKRLKLSGEPSEEGFRCSSSTPLPTDT
TVKAVAHDDFAVRKTRANRKAGSPKQKFVHFGPVTEIDQQKWDKLVIGRASSKSGRGEES
KKDSVESLSGVESSPSTTVASLGFAESSSEVSEPENESRYFEGGIKSDTDDSCRRIPSPV
PASDVISEEQTPWSLSKQQESTKEECDRNLPDIERDDMLVRRMGIFPRRTTSSIPINYPP
LSVAPYLLQQQQEEAVAREKDLKTLQERESTFTQEESPEQLEIPQLQSDGTENKMKFPDP
QRDDMLARRTGAFLKQPGPSVKQFLPMPFSKQQNKQGTATELEKKTTRPEKCPQVYSNSS
GKPSIEPPQEQQQGQEDSLPPTGQDEITGTAHTAQMAENDNNEVHVGQTSKLQEVAEENK
MGTLSSKDEHLQTFGPRTAVSDDAESMSMFDMRCEEEAVAQPHSKARHEKLQNIHNQLKE
DETRWQDDLARWKSRRRSASQDLIKKEAERKKMERLLAGDGTNERRKSIKTYREIVEEKE
RRERELHEAYKNAKTQEEAESILQQYTERFTISEAVLERLQMPKILERSHSVEPNSPLKD
PNPLRYLRQQSLPAPKFTATIEATIVPTTELEPSSSTGRTSPSKSVSKAVPMLTPKPYSQ
PKNTQEVLKNFKVDGKVSMNGENVNDMEEKDKECTTVVFTPSPTRSLKFDGVARGDKPPV
ELKKDPPSVELSLQRPATQSVHKEPTASPVELDGADSLQAEPSPSSATPAPPECPSPDQK
QFKSTAACSSPVVKRLEFFPSPVPLEETASSKKDVKKVEIEPQKEAELPSTQEVIKAKPL
EEKGSVVLPFLKKLPETSQVTLHNSGLQADSDTVDKSNRSNFWSWDPEEERKRQERWQHE
QERLLQEKYQKEQYKLKEEWEKAQREVEEEERRYYEEERKIIEDTVVPFIVSSNSAELLS
SSSSTTEGNKTVNSTDSNSCPGEGKQKEVTKQKKLLWEQDSVSSLKSKESELWQEKRSGN
KALSGYPGTGILKGGSEQEHHVPVMDRSSPARLNLPLTQDENVSWSQQLLTKRSPQCAED
TGQRPFLGQSVGHQPSSAGEARRAGYHENFRSGPSSPCSPAALSQSPNRSVSGKKLCSTC
GLPLGKGAAMIIETLGLYFHIQCFRCGVCKGQLGDAASGTDVRIRNGLLNCNDCYIRSRT
AGQPTTL
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcctgggctggagctgggagaggttcagcctcctgccgagcccccccagcct
gagctggccttcaccgaggctcagaaatggatcgagcaagtgacgggcagaagttttggt
gagaaagattttcgttcaggattagaaaacggcattcttctgtgtgagttgctgaatgcg
ataaagccaggattggtaaaaaagatcaatagactaccgacccccattgcaggtttggat
aatatcatattattcttaagaggctgcaaagaactgggacttaaagaatctcagcttttt
gatcctggtgatctgcaggacacatcgaacagagtaaccgtcaagaacattgactatagt
aggaagctgaaaaatgtattagtcaccatttattggctagggaaagcagcaaacagctgc
acatcatatagtggatcaaccctgaacctgaaggagtttgaaggcttcctggcacaaatg
agaaaggaaacggaggatattgagagccccaagcgcagcattcgtgacagcggctatata
gactgctgggactctgaacgcagtgattccctctccccgcctcgccacggcagagatgat
tcctttgacagtctggactcctttggctcccgctcgcagcagacaccgtctccagatgta
gtgctcagagggagtagtgatgggagaggaagtgactcagaaaccgacctgccacacaga
aagatgccagatgtgaaaaaagatgatatgttggcgaggcggacctcacatggtgaacct
aaatcagctgtgccttttaaccagtacctcccaaacaagagtaatcagacttgctatgta
cctgctccgcttcggaagaagaaagctgaacgagaggagtaccgaaagagctggagcaca
gcgacgtctccgctcggagacagacctttcagcaaaccccaccctgaaaccatagaagaa
gaactgaatgaaaaatcagaactgtgtgaaaaggagaaagtgagctccatgtctcctgaa
gcaagctcccttaaaaatcaattaggtgtgaatcaaagtgaagaaaactccatagatcag
tctccttcacatagtgcaaaagaaacatcagcacccaaggggaaagatgtggaagagagg
agaaagttaagaagacttgaacaagctggtattaaggtcatgtcagcagcccagcgctat
ggcagtaaaaagccagtatgtgaagacaatggaagcaccccaaatatcatccttcgcaag
gacaaccccttcatgacacattatcaaggaaaggattctggttcagaagatgaagcagcc
agcagagttcctgatttagaaaaggatgattttgccacccggcgagccagaatgaatcaa
cccaagcacatagttccatttaactcctttttagttggaccttatacaagtaaagaggaa
ggtaaactggaagatgttaaaaagccattgcagatggaaaaaaaggaacatgcaagaaga
agacgggtgcacatggcatcagtaaggcaagcagttacaagcaaagaggacccacttctg
caaaatgagaagactgagtcagaggaggaacagcaggtgaaagagcttgataatgagaga
gatgatttggcaaaacggaaatctcaaagcatccttcctcagctacaagaagatgcgttt
tttgtcggtgcctctataacaaaagcagatctggagacctggaaaagattgaaactgtca
ggggagcccagtgaagaaggtttcagatgttccagcagcactccgctaccaactgatacc
acggtgaaagcagtagcccatgatgattttgctgtccgcaaaaccagagcaaacagaaag
gctggtagccccaagcagaagtttgtgcattttgggccagtaactgagattgatcaacag
aagtgggacaagctcgtcattggcagagcttcatccaagagtggaagaggagaggaaagc
aagaaagacagtgtggaaagtctctctggtgttgaaagctctccttcaaccacagttgcc
agtcttgggtttgctgaatccagcagtgaagtatctgagccagaaaatgagtccaggtat
tttgagggaggaatcaagtcggatacagatgactcttgcaggagaattccatctcctgta
ccagcttctgatgtcatctctgaggaacaaaccccatggagtttgagcaaacagcaagaa
agtactaaggaagaatgtgacaggaatttaccagatatagagagagatgatatgttggtt
agaaggatgggaatttttccgaggcgtaccacaagctccattcccataaattatcctccc
ttgtcagtagctccttatctgctgcagcagcagcaagaggaggctgtagctcgtgaaaag
gatttgaagactctgcaggaaagagaaagtactttcacacaagaagagagcccagaacag
cttgagatccctcagctgcagagtgatggaacagaaaacaaaatgaaatttccagaccct
caaagagatgacatgttagccagaagaactggagcttttcttaaacagcctgggcccagt
gttaagcagttccttcccatgccattttcaaagcagcagaataagcagggcacagctaca
gaacttgagaagaaaaccacgaggcctgaaaaatgtccacaagtctacagtaatagctct
ggaaaaccttcaatagaaccaccacaagaacagcagcaaggacaagaggacagtcttcca
cccacaggacaagatgagattactggtactgcccatactgcccaaatggctgaaaatgac
aacaatgaagtccatgttggtcaaacatctaagcttcaggaggttgctgaggaaaacaaa
atgggaacactttcatccaaggatgagcatctgcaaacattcggccccagaactgctgtg
tctgatgacgcagagagtatgagtatgtttgacatgagatgtgaagaagaagctgtggct
cagcctcatagcaaagctcgccatgagaagctgcagaatatacacaaccagctgaaagag
gacgagaccagatggcaagatgacctggctcggtggaagagtcgtcgaaggagcgcttca
caggatttgattaaaaaggaagctgagagaaagaaaatggagaggttattggctggagat
ggaacgaatgagcgcagaaaaagcatcaaaacctaccgagaaattgtggaggagaaagag
agaagggagcgggagcttcatgaggcatacaagaatgcaaagacacaggaggaggctgag
agcatcctccagcagtacactgaaagattcactatcagtgaggctgtccttgagcgtttg
cagatgccaaaaattctagaaagaagccattcagtggaaccaaattccccactgaaagac
ccaaatcctctgagatatttaaggcaacagtcacttcctgctccaaaattcactgccaca
attgaagcaaccattgttcccaccactgaactagagcccagcagttcaacaggacgcaca
tctcccagcaaaagtgtctccaaggctgtgcctatgctgacacccaagccttattcacaa
cccaaaaatacacaggaagttttaaagaactttaaggtagatggaaaagtcagcatgaat
ggagaaaatgtcaacgacatggaagaaaaggataaagaatgtacaacagtagtatttact
ccttcaccaaccagatctctgaaatttgatggagtagccagaggggacaagcccccagta
gagttgaagaaggaccccccaagtgttgagctcagtttacagaggcctgccactcagagt
gtgcacaaagagccaacagcctccccagtggaactggatggagctgacagcctgcaagcc
gagcccagccccagcagtgcgacacctgcccccccggagtgcccgtccccagatcaaaag
caattcaagtcaactgcagcttgttccagccctgttgtgaagagattagaattttttccc
agtcctgtccctttagaggaaactgcttcaagcaagaaagatgtaaagaaagttgaaata
gagccgcagaaggaagcagagctcccttctacacaggaggtgattaaagcaaaacctctg
gaagaaaaggggagtgtggtgctgccatttttaaagaaactgcctgaaaccagtcaagtt
actctgcataactctggtctacaagctgattctgatactgttgataaatcaaatcgttcc
aatttttggtcctgggatccagaagaagagcgaaagcgccaggaaaggtggcagcatgag
caagaacgcttgcttcaggagaagtatcagaaggaacagtacaagctgaaagaggaatgg
gaaaaggcccagagagaagttgaagaggaggagcgtagatactatgaggaggaacgaaag
ataattgaggatactgtagttccattcattgtttcctcaaactctgctgagctcctctcc
tcttcttcctctaccactgaaggaaacaagacagtgaactcaactgattcaaacagctgt
ccaggggaaggcaagcaaaaagaagttacgaagcaaaaaaagctgctctgggagcaggac
agtgtgtcatctctgaaaagcaaggaaagtgaactctggcaagaaaagaggagtggaaat
aaagcactctcaggatacccagggactggtatcttgaaaggaggaagcgaacaggagcac
cacgtgccagtgatggatcgcagctcacctgccagactgaatctgccactgactcaggat
gagaatgtctcctggagtcagcagctgctgacaaagcgatctccacagtgcgcagaggac
actgggcagaggccgttcctgggccagtctgtgggacaccaaccaagctctgcaggggaa
gcgaggagggcaggctatcatgagaacttccgatctgggccgtcatctccctgctctcct
gctgctctgagtcagtcacccaacaggtctgtcagcgggaagaagctttgttctacctgt
ggtctccctcttggaaaaggagctgccatgattattgaaacactcggtctttatttccac
attcagtgcttcaggtgtggcgtttgcaagggccagctgggagatgcagcaagtggcaca
gatgtcaggattagaaatggtctccttaactgcaacgattgttatatccgatccagaact
gctggacagccaactacattgtga
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integrated database retrieval system
