Lonchura striata (white-rumped munia): 110476236
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Entry
110476236 CDS
T05897
Symbol
USB1
Name
(RefSeq) U6 snRNA phosphodiesterase 1
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsr03041
]
110476236 (USB1)
Spliceosome [BR:
lsr03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
110476236 (USB1)
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Gene cluster
GFIT
Motif
Pfam:
HVSL
Motif
Other DBs
NCBI-GeneID:
110476236
NCBI-ProteinID:
XP_021396717
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Position
11:complement(6553220..6558607)
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AA seq
491 aa
AA seq
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MPPSPTELTLTKRGLALTDEPAGEASRPNGERRLCPSQGRAIPTLAYRGLSAGTRVGASS
SLTHPSVGGGKRQPFRERGRERRGTFKLARRPARHGPAAGAGPGPPQGRGARGRPRSSQA
TGSRRRRSPRPGPARRSPLPIGRPRWQRGDDAPRPSPPPPRGEAPRRGRVSGAAARPGPP
PPRRGAHKGRRRRSGRSPAAGGGLAGGRAAACALRPSPALAWRGPPGPGGCGGVVAAGAR
GRWRERAAFLFLLFLLLTPLRSRSAGRPRLPAPAGLPGDPDPEEAVSDDSSRHGGRVRGF
PHERGNWATHVYLPYIAQEEFLELLELLVSRARTYVPSLAAMEEFHLSLSQCVVLRYHWI
EPFVRSLRERLAAFHRFFCVADQVKVYTNQNKTRTFIGLEVSAGHFQLLELVSEVDGVLE
EFDLPTFYKDPSFHISLAWCVGDLSGRLEGQCLRELQNIVDGFEESALLLRIQWEQIRCK
SGNKYFSFPLR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcctccttctcctacagagctcaccttgacaaagcgagggctcgcattgacggatgaa
cccgccggcgaagcatcccggcctaacggggagcgaagactgtgcccctcgcagggaaga
gcgataccaaccttggcttaccgagggctcagcgcggggacccgcgtcggcgccagctcc
agcctaactcatccctccgtgggaggtgggaagcgacaaccatttagggagcgcggtcgg
gagcgcagaggtactttcaaactggcgaggcggcctgctcggcatggcccggccgctggc
gccgggcccgggccgcctcagggccgcggggcgcgggggcggccgcggagctcgcaggcc
accggcagccgccgccgccgcagcccgcggccaggcccggcccgccgctcgccgctcccc
atcgggcggccccgctggcagcgcggggacgacgccccgcggccttcgccgccgccgccg
cgcggggaggccccgcggcggggtcgggtgtcgggggccgccgcccgcccggggccgccc
ccaccccggcgaggcgcacacaaagggcggcggcggcggtcgggccgctcacctgcggcg
ggaggaggcctcgccggcggcagggccgcggcctgcgcgctgcgcccgagccccgcgctg
gcgtggaggggccccccggggccaggtgggtgcggcggggtggtggcggcgggagcgcgc
gggaggtggcgggagcgcgcggccttcctcttcctcctcttcctcctcctcaccccgctc
cggtcccgcagcgccggccgcccccgcctgcccgcgcccgccggcctgccgggagacccg
gacccggaggaggccgtgagcgatgacagctcccggcacggcggccgcgtgcgcggcttc
ccccacgagcggggcaactgggccacgcacgtctacctgccctacattgcccaggaggaa
ttcctggagctgctggagctgctggtgtcccgcgcccgcacctacgtcccgtcgctggct
gccatggaggagttccacctgagcctctcgcagtgcgtggtgctgcgctaccactggata
gagcccttcgttcgctccctcagggagcgcctggccgccttccacaggttcttttgtgtg
gctgaccaagtgaaagtttacaccaaccagaacaaaaccaggacctttattggcttggag
gtctctgctgggcatttccagctgctggagctggtctcagaggtggacggtgttctagag
gaatttgaccttcccacattctacaaggacccatcgttccacatcagcctggcctggtgt
gtcggggacctgtctggcaggctggaagggcagtgtctgcgggagctccagaacattgtg
gatgggtttgaggagtcagcactcctgctgcgtatccaatgggagcaaatccgctgcaag
tcagggaacaagtacttctccttccccttgaggtag
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