Lonchura striata (white-rumped munia): 110476272
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Entry
110476272 CDS
T05897
Symbol
RFWD3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110476272 (RFWD3)
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110476272 (RFWD3)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110476272 (RFWD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Beta-prop_WDR5
zf-RING_UBOX
WDR55
zf-rbx1
zf-RING_5
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_THOC3
EIF3I
zf-RING_11
CALCOCO1
Nairovirus_Gn
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Rtf2
zf-C3HC4_4
zf-UDP
zf-RING_Vps41
Beta-prop_RIG_2nd
NBCH_WD40
CFAP43_N
WD40_2
zf-Nse
WD40_Prp19
Beta-prop_RSE1_2nd
DUF7837
Motif
Other DBs
NCBI-GeneID:
110476272
NCBI-ProteinID:
XP_021396761
LinkDB
All DBs
Position
11:complement(8117302..8138344)
Genome browser
AA seq
750 aa
AA seq
DB search
MAQEEMEVDLQPVAGYSVETLQTLPPEPSAHTALSSHVPVLGEGGGSAAALPAEDAVVTA
SAGAGEAPAEPDLQTGPATAPSGQQRLQGTLDQYQPLPVPQLTQHPPVRRARRQQRIGGS
QRTISARAALDHYFQVSRTQEPSAGPVPHPEFPTIVRDTQAQHPVETIEVSDSDSSTSEE
AEETVEAAAPLLPSAQETPPAAGSGVSSQVQAEPSQALSQASAEHENHEDEPEVQQKQTT
PLKKLESSVPVAHQDEEEGDTCAICFEQWTNAGDHRLSALRCGHLFGYTCIERWLKGQAG
KCPQCNKKAKRSDIVVLYARTLKALDTSEQERMRSSLEKEQILRRQAELESAQSRLQLQV
LTGECRKLRKQVQELKALVAQYNVSTLQQPGSSHTCLPSSLPSSQSQRKYHLEKVFLVSQ
TGNCRVMAYCDSLSCLVVSQPSPQSTFIPGYGVKMMSLANLKSSQYIPIHSKQIRGLAFG
TRADGLLLSAALDNTLKLTSLATNTVVQTYNAGRPVWSCCWCLDDTNYVYAGLVNGSIMI
YDLRDTNSHVQELVPQKSRCPMVSLSYLPRMASASLPYGGILAGTLEGACFWEQKAGNSY
QPHHLPLEPGGCIDLQTEINTRHCLATYRPGKNNPCMHCVMMELTCSPLTEGSEDVVCSS
NPVQTFSAGPTCKLLTKSAIFQSPEDDGSVFVCAGDEASNSALLWDAGSGSLLQRLPADL
PVLDICPLEVNQSHLLATLTEKMVKIYKWQ
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagaagagatggaagttgatctccaaccagtggctggttactcagtggagacc
ctccagacactccccccggagccctctgctcacacagcgctctcgtcccacgttcctgtg
ctcggggaaggaggaggcagcgctgcagcccttcctgctgaggatgctgttgtcacagcc
agtgcaggtgcaggggaagcacctgcagagcctgacctgcagacgggtcctgccacggcc
cccagtgggcagcagaggctacaagggacgttggatcagtaccaaccactgcccgtgcca
cagctcacacagcacccgccagtgaggagagctcgcaggcagcagagaattggtggttcc
cagaggacaatcagtgccagggcagcattggaccattactttcaagtcagtaggacccaa
gagccatctgcagggccagttccacacccggagttccccactattgtgagggatacccag
gcacagcacccagtcgagacaatagaagtgagtgactctgacagcagcacttctgaagag
gcggaggaaacagtggaggcagcagcaccactgttaccatcagcccaggagactcctcca
gcagcaggctcaggagtttccagtcaggtccaagcagaaccatctcaagctttgtctcaa
gcttctgcagaacatgaaaatcatgaagatgaacctgaagtccagcaaaagcaaacaact
ccattaaagaaactggagtcatcagttcctgttgcacatcaggatgaggaggaaggagat
acctgtgcgatctgctttgagcagtggaccaacgctggggaccaccgcctgtctgcgctg
cggtgtgggcacctctttggctacacctgcattgagaggtggctcaagggacaggcaggg
aagtgtcctcagtgcaataagaaggccaagcgttccgacatcgtggtcctgtatgcccgc
acgctgaaagcgctggacaccagtgagcaggagcgcatgagaagctctttagaaaaggag
caaatattgcggagacaggcagagctggaatctgcacagagccgtctccagctccaggtt
ctgacaggtgaatgcagaaagctccgcaagcaagttcaggagctgaaggctctggtggcc
cagtacaatgtgagcactttgcagcagcctggcagctcccacacctgcctcccaagcagc
ctcccttccagccaaagccagcgcaagtaccacttggaaaaggtttttttggtgtctcag
actggcaactgcagagtgatggcatactgtgactcactgagttgtcttgtggtatcacag
ccttctccacagtctacctttattcctggctatggtgttaagatgatgagcttggccaac
ctgaagagcagtcagtacatccccatccacagcaaacagattcggggcctggcctttggc
actcgagctgatggtttgctgctctctgctgccctggacaacactctcaaactcaccagc
ttggcaacaaacactgtggtgcagacatacaatgctggccgtcctgtgtggagctgctgc
tggtgtcttgatgatacaaactatgtctatgctggattggtcaatggctctatcatgata
tatgatctgagagacacaaactctcatgtccaagaactggttcctcagaagtcaaggtgc
cccatggtgtcgctgtcctacctgccccggatggcctcagcgtcgctgccttatggtggg
atattggctgggaccttggaaggagcctgcttttgggaacagaaagctggcaactcctac
cagcctcatcacctgcccctggaacccggaggttgcatcgatctccaaacagagatcaac
acgcggcactgcctggcaacgtacaggcctggtaaaaataacccatgtatgcattgtgtg
atgatggaactgacttgcagcccactgacagaaggctcagaagatgtggtgtgttcttct
aacccagttcagactttcagtgctggtcccacttgcaagttgctgaccaaaagtgccatt
tttcagagcccagaggatgatgggagtgtctttgtgtgtgctggtgatgaggcatccaat
tctgctctgctctgggatgctggaagtggttccttgcttcagaggctgccagctgacctg
cctgtgctggatatctgccccttggaagtgaaccaaagccacctcttggctactctgaca
gagaagatggtgaagatctataaatggcagtga
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