Lonchura striata (white-rumped munia): 110476277
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Entry
110476277 CDS
T05897
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110476277 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsr03021
]
110476277 (SF3B3)
03041 Spliceosome [BR:
lsr03041
]
110476277 (SF3B3)
03036 Chromosome and associated proteins [BR:
lsr03036
]
110476277 (SF3B3)
Transcription machinery [BR:
lsr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
110476277 (SF3B3)
Spliceosome [BR:
lsr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
110476277 (SF3B3)
Complex B
110476277 (SF3B3)
Complex C
U2 SnRNP specific factors
110476277 (SF3B3)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
110476277 (SF3B3)
TFTC complex
110476277 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
110476277
NCBI-ProteinID:
XP_021396773
UniProt:
A0A218V6J2
LinkDB
All DBs
Position
11:complement(7934539..7962993)
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AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacctaacgttgcagcgtgccacaggcattagctttgctatccatggc
aatttctcaggaaccaaacaacaagaaattgttgtttcccggggcaagatcctggagtta
ctccgtcctgatcccaacacggggaaggttcacactctgctgaccgtggaagtgttcgga
gtcatccggtccctcatggccttcaggctgacaggggggaccaaggactacatcgtggtg
ggcagcgattcggggcgcattgtcattctggagtaccagccctccaagaacgtctttgag
aagatccaccaggaaacctttggcaagagtggatgtcgcagaatcgttccgggccagtac
ttggctgtggacccaaagggccgtgccgtcatgatcagtgccattgaaaagcagaagctg
gtgtatatcctgaacagagatgctgctgctcgactcaccatttcctccccactggaagcc
cacaaggccaataccttggtctaccatgtggtgggagttgatgtggggtttgaaaaccca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaacaggtgaagct
gcagccaacacacagcagacattgacattttatgaattggacttgggtttgaaccatgtt
gtcaggaaatacagtgagcccctggaagagcatggcaacttcctcataacagttcctggt
ggttctgatggccccagtggggtgctgatctgttctgaaaactatattacttacaaaaac
tttggtgaccagcctgatatcagatgcccaattcccaggagacggaatgacttggatgac
ccagagaggggtatgatctttgtctgctctgctacacataagaccaagtctatgttcttc
ttcctggcccagacagagcagggagacatcttcaaaattactctggagactgatgaagac
atggtaacagagattcgactgaagtactttgacactgttcctgttgctgctgccatgtgt
gtgctgaaaacagggtttctctttgtggcatctgaatttggaaaccattacctgtaccag
atagctcacctgggggacgatgatgaggagcctgagttttcctctgccatgcctcttgag
gaaggagacacattcttttttcagcctcgacctctgaagaacctggtgttggtggatgag
ttggacagtttgtctcctattctgtgttgtcagatagcagatttggccaatgaagacaca
ccccagttgtatgtggcttgtggtcggggtcccaggtcatccctgagggttttaagacat
ggacttgaggtatctgaaatggctgtctcagagctgcctggtaacccaaatgctgtatgg
actgtgaggagacatgttgaagatgaatttgatgcctacattatcgtgtccttcgtaaat
gccacactggtgctgtctatcggagagactgtagaagaagtgactgactctggattcctg
ggtactacaccgaccttgtcctgctctcttcttggtgatgatgctttagtacaggtttat
ccagatgggatccggcacatccgagcagataaaagagtaaatgaatggaagacaccaggg
aagaaaaccattgtaaaatgtgctgtgaaccaaagacaagtagtgatagcactgactgga
ggagaactggtttactttgagatggacccgtcaggacagctgaatgagtacacggagaga
aaggagatgtcggctgatgttgtttgcatgagcctggccaatgttccccctggggaacag
cgttcccggttccttgctgttggactggtggacaacactgtcagaattatttcacttgac
ccttcagattgtttacagcccctgagtatgcaggcactgcctgcacagcccgagtcgttg
tgcatcgtggagatgggtggcacagagaagcaggatgagctgggagagaggggctccatt
ggctttctgtacctgaacattggactgcagaacggtgtgctgctgcggaccgtcctggac
cctgtcactggcgatctctccgacaccaggaccagatacctcggctcccggcctgtcaaa
ctcttccgtgtccgaatgcaaggccaggaggcggtgctggccatgtcaagccgttcctgg
cttagttattcctatcaatcacgcttccacctgactcccttgtcttatgagacactggag
tttgcatctggttttgcttctgagcagtgccctgagggcattgtggccatctccacaaac
acattgaggattttggcactggagaagctgggagcagtcttcaaccaggttgccttcccg
ttgcagtacacaccccgaaaatttgtcattcatccagagagcaacaacctgatcatcatt
gagacagaccacaacgcttacactgaggccaccaaggcacagaggaagcagcaaatggct
gaggagatggtggaggctgcgggtgaggatgagagggagctggctgcagagatggctgca
gcctttctgaacgagaatcttcccgagtccatctttggtgctcccaaggcagggaatggt
cagtgggcctctgtcatcagagtgatgaaccccatccagggaaatacattagatctggtc
cagctggagcagaatgaagctgctttcagcgtggctgtgtgccgcttctccaacactggt
gatgagtggtacgtgctggtgggagtcgccaaggacctgattctgaacccacgctcagtt
gctggggggtttgtctacacatacaagctggtgaatagtggtgagaagctggagtttctg
cacaagacccctgtggaggaggtccctgcagccattgctccattccaaggccgagtctta
attggagttggaaagctcctgcgtgtgtatgacctgggcaagaagaaactgcttcggaaa
tgtgagaataagcacattgcaaactacatctgtggcatccaaaccattgggcacagagtg
attgtttcagatgttcaggaaagtttcatctgggtgcgttacaaaaggaacgagaaccag
ctcattatctttgctgatgacacttacccccggtgggtcactacagcaacactcctggat
tatgacactgtggctggagcagacaagtttggtaacatctgtgtggtgagattgcctccc
aacaccaatgatgaagtagatgaggatcccacaggcaacaaagctctctgggacaggggc
ctgctcaatggagcatcacagaaggctgaagtgattatgaattatcacgtgggagaaacg
gtgctttccttgcagaagaccacactgattccaggaggctctgaatctcttgtttatacc
accttatcaggggggataggaatcttggtcccttttacttcccatgaggatcatgacttc
ttccagcatgtggaaatgcacttacggtctgagcaccctcctctctgtggacgagaccat
ctcagtttccgctcctactacttcccagtgaagaacgtgattgatggggacctgtgtgag
cagttcaactccatggagcctaacaaacagaagaatgtggctgaggagctggaccggacc
ccacccgaggtgtccaagaagctggaagacatccgcacgcgttacgctttctga
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integrated database retrieval system
