Lonchura striata (white-rumped munia): 110476420
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Entry
110476420 CDS
T05897
Symbol
HMBOX1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110476420 (HMBOX1)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
110476420 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_24
CUT
HTH_37
HTH_26
HTH_31
HTH_23
Motif
Other DBs
NCBI-GeneID:
110476420
NCBI-ProteinID:
XP_021397005
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All DBs
Position
3:106470862..106576838
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AA seq
455 aa
AA seq
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MLRTFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTRHEILHALETLDRLDQEHSDK
FGRRSGYGGGSYGNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNGRE
SNERLSAFNGKMSPTRYPLANSLAQRSYSFEASEEDLDIDDKVEELMRRDSSVIKEEIKA
FLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMR
PAPIPIEEPEWRQTPPPVTATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREE
IANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPG
GHSNSDDVDGNDYSEQDTWQVRNGEEEGRCSEGGREAEKVEEDRRICSKQDDSTSHSDHQ
DPISLAVEMAAVNHTILALARQGANEIKTEALDDD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctcagaacttttccagtagtcctgctggaaaccatgtctcactacacggacgagcca
agattcaccatcgagcagatcgacctcctgcagcgcctgagacgcacgggaatgaccagg
catgagatcctgcacgccctggagaccttggaccgtctggaccaagagcacagcgacaaa
ttcgggaggagatctggctacggaggcggctcctacggcaacagcaccaacaacgtgccg
gcgtcctcctcgacggccacggcttccacgcagacccagcactccgggatgtccccgtcc
ccgagcaacagttacgacacctccccacagccttgcactacgaatcagaacgggagggag
agtaacgagaggttgtctgccttcaacgggaagatgtcgcccactcgctaccccctggcc
aacagcctggcccagaggtcctacagcttcgaggcttccgaggaggacttggacatcgac
gacaaagtggaggagctgatgaggagggacagcagtgtgataaaggaggaaatcaaagcc
ttcctcgccaaccggagaatttcccaagcagttgttgcacaggtaacaggtatcagtcag
agccggatctcccattggctgttgcagcaggggtcggacctgagtgaacagaagaaaagg
gcattttacagatggtaccagcttgagaagacaaatcctggggctacactaagcatgaga
cccgctcccatcccaatagaagagccagaatggagacagacgcctcccccagtcacagct
acctctgggaccttcagactacggcgaggcagtcggttcacgtggagaaaggagtgccta
gctgttatggagagttacttcaatgagaatcaatatcccgacgaggcaaagagagaagaa
attgccaacgcctgtaatgcagttatacaaaaaccaggaaaaaagttgtcagatttggag
cgagttacctccctcaaagtgtacaactggtttgccaacaggaggaaggagatcaagaga
agagccaatatcgaagcagcaatcctggagagccatggaatagatgtacagagtccagga
ggtcactccaacagcgacgacgtggacggcaacgactactcagagcaggacacttggcaa
gtacgcaacggggaggaggagggacgatgttccgagggaggcagagaagcagagaaggta
gaagaagacaggaggatctgctccaaacaagatgacagcactagccatagtgaccaccaa
gaccccatttccttagccgtggagatggcagcagtcaaccacaccatcctggcgctggcc
cggcaaggagccaacgagatcaagacagaggctctggacgacgactga
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