Lonchura striata (white-rumped munia): 110476481
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Entry
110476481 CDS
T05897
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110476481 (LRBA)
Membrane trafficking [BR:
lsr04131
]
Endosome - Lysosome transport
Others
Others
110476481 (LRBA)
Endosome - Golgi transport
110476481 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
110476481 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_IFT140_1st
SUKH_6
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
110476481
NCBI-ProteinID:
XP_021397145
LinkDB
All DBs
Position
4:12493337..12856864
Genome browser
AA seq
2857 aa
AA seq
DB search
MASEGKQVVQPTGDDGGGGAGKGGNGAEGGSVLQPLNPGVPIRGIRMKFAVLTGLVEVGE
VSNRDIVDTVFNLLVGGQFDLEMNFIIQEGEGITCMVDLLDKCDTTCQAEVWSMFTAILK
KSIRNLQACTEVGLVDQVLRRINRADNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGE
KGRWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRM
DPVNNINVDKDKPYLYCFRTNKGLGYSAHFVGSCLIVTSIKSKGKGFQHCVKFDFKPQKW
YMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCG
QMTSVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLDEHHKLLLYDGKLSSAIAF
MYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSALHSIGGVQVLFPL
FAQLDYRQYSSDHIDTTVCSTLLAFIMELLKNSIAMQEQMLSCKGFLVIGHSLEKSSKAH
VTRAVLELCIAFSKYLSNLHNGVPLLKQLCDHVLLNPEIWIHIPAQVQLTLYTYLSTEFI
ATVNIYGAIRRVGTVLLVMHTLKYYYWVVNPQDRSGITPKGIDGPRPTQKEILSLRAFLL
MFIKQLVTKDYGIKEDELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPGSMIPAFDQRN
GLQVVYKLLASQSEGIRVQALKVMGYFLKHLSPKRKAEVMLGHGLFSLLAERLMLQTSLF
TMTTYNVLFEILTEQICTQVIHKQHPDPDSTVKIQNPSILKVIAILIRNCPQCPETLEVR
RAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCCFNPKTSEEQKITEMVYTIFRILLY
HAIKYEWGGWRVWVDTLSITHSKVTFEMHKESLSQMYKEFQEKGGEGSGICSSTPIRTIS
GISKEAETKGEQQSLELKENADVPSCITDGDTECKTEKNEKENSSDGGKQTHSVSNRKEE
LEGEDMGTTEDLKAVPCVEFSAEPETIKLSVSEISTGIAEAIEDSNKADELVEETVAATA
ASLAVQTPVEGGTPTSPEKLQKSAVEVEDEDGFVDLKDESSLPLSSEELAVRNKECGSNA
SEVTRQEETTEKQPETGLLKSEGTEGVDEKGQELTLPETVSSAVPEVVTQPDSAGKKKLK
EGSVVTSKTKTTVENINAHIAEPAGTSDKRIAKLDVSSVASDTERLELKANTCLEAPLPP
RSMPEPSRQQVSLGQELAAPSDGQRRDTRSAVFRIPEFKWSLMHQRLLTDLLFSIETDIQ
MWRSHSTKTVMDFVNSSDNVVFVHNTIHLISQVMDNMIMACGGILPLLSAATSATHELEN
IEPTQGLSVEASLTFLQRLINLVDVLIFASSLGFTEIESEKNMSSGGILRQCLRLVCAVA
VRNCLECQQHAQMKPIGETGKNQKAVQGFIGSGKSAAKSPVDIVTGGISPIRDHDRLLQD
MDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNERQPPNQSQSLKE
SENENNETPAAAMEKPSAALGASVSTEDSANTASMQRRDSGLGEEATLAQTNSSGGAAEA
GPVSVSAGPDAVSEVLCTLSLEVNKSQEGGSETGAEESKSVPSVPAAKNVNVKDILRSLV
STPADGTAVDAALLPPTFLGVLGDGAAEQPVQFHSFDRSVVVPTKKSSISSSTAAIGTPT
NAVSVVSSLDSAQAPDLSGESPGRGSSNSKLPSVPAVSSVPEDSASNMSITDRLEHALEK
AAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSI
QKNAGLAFIELVNEGRLLSQTMKEHLVRVANEAEFILSRQRAEDINRHAEFESLCAQYSA
DKREEEKMCHHLITAAKYRDQVTATQLIQKIINILTDKHGAWGSSAPNRPREFWRLDYWE
DDLRRRRRFVRNPLGSTHPEATLRAAGEHAPDEDILVKGKQSIKSQVLGNQNSDSEILLE
GDDDIMSFMEEREVENLTGPVSLSTPAQLVAPSVVVKGTLSITVSELYFEVDEEDPSFKK
IDPKILAYTEGLHGKWLFSEIRSIFSRRYLLQNTALEIFMANRVGVMFNFPDQATVKKVV
NCLPRVGIGTIFGLPQTRRISLASPRQIFKASNMTQRWQHREISNFEYLMFLNTIAGRTY
NDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGALNPKRAAFFAERYESWEDDQVP
KFHYGTHYSTASFALTWLLRIEPFTTLFLNLQGGKFDHADRTFSSIARAWRNSQRDTSDI
KELIPEFYYLPEIFVNSNNYNLGVMDDGTVVSDVELPPWAKTPEEFVRINRLALESEFVS
CQLHQWIDLIFGYKQQGPEAVRSLNVFYYLTYEGAVNLSSITDSVLREAVEAQIRSFGQT
PSQLLIEPHPPRSSAMQVYLLLQSPLMFTEQAQQDVIMVLKFPSNSPVTHVAANTQPGLA
TPAVITVTANRLFAVNKWHSLPAHQGAVQDQPYQLPVEIDPLIASNTGMHRRQITDLLDQ
SIQVHSQCFVITSDNRYILVCGFWDKSFRVYSTDSGKLMQIVFGHWDVVTCLARSESYIG
GNCYILSGSRDATLLLWYWNGKTNIIGDNPRGDFATPRAVLTGHDYEITCAAICAELGLV
ISGSKEGPCLIHSMNGDLLRTLEGPERLQGPESCLRPKLIQASREGHCVIYYENGLFCVF
SVNGRLQATMETDDKIRAIQLSRDGQYLLTGGDNGVVMVWQVWDLKRLFAYPGCDAGIRS
MALSYDQRCIMTGMASGSIVVFYNDFNRWHHEYQTRY
NT seq
8574 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgaaggcaaacaagttgttcagccaacaggtgatgatggaggaggaggagcg
ggaaaaggaggaaatggtgctgaagggggaagtgtgctgcagcctttgaatccaggagtc
cctatccgaggcatcaggatgaaatttgctgtgctgacaggactggtggaagttggtgag
gtgtccaacagagacatagtcgacactgtgtttaacctgcttgtcggaggccagtttgac
ttggaaatgaacttcatcatccaagaaggagagggcatcacctgcatggtggacttattg
gataagtgtgacaccacctgtcaggctgaggtttggagcatgttcacagcaatcctgaag
aaaagcatacggaatctccaggcctgcacggaagtgggactcgtggatcaagtgctcaga
agaatcaatagagctgacaacatgattgcagatctcttagtggacatgcttggtgtgttg
gctagctataacctgacagttcgagagctgaagttattcttcagcaagctgcaaggagaa
aaagggagatggccaccacatgctgggaagttactgtctgtgttaaaacacatgcctcag
aagtatggacctgatgccttcttcaactttccaggaaaaagtgctgcagctattgcctta
cctcctatagccaagtggccataccagaatggatttactttccacacttggctaagaatg
gatcctgtaaataatattaatgtggataaggataagccttatttatattgttttcgaaca
aacaaaggacttggttattctgctcactttgttggaagctgcttgattgtaacatccata
aaatcaaagggaaaaggtttccagcactgtgtaaaatttgatttcaagccacaaaagtgg
tacatggtgactatagtgcacatctataaccgctggaagaacagtgaactccgatgttat
gtgaatggggaactggcatcttatggggaaataacgtggtttgtcaacaccagtgatacg
tttgacaaatgtttcctgggttcttcagaaacagcagatgccaatcgagtgttttgtggg
cagatgacatctgtttacctttttagtgaggctctcaatgctgctcagatctttgccatt
tatcagcttggcctgggatataagggaacattcaagttcaaggcagaaagtgatctcttc
cttgatgaacatcacaaattgttgctatatgatggtaaactctccagtgctattgcattt
atgtacaatccaagggctacagatgcacagctgtgtcttgagtcatcccctaaggataac
ccttctatttttgttcattcaccacatgccctcatgctgcaggatgtgaaagcagtcttg
acgcactccatccaaagtgccctgcactccattggaggagtgcaggtgcttttccctctc
tttgcacaattggattataggcagtattcctcagaccacattgacacaactgtttgttct
actttactggcattcatcatggagttgttgaagaactctattgctatgcaagaacaaatg
ctttcctgtaaaggcttccttgtgataggacacagtctagaaaagtcttccaaagctcat
gttaccagagctgtgctagaactttgcattgccttctcaaaatacctgagcaatttacac
aatggggtgcccctgctgaagcagctgtgtgatcatgttctcctgaatcctgaaatatgg
attcatatcccagcacaggttcagctgaccctgtacacttacctgtctactgagttcatt
gccactgttaatatttatggagcaatccggcgggttgggacagttcttttggtcatgcac
accctcaagtattattactgggtggtgaaccctcaggatcgcagtgggataactcccaag
ggcatagatggtccacggcctactcagaaggagattttatccctgcgagcatttttgttg
atgttcattaaacagctagtcacgaaggactacggaataaaagaagatgaattgcaggct
atcctcaattacctgcttactatacatgaggatgacaatctaatggatgtcttgcagttg
ctggttgctctgatgtcagagcatcctggttctatgatccctgcatttgatcagaggaat
ggattacaggttgtctacaagcttttagcatcacaaagtgaaggcatcagggtccaagct
ctgaaagtgatgggatatttcttaaagcatctttctccaaagagaaaagcagaagtcatg
cttggacacggattgttctctttattggctgaaagactgatgcttcagacaagcttattc
accatgaccacatacaatgtcctgtttgagattctgactgaacaaatttgcactcaagta
atacataaacaacatcctgacccagattcaacggtgaagatacaaaatccttcgattttg
aaggttattgcaatcctgatacgtaattgtccacagtgtccagaaactctggaggtccgg
cgagcctttctctcagatatgattaaactgtttaataacagtagagaaaacaggaggagt
ttgttgcagtgctctgtctggcaggagtggatgctttccctttgttgttttaatccaaag
acttctgaggagcagaagataactgagatggtgtacaccatatttcggattttgctgtac
catgcaataaaatatgagtggggtggctggcgtgtatgggtggatacactgtcaatcaca
cattcaaaggtaactttcgaaatgcataaagagagtctttcccaaatgtacaaagagttc
caagagaaaggaggtgaagggagtggcatatgttcttcaactccaattagaacaatctct
gggattagcaaagaagctgaaaccaagggagaacaacagtctttggagttaaaagaaaat
gctgatgttccttcatgcattactgatggtgatacagagtgcaaaacagaaaaaaatgag
aaagaaaactcatcagatggtggcaaacaaactcattcagtgtctaatcgtaaggaggaa
ttagagggggaggatatgggtactacagaggatttaaaagcagtgccttgtgtggaattt
tctgcagaaccagaaacaataaagctcagtgtctcagaaatcagtactggaatagctgaa
gcaattgaagattctaataaagctgatgagcttgtggaagaaacagttgctgccactgct
gcttctttagctgtgcaaactcctgtggaaggaggaactcctacaagtccagaaaaactg
caaaaatcagcagtagaggtggaagatgaagatggctttgttgatttgaaagatgaaagt
agtttgcctttatcttcagaagagcttgcagtaaggaataaggaatgtggctctaatgca
agcgaagtgacaaggcaggaagaaacaacagagaagcaacctgaaactgggcttttaaaa
tctgagggtactgaaggtgtggatgagaagggacaagaactgactttgccagagacagtg
agttctgcagttccagaagtagtaactcagccagattcagcaggaaaaaagaagctgaag
gaaggaagtgtagttaccagtaaaaccaaaacaactgtggaaaacataaatgcacatata
gcagagcctgcaggaacctctgacaaaagaattgccaagcttgatgtttccagtgttgca
tcagatacagaaagactggagttgaaagctaacacatgtctagaagcacctttgccaccc
agatccatgcctgagccctcaaggcagcaggtttccttaggacaggagctggctgctcca
tcagatgggcagaggagggacacgaggtcagctgtgttccgtattcccgagttcaagtgg
tcactgatgcaccagcgcctgctcacagacctgctcttctccatagaaacagatattcag
atgtggagaagccattctacaaaaactgtgatggactttgtgaatagcagtgacaatgtg
gtgtttgtgcacaacacaatccacctcatctctcaagtgatggacaacatgatcatggct
tgtggtggtatcttgccattgctttctgctgccacatctgctactcatgaattggagaat
attgagccaactcaaggactttcagtagaagcatctttaacatttctccagagattaatc
aaccttgtggatgtactaatttttgcaagctctcttggtttcactgaaattgagtctgag
aaaaatatgtcatctggaggaattctgcgacaatgtcttcgtctggtatgtgcagtagca
gtaagaaattgcttggagtgtcagcagcatgcgcagatgaagcctattggagaaactggg
aagaaccaaaaagcagtacaaggctttataggatcaggaaagtctgcagcaaagagtcca
gtggacattgtgactggtggcatttctccaatacgggaccatgacagacttctgcaggat
atggatattaatcgcctccgagcagtagtgttcagagatatagaggatagtaaacaggct
cagtttttggctttggctgttgtatattttatttctgtactcatggtttcgaaatacaga
gatatactggaaccccagaatgaaagacaaccaccaaaccaaagccagtcactcaaggaa
tcagaaaatgaaaataatgagactcctgctgcagctatggaaaagccatctgctgctctt
ggtgcttcagtctctactgaagattcagcaaatacagcatctatgcaaagaagggattct
ggtcttggggaggaagcaactctagcacaaacaaacagttcaggtggtgctgctgaagca
ggacctgtgagtgttagtgcaggcccagatgcagtcagtgaagtcctgtgcacactttca
ttagaagtcaataaatctcaggagggcggaagtgagacaggagctgaagagagtaaatct
gtgccttctgtgccagctgcaaaaaatgtcaatgtgaaggacatcttgagaagcctggtg
agcacaccagctgatgggacagcagtggatgctgctcttctgccaccaacctttcttgga
gttcttggtgacggagctgctgagcaaccggtgcagttccattcctttgacaggagtgtt
gttgtaccaacgaagaaatcaagcatttcctcttctacagctgctattggtactcctaca
aatgctgtcagtgtggtttcttctttagattcagcccaagccccagatttgtcaggagaa
tctcctggaaggggatcatctaattcaaaattgccatctgttcctgcagtttcttcagtg
cctgaggattctgcctccaatatgagtattacagacagacttgagcatgctttggaaaaa
gctgcccctctcctgagagagatttttgtggattttgctccctttctttctcggactctt
ttgggcagccatgggcaggagttgctgatagaaggtacaagtcttgtgtgcatgaaatct
agcagttcagttgtggaactggtgatgctcctttgctctcaggagtggcaaaactctata
cagaagaatgctggcctggcctttattgagcttgtcaatgaaggaaggctgctgagtcaa
accatgaaggagcatctggtacgagtggctaatgaagcagaatttatcctgagcagacag
agggcagaggatattaaccgccatgctgaatttgagtcactgtgtgcccagtactctgca
gacaaacgggaagaagaaaaaatgtgtcatcatttgatcacagcagccaagtaccgggac
caggtgactgcaacacagctaatacagaaaattatcaacatcctgacagacaagcatgga
gcctggggaagctctgcaccaaatcgtcctcgtgagttctggcgcctcgactactgggaa
gatgacttgcggcgccggcgacgatttgtgcgtaacccccttggatcgacacatcctgaa
gcgacactcagggcagctggagagcatgctcctgatgaggatatacttgtcaaaggaaag
cagtccatcaagagtcaagttttaggaaaccagaactcagacagcgagattctcttggaa
ggtgatgacgatatcatgtcattcatggaggaaagagaagtggagaacttgacaggtcca
gtgtccctcagcacaccagctcagcttgtggcaccctccgtagtagtgaaaggcaccctt
tccatcactgtttctgagctctactttgaggtggatgaagaagatcctagttttaagaaa
atcgacccaaagattctggcatacacagaaggactccatggaaaatggctcttctcagag
attcgatctatcttttcccgacgttacctcttgcaaaatacagcgctggagatattcatg
gcaaatagagtgggtgtcatgttcaacttccctgaccaagcaacagtaaagaaagtggtt
aactgtctacctcgggttggtattggtaccatcttcggattaccccagaccagacgcatt
tctttggctagtccacgacagatcttcaaagcctccaacatgacccagcgatggcaacac
cgagagatttccaactttgaatatttgatgtttctaaacactatagcaggtcgaacttac
aatgatttgaatcagtaccctgtcttcccttgggttatcaccaactatgagtcagaggag
ttggaccttacacttcctagcaacttcagggatttgtcaaagcctattggagctttgaac
ccaaagagagcagcgttctttgctgagagatacgaatcatgggaagacgaccaggtccca
aaatttcattatggcactcattattcaacagcaagttttgcactcacgtggttgttaagg
attgaacccttcacaacacttttcctaaatctgcaaggtgggaagtttgatcatgcagat
aggactttttcgtctattgcaagagcatggcgcaacagtcagcgtgacacttctgacatc
aaggaactgattcccgaattttattacctcccagagatatttgtcaacagcaacaattac
aatctgggagtgatggatgatggaacagtggtgtctgatgttgaacttccaccatgggcc
aaaaccccagaagaatttgttcgcataaacaggctggctttagaaagcgagtttgtttcc
tgccagcttcaccagtggattgatctgatttttggctacaaacagcaagggccagaggct
gttaggtccctgaatgtattctactatctgacttatgaaggagctgttaatttaagttca
ataacagattctgtactgagagaggctgtggaagctcaaatacgaagttttggacagacc
ccttcccaactgctcatagaaccacatcctccaagaagttctgccatgcaggtgtatctc
ctcctgcagagccccttgatgttcacagagcaagcccaacaggatgttatcatggtcctg
aagttcccatccaactccccggtcactcacgtggctgccaacacccagcctggcctggcc
actcctgctgtgatcacagtcactgcaaacaggctctttgctgtgaacaagtggcacagc
ctccctgctcatcaaggtgctgtacaagaccagccttaccagctgccagtggaaatcgat
cctctcatagccagcaatacaggtatgcacaggaggcaaatcaccgaccttttagaccaa
agcattcaggtgcattcccagtgttttgtcatcacctctgataatcgttacatcttggtc
tgtggcttctgggacaagagtttccgtgtttactctactgactcaggtaaattgatgcaa
atagtgtttggccactgggatgttgtgacctgtctggctcgttccgagtcctacattgga
gggaattgttacatcctctcgggatcccgggatgcaaccttgctgctctggtactggaat
ggcaaaaccaacatcatcggtgataacccaagaggtgattttgcaactcctcgagctgtt
ctgacaggacatgactatgagatcacctgtgctgccatttgtgctgagcttggcctggta
ataagtggttcaaaagaaggaccatgtctcatacattctatgaatggagatctactgagg
acgttagaaggtcctgaaagactacaaggtccggaaagctgcctgagaccaaaacttatt
caagcttccagagaaggccactgtgtcatatattatgaaaatggcctcttctgtgtgttc
agtgtgaatgggagactgcaggccaccatggaaacagatgacaagataagggccattcag
ctgagtcgggatggacagtatctgctcacaggtggagacaatggggttgtcatggtctgg
caggtgtgggacctcaaacggctctttgcttacccagggtgtgatgctggaatccgatcc
atggccctgtcctatgaccaaaggtgtatcatgactggaatggcatctgggagcatcgtg
gttttttacaatgatttcaatcgctggcaccatgagtaccaaaccaggtactga
DBGET
integrated database retrieval system
