Lonchura striata (white-rumped munia): 110476634
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Entry
110476634 CDS
T05897
Symbol
GTF2I
Name
(RefSeq) general transcription factor II-I isoform X1
KO
K03121
transcription initiation factor TFII-I
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110476634 (GTF2I)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsr03021
]
110476634 (GTF2I)
03036 Chromosome and associated proteins [BR:
lsr03036
]
110476634 (GTF2I)
Transcription machinery [BR:
lsr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110476634 (GTF2I)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
110476634 (GTF2I)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTF2I
Motif
Other DBs
NCBI-GeneID:
110476634
NCBI-ProteinID:
XP_021397413
LinkDB
All DBs
Position
19:complement(3002123..3091590)
Genome browser
AA seq
1371 aa
AA seq
DB search
MAQLLAPATSIHDEEALESRMLVTFLMSGLESMCKELSKSKAEIACIGVYARNVFVIGTE
RGKAFVNSREDFKTDFIEYCVTEEDRPPKLQKTKTTPPVNRQTVDAEELEALRKSVEEFF
CSLYGKALGKPAAVPVTFEEIQRNQSVVIVQGLPEGVTFKHPSNYDVSTLKWILENKSGI
TFSINRPFLELRKHVGADMTDPSHSVTRPRESCPPVNVKTEPSKDSETNKDHGIPSKMSE
VTMKQERDDPNYYQFNTPAGPSKTSEIDEKIAPGKSYTESAQPDSSETSDNSEDDVDDGD
YNNDGDEYLPSEGSRRSPGLTTEAASTGGRNAQEFNFKSSHHDMLETSEKPEVEVTLEED
DDDYLPPDKRLKSTKSATEVANTGRRNAEEFNSDSSQHDSSEASEDSEAEITSQDDDDDD
EYLPSSKRKRRRTRNTRSTKEVANNRRRKAKYVKSDSSRHDMSEISENPEVEVTVEADED
YYMPSDKRQRTTDSANDNASAERRNAEEFNCDTSRHDMLEISENPEVEVTVEVSKFKAVP
VLHASSMDKKTGGFLLFLKDDDDNYLPPDKRLKSNNLANESADIESRKEEEFISDTSRHD
MSETNENPEVEVTLEDTDQPYAYRNKRRRSTQLVNEESNSQSRKAEEFNSDSSQHDSSEA
SEVSEAELSSEDNDDDYLPHERRQRSPKSANSSGDSGRSKGTQFNFDRWNSRITDLRTEV
EELFEKKYAEAIKAKGPVSIPYTNFLSHPEDLYVEGLPDGIPFRRPATYGIPRLERILLA
KDRIQFVIKKPELLNSTEAPEANTVSTVSYTVKEDWHSRVTKLRMTVDQLFCKLYGKALG
SNEPKAVPYKKFEAHPTDLYVEGLPDNISFKSPSRYGIPCLEQIIQMGDRIKFVIRRPEL
LNHSSNEVIQPRSNPTAREDWNSKITKLRKQVEDIFSKKFAKALGLSVSESVKVPYSVFE
SNPESLVVEGLPEGVPFRSPTWFGIPRLERIIRGSSKIKFVIKKPELIMSHLPLRLASKL
KKKGISPESPRRSRSSSENSSVPEIEVTIEDSPQKEQSNSDASDSNPNSKQQGKEFSFDL
WNARITDLKQKVENLFNEKCGEALGHGGPVKVPYALFDSYPEDFYVEGLPEGVPFRQPTT
FGIPRLEKILRSKPKIKFIIKKPEMLEAVIKESSDKSPQGKNNSPSKANVARTTKNSVKT
ATSVGDLNIVKVTIKDDESEPLPKAESARQLREQVNELFSQKFGEATGMNFPVKVPYRKI
TNNPGCVLVDGMPPGVAFKAPSYLELNSMRKILESAEFIKFTVIRPFPGLVINNQLLEEA
EAEAESPAAAAATTTAALPEPDEPSQIEVSIEDNTETEEKFQIKKDPDLTS
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcttcttgcaccagcaacatccatccatgatgaggaagccttggaaagcaga
atgttggttacattcctcatgtcaggacttgagtcaatgtgtaaagaactttccaagtcc
aaggcagaaattgcctgtattggtgtatatgcaagaaatgtttttgttattggaactgag
agaggaaaagcctttgtcaactctagggaagattttaagacggattttatcgaatactgt
gttacagaagaggacaggcctccaaagctgcagaaaacaaagactacaccacctgtaaac
agacagacagtggatgctgaggagctggaggctcttagaaagtctgtggaggagtttttc
tgctctttatatggtaaagctttaggaaagccagcggcagtacctgtgacattcgaagag
attcagaggaaccagtctgttgtgatagtgcagggcctgcctgaaggagtcacatttaaa
catccatcaaattatgatgtttccactctgaaatggattttggaaaataaatcagggatc
acatttagtatcaacaggccttttttggaactaaggaaacatgtaggagctgatatgaca
gatccttcacattcagttacacgcccacgtgaaagttgtcctcctgttaatgtgaaaacg
gaaccaagcaaggattctgagaccaacaaggatcatggaattccttctaaaatgtcagaa
gtaacaatgaagcaggaaagagatgatcctaactactatcaatttaatactccagcaggc
ccatccaaaacatcagagatagatgaaaaaattgctcctggaaaaagttacacagagtct
gcccaacctgactcatcagaaacaagtgacaattctgaggatgatgttgatgatggtgat
tataataatgatggtgacgagtacctgccctctgaagggagccggcggagcccaggtttg
actactgaagcagccagtactgggggaagaaatgcacaagagttcaattttaaatcctcc
caccatgacatgttagaaacaagcgagaaacctgaggttgaggtcacccttgaagaagat
gatgatgactacctaccacctgacaagagactgaagagcaccaagtcggctactgaagtg
gccaatactggtagaagaaatgcagaagagttcaattctgattcctcccagcatgactca
tcagaagcaagtgaagattctgaggctgaaatcactagtcaagatgatgatgatgatgat
gagtacctgccctctagcaagagaaagagaaggagaacaaggaatacccggtcaactaag
gaagttgccaataacaggagaagaaaagcaaaatatgtcaagtctgattcctcccggcat
gacatgtcagaaataagtgagaatcctgaggttgaggtcactgttgaagctgatgaggat
tactacatgccctctgacaagagacagaggaccaccgattcggcaaatgacaatgctagt
gctgagagaagaaatgcagaagagttcaattgcgatacctcccggcatgacatgttagaa
ataagtgagaatcctgaggttgaggtcactgtcgaagtttcaaaattcaaggcggttcct
gttctgcatgcaagttccatggacaaaaaaacagggggttttttattgtttcttaaagat
gatgatgataactacctaccacctgacaagcgactgaagagcaacaatttggcaaatgaa
tctgcagatattgagagtagaaaagaagaggaattcatctctgatacctcccggcatgac
atgtcagaaacaaatgagaatcctgaggttgaggtcacccttgaagatactgaccagcca
tatgcataccgtaacaagagacggaggagcacccagttggttaatgaagagtccaatagt
cagagtagaaaagcagaagagttcaattctgattcttctcagcatgactcctcagaagca
agtgaggtttctgaggctgagctctctagtgaagataatgatgatgactatttaccccat
gagaggagacagaggagccccaagtcagctaacagctcaggcgatagtgggagaagcaaa
ggaacacagttcaattttgaccgatggaattcgcgaattacagacttgagaaccgaagtt
gaagagctgtttgaaaagaaatatgctgaagctataaaagcaaagggcccagtgtctatt
ccatacacaaacttcctttcacacccagaagatttatatgtggaagggctgccagatggg
attcccttccggcgcccagccacgtacggcattccccggctggagaggatactgctggca
aaggaccggatccagtttgtcattaaaaagcctgaacttctgaattcgacagaggctcca
gaggccaatacagtttcaacagtctcatatacagtgaaagaggactggcattccagagtc
accaaactgagaatgacagtagatcaacttttctgtaaattgtatggcaaggctttgggc
agcaatgagcccaaagctgttccatacaagaaatttgaagctcatccgaccgacctctat
gttgaagggctgccagacaacatctcatttaagagtccctcccggtatggaatcccttgc
cttgaacaaataattcaaatgggcgacagaataaaatttgtgatcagaaggccagagctg
ctaaatcattcttcaaatgaagttattcagcccaggtcaaaccctacagcgagagaagat
tggaattccaagatcacaaagctaagaaagcaagtagaagatatatttagtaagaagttt
gccaaagctctggggctttcagtttcagagtcagtgaaagttccctattctgtgtttgaa
tcaaaccctgagtccttggtcgttgaaggcttgccagaaggagtccccttcaggagtccc
acatggtttggaattccacgccttgaaagaatcatccgtgggagtagcaaaatcaaattt
gttattaagaagcctgagcttatcatgtcccatttgcctctaagactggctagtaaacta
aagaagaaaggaattagtccagagagtcccagaaggtcacgaagttcttcagaaaattca
agtgtcccagagattgaagttactattgaagacagtcctcagaaagaacaaagtaattct
gatgccagtgactccaatccaaattctaagcaacaaggaaaagagttttcttttgacttg
tggaatgccagaatcacggacttaaagcagaaagttgaaaatcttttcaatgaaaagtgt
ggggaggcactgggacacggagggccagtgaaggtgccatatgcactgtttgattcctac
ccagaggatttctacgtggaagggcttcctgagggggtgcccttccgccagcctacaact
tttgggattccaagactagagaagatcctgagaagtaaacccaaaataaaatttattatt
aaaaagcctgagatgcttgaggcagttatcaaagaaagttctgataaaagcccccaagga
aaaaataattcccccagtaaagccaatgtagcaaggaccacaaaaaactcagtgaaaaca
gctacaagtgttggagacctaaacattgttaaagtaaccataaaagatgatgaaagtgag
ccactgccaaaagcagaaagtgccagacaattgagagagcaagtaaatgagctttttagc
cagaaatttggtgaagccactggtatgaattttcctgtgaaagttccatacagaaaaatc
actaacaaccctggctgtgtgttggtggatggaatgcctccaggtgtggcatttaaagca
cccagttatctggaactcaactcaatgaggaagattttggaatcagcagagtttatcaag
tttactgtcattagaccatttccaggacttgtgattaacaatcagctgctagaagaagct
gaagcagaagcagaatcaccagcagcagcagcagccactaccacagcagcactaccagag
ccagatgaaccaagccaaatagaagtatctatagaagataatacagaaacagaagaaaag
tttcaaataaagaaagatccagacctgacgtcatag
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