Lonchura striata (white-rumped munia): 110476698
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Entry
110476698 CDS
T05897
Symbol
MINDY4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4 isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110476698 (MINDY4)
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110476698 (MINDY4)
Ubiquitin system [BR:
lsr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
110476698 (MINDY4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Dimer_MINDY4_N
Microp_apicomplexa_10
Motif
Other DBs
NCBI-GeneID:
110476698
NCBI-ProteinID:
XP_021397534
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All DBs
Position
2:197657..276859
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AA seq
755 aa
AA seq
DB search
MDNAFVQEVAASLVREFLSRKGLKKTISTMDRELPRSALSINNRNELRNVLHLHSLYKQN
KAKENPLKTLLEIITNYFLEHRGTSRSSGSSSVLAAPQSKSSASHPPDLLDEDHGNASAL
DESRTQASRYDAENPLDKIPPPRKHQHRSEKCHTGTIHSSNLPCAWDKKLQDSREDLKAA
VISEELKSTGKEKSRPRAGLIARGMMAGPVASPPEDPQKRRLSKRSTSISSTAQPRGEEH
EEHELSVPSPDLQEIKASPTKSHVEFASKAVLSSHTNSPSEKPRNSPRDPEDFFSKLLAE
RERAKAEERKSLPSSGADSSEKSLKVSAPHRHSGAGREKKERSLRKTESRLSGHRKSPTS
TGCKEDQMKEVLDLVDVEDEETTGEVNKTPDLSTLYMLQIVSKAIDISLAKELKNLLFGS
SLCCFSEEWKIQSFTFNNIPQLKYGIVQKKGGPCGVLAAVQACVLQQLIFADSNRNKDTR
CLQPSEAHRTKCLSLALADILWRAGGHEKALVALPSGRQQFTPTGKYKADGILETLILHS
ATRYEDLILFLQQNIHQFEIGPYGCILLTVSVILSRSINLVRNDFDVLTNRLIGSHGYCT
QELVNLLLTGKAVSNVFNNVIELDSGNGNITILKGITSRSDIGLLSLFEHYDVCQVGCYL
KTPKYPIWLVCSESHFSVLFCLEKDLLSDWKTGRRFDLYYYDGLANQDEEIRLTVDTTQV
CPENKENDLTPPLEHCIRTKWQGAVIDWNGTEPIL
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgccttcgtgcaagaagtggccgcatcactggtgagagagtttctcagtaga
aaggggctgaagaaaaccatcagcaccatggaccgggagcttccccgctctgcactcagc
atcaacaacaggaacgagctcaggaatgtcctgcacctgcactccctgtacaaacagaac
aaggcaaaagagaacccactgaaaacactgctggaaattattactaattacttcctggag
caccgtgggacttccaggagctctggttccagctcagttttggcagctcctcagagtaag
agctcagcatcccacccacccgacctcctggatgaggatcatgggaatgccagtgctctg
gatgagagcagaactcaggcctccaggtatgatgctgagaatccactggataaaatccct
ccacccagaaaacatcagcacagaagtgaaaaatgccacacagggacaattcacagcagt
aacttaccctgtgcttgggacaagaagttacaagacagtcgagaggatttaaaagcagct
gtgatttctgaggagctgaaatccacagggaaggagaagtccaggcccagggctggtctc
attgccagaggaatgatggctggaccagtggcaagtccaccagaggatccccagaaaagg
aggctttccaaaagatccacgagcatcagcagcacagcccagcccaggggtgaggagcac
gaagagcatgagctgagtgtcccaagccctgatctgcaggaaatcaaagcatctccaaca
aaatcccacgtggaatttgcatcaaaggctgtgctgagctcccacaccaattctccctct
gaaaaaccaaggaacagccccagagatccagaggactttttttccaagctgctggctgag
agagagagagccaaggcagaagaaaggaagtctcttccaagctctggtgcagacagcagt
gaaaaaagccttaaagtgagtgcccctcacagacattcaggggctgggagagaaaagaag
gaaagatccctcaggaaaactgagagtcggttgtcaggccacaggaagtccccaacatct
actggctgtaaagaagaccagatgaaagaagtcctagatttggtcgatgttgaggatgaa
gagacaactggagaagttaataagaccccagatctttcaacactctatatgcttcaaata
gtatcaaaagcaattgatatttctcttgcaaaagaattaaaaaatcttctgtttggctct
agtctttgttgcttcagtgaggaatggaaaatccagagttttacatttaacaatatccca
cagctaaagtatggcattgtgcagaaaaagggtggcccatgtggggttctggctgctgtc
caagcctgtgtcctgcagcagctgatctttgcagacagcaacaggaacaaagacacccgt
tgtctccagccctcagaagctcacaggaccaagtgcctctccctggctctcgctgacatt
ctgtggcgtgcagggggccacgagaaagccctggtggcactgccatcaggaagacagcag
ttcactcccacaggaaaatacaaggcagatggaatcctagaaactctgatacttcacagt
gccacaagatatgaggacctgattctatttctacagcagaatattcatcagtttgaaatt
ggtccctatggctgcatcctcctgactgtgtctgtcatcttgtcgagatccatcaacctg
gtgcgcaatgacttcgatgtgctcacaaaccgcctgattggcagccatggctactgcacc
caggaattggtgaacttgcttttgactggcaaagctgtttccaatgttttcaacaatgtg
atcgagctggactctgggaatggcaatatcaccattttgaaaggcatcacgagtcgcagt
gatattggtttgctgtccctgtttgagcactatgatgtctgtcaggtcggttgttacttg
aagacccccaagtacccaatttggctggtctgcagtgaaagccacttcagtgtgcttttc
tgtttggaaaaggatttgctcagcgactggaaaacgggacggaggtttgatctctattac
tacgatggcttggccaaccaggatgaagagatacggttgacagtggatacaactcaggtg
tgccctgaaaataaagaaaatgatcttactcctccacttgagcactgtattaggacaaag
tggcaaggagctgtcatcgactggaacggcacagaacccatcttgtga
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