Lonchura striata (white-rumped munia): 110476714
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Entry
110476714 CDS
T05897
Symbol
PDX1
Name
(RefSeq) pancreas/duodenum homeobox protein 1
KO
K07594
insulin promoter factor 1
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110476714 (PDX1)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
110476714 (PDX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
110476714
NCBI-ProteinID:
XP_021397551
LinkDB
All DBs
Position
1:48759539..48763068
Genome browser
AA seq
260 aa
AA seq
DB search
MNTEEQYYASAQLYKESCAFQRAQAQDYNPSPPACLYMGRQQQTPYSSALGALEQGSPPD
ISPYEVPPITEDAGVSHLHHHHHHPHLPPPHQDALPFPDGADTGAIEEPRVQVPFAWMKS
TKSHAWKGQWTGGSYMVEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLN
LTERHIKIWFQNRRMKWKKEEDKKRGAGNSNDPEQDCVVSSGELQTKEDLQPCPAGNLPS
GASRDLLAPSLVPRRQQDSR
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgaggagcagtattacgcctcggcgcagctctacaaggagtcgtgtgcgttt
cagagagcccaagcgcaggactacaaccccagcccccccgcctgcctgtacatgggcagg
cagcagcagactccttattccagcgccttaggggctctcgagcaaggcagccctccagac
atttcaccttacgaggtgccccccatcactgaggatgccggggtctcccaccttcatcac
catcaccatcaccctcatcttcctcctccccaccaggacgcgctgcctttcccagacggg
gcggatacgggggctatagaggagccccgagtgcaggtgcctttcgcctggatgaagtcc
accaaatcgcacgcctggaagggacagtggaccggtggatcctacatggtggaaccggag
gagaacaagcgtacgaggacggcgtacacgcgggcgcagctgctggaactggagaaggag
tttctcttcaacaagtacatctccaggccacggcgggtggagctggctgtcatgttgaac
ttgaccgagaggcacatcaagatctggttccagaacaggcggatgaagtggaagaaagaa
gaagacaaaaagcgaggggcgggcaacagcaatgaccccgagcaagactgcgttgtgtcc
tccggggagctgcagaccaaggaggatctccagccgtgccccgccgggaatcttccctcg
ggagcctccagggaccttctcgcccccagcctggtccccagaaggcagcaggactctcgg
tga
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