Lonchura striata (white-rumped munia): 110476721
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Entry
110476721 CDS
T05897
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsr04040
]
110476721 (TRPC4)
Ion channels [BR:
lsr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110476721 (TRPC4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
110476721
NCBI-ProteinID:
XP_021397557
UniProt:
A0A218V724
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Position
1:complement(52711648..52840969)
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AA seq
975 aa
AA seq
DB search
MAQFYYKRSVNAPYRDRIPLRIVRAESELSHSEKAYLNAVEKGDYASVKKALEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPVLLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMLTCVVIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLSMQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFTKYSGLVPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETNEPGNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKARHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWLWRHLCKKKIRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLKGSKLSNLQTGKMSKDTASLSENEEN
SESEGNKKGKKKPFSLFDITTMIHPRSANIASEGHNVSNGSAMMVSESTQEKQKRVNFVT
DIKNFGLFHRRSKTNSVEQSTNKIYTVSEEVSRQQAEEQCEKTDELEERELIMNCELNFQ
NPGKKCVLAESQNTSESLDSQEEGSICPSEIEKTELQNSEPATLQDQLDKALDISIDSDG
KQETIVQGDYVITRL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttctactacaaaagaagtgtcaatgctccctacagagatcgtatccctctt
cgcattgtacgggcagaatccgaactgtctcattcagagaaggcctatctgaatgccgtg
gagaaaggagattatgccagtgtaaagaaagctttggaggaggcagaaatttatttcaag
atcaatattaactgcattgatcccctgggaagaactgcactccttattgcaattgaaaat
gagaaccttgagctcattgagctgctccttagttttaacgtgtatgtgggagatgctctg
ttgcatgccatacggaaggaggtggttggggccgtggagctgctgttaaatcacaagaag
cccagtggagagaagcaggtgccaccagtgcttctggacaagcagttttcagaatttacg
ccggatatcacacctattattctggctgcccacaccaacaactatgaaatcataaagctc
cttgtgcagaaaggggtgtctgtgcccaggccacacgaggtgcgctgtaactgtgtcgaa
tgtgtctcaagctcagatgtggacagcctccgccactctcggtccagactcaatatctac
aaggctctggcaagcccatcactgattgctttgagcagtgaggatcccttccttaccgct
tttcaactgagctgggagctgcaggaactgagtaaagtcgaaaacgagtttaagtcagag
tatgaggaactgtcacggcaatgcaagcaatttgcaaaagatctcctggatcagacacgg
agttccagggaattggaaattattcttaattacagagatgataatagcttgatagaagaa
caaagtggtaatgatcttgcaagactgaaactggcaattaagtaccgtcaaaaagagttt
gttgctcagcccaactgccagcagctgctcgcatcccgctggtatgacgagttccccgga
tggcggaggcgacactgggcagtgaagatgttgacatgtgttgtgataggactccttttc
ccagtcttctctgtctgctacctgatagctcccaaaagcccattggggctgttcatccga
aagccatttatcaaatttatctgccatactgcatcatacttgacttttctgttcctgctg
ttgcttgcctctcagcacatcgacaggtcagacctcagcatgcagggaccccctccaacc
atcgtcgagtggatgatattaccgtgggtcctgggttttatctggggtgaaattaaacag
atgtgggatggtggactacaggactacattcacgattggtggaacctcatggattttgta
atgaactccctgtacttggcaacaatctccttgaaaatcgttgcatttacaaagtatagt
gggttagttccacgggagagctgggacatgtggcatccaaccctggtggctgaagccctg
tttgcaatcgcaaacatctttagctccctgcgcttgatctcattattcactgcaaattct
cacctgggacctctgcagatatctctaggaagaatgctgctggacattttgaagtttctc
ttcatatactgtcttgtgctgcttgcttttgcaaatggattgaaccagctgtacttctac
tatgagacaaatgaacctggcaactgcaaaggaatacgatgtgaaaagcagaataatgca
ttttcaacgttatttgaaacgctgcagtcattattctggtctatatttggactcatcaat
ctctatgtgaccaatgtgaaagcaaggcatgaattcactgaatttgttggggccaccatg
tttggtacctataatgtaatatctctggttgttctactcaacatgctaatagccatgatg
aataactcttaccaactcattgctgatcatgcagacattgagtggaagtttgctcgaaca
aaactctggatgagttactttgaagaaggaggaactctgcccactccttttaatgtcata
ccaagcccaaagtctttgtggtatctgatcaaatggttatggagacacctttgcaagaaa
aaaattagaagaaagcctgaaagttttggaacaatagggagacgtgcagctgacaatttg
aggagacatcatcaataccaggaagttatgagaaatctggttaaaaggtatgttgcagcg
atgataagagatgccaaaactgaggaaggattgacagaagaaaattttaaggagttaaaa
caagatatttccagctttcgctttgaagttctgggtttgctaaaaggaagcaagctgtct
aatttgcagactggaaagatgagcaaagacactgcctctctgtcagaaaatgaagaaaat
agtgagagtgaaggaaacaagaaaggaaagaaaaagcccttcagcctttttgacataaca
acgatgattcacccacgatcagccaatatcgcctctgaaggacataatgtaagcaatggc
tcagcaatgatggtgtcagagtctactcaggagaaacaaaagcgtgtgaattttgtaaca
gacataaaaaattttgggttgtttcacagacgatcaaaaacaaactctgtggagcagagt
acaaataaaatatacacagtttctgaagaagtttctcgtcaacaggcagaagaacaatgt
gagaaaactgatgaactggaagagagagaattgatcatgaactgtgaattaaacttccaa
aatcctggcaaaaaatgtgtgttagctgagtcacaaaataccagtgagtctttggattca
caggaagagggaagtatttgtccttcagaaatagagaaaacggagttgcaaaactcagaa
cctgccactctgcaggatcagctggacaaggcattggacattagcattgactctgatggg
aaacaggaaacaattgttcagggtgactatgtgataacgaggttgtga
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