Lonchura striata (white-rumped munia): 110476761
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Entry
110476761 CDS
T05897
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110476761 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110476761 (PAN3)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110476761 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
110476761 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Pkinase
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
110476761
NCBI-ProteinID:
XP_021397660
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All DBs
Position
1:48844677..48924696
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AA seq
907 aa
AA seq
DB search
MNSSGLPCSSPSPVVGPPPGAGVGVAGPAAGGAGAGGGGGAVKLKFCRYYAKDKTCFYGE
ECQFLHEEPGAAPAGPGPAAPPLGGLPLGIPPPAAAAGPGYSAHGAGSGPAAAVVGPKKA
ELGAGGGGGGGGGGGLDGPRLAIPGMDGGGLADANLTDSYFSTSFIGVNGFGSPAETKYP
MMQRMTNSSSSPSLLNDSAKQYAGHDPLTSPNSSLFNDFAALSVSQRRKLAKPAFPSFIT
DLEDRYNTVLPRKYRLGMLDERIVPVGSKARKSKNPIGCLPDRCKTGVPINMVWWNRVTE
NNLQTPNPSANEFIPKGGSTSRLSNVSQSSMSAFSQALFSHPSMGSPATAGLAPGMSLSA
GSSPLHSPKITPHTSPAPRRRSHTPNPANYMVPTSASASVASAVSQPPSTGQVIQKETVG
GTTYFYTDTTPAPLTGMVFPNYHIYHPAAPHVAYMQPKANAPSFFMADELRQELINRHLI
TMAQIDQADIPAVPAEVDSYHSLFPLEPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYC
LRRIHGFRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMM
SRHFNDPSADSYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACR
VMDPTKILVTGKTRLRVNCVGIFDVLTFDNSQNNPLALMAQFQQADLISLGKVVLALACN
SLSGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAA
QMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFH
QVTEAGTPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELI
AAANGQL
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcagcggcctgccctgctcgtcgccgtcgccggtggtggggccgccgccgggg
gcgggggtcggcgtggcggggccggcggccggcggggcgggggccggcggcggcggcggg
gccgtgaagctgaagttctgccgctactacgccaaggacaagacctgcttctacggcgag
gagtgccagttcctgcatgaggagccgggcgccgcccccgccggcccggggcccgccgca
ccccccctcggcgggctcccgctcggcatccccccacccgccgccgccgccgggccgggc
tactcggctcacggggccggctcgggcccggcggcggcggtggtggggcctaagaaagcc
gagctgggggcgggaggcggcggaggcggcggcggcggcggggggctggatggcccgcgg
ctggcgattcctggaatggatggtggtgggttagctgatgctaatctaacggattcatac
tttagcaccagcttcattggcgttaatggatttggaagtcctgctgaaacgaagtatccc
atgatgcagaggatgacaaatagcagcagctcccctagccttctcaatgacagtgccaag
cagtatgcaggccatgatccactaacttcaccaaattcatccttgtttaatgactttgct
gccctcagcgtgtctcaaaggaggaagctggcaaaaccagcatttccttcgtttatcact
gacttggaggacagatataatacagtcctgcccaggaagtatcgactgggaatgctggat
gagaggatagttccggtgggatcaaaagcaagaaaatcaaagaaccctattggctgtctg
cctgacaggtgtaaaacaggagtacccatcaatatggtttggtggaacagagtcacagaa
aacaatttacagacaccaaatccttctgcaaatgagtttattcctaaaggaggatcaact
tccaggctgagtaatgtatcccagtcaagtatgtctgccttctctcaagccttgttctct
cacccctccatgggaagtcctgctactgctgggttagcaccaggaatgtcactgtcagca
ggatcttctcctcttcattctcccaaaataactcctcatacatctcctgctcctcgaaga
agaagtcatactcctaacccagcaaactatatggtgcctactagtgcctctgcatctgtc
gctagcgctgtctctcagcctccatctactggccaggtgatccagaaggaaacagtgggt
ggaacaacatacttctacactgatacaactccagcacctctcacaggaatggtttttcca
aactaccacatctatcatccagctgcacctcatgttgcttacatgcagccaaaagcaaat
gcaccttccttcttcatggcagatgagctcagacaggaactcatcaacagacacttaata
acaatggcccagattgatcaggctgatattcctgcagttcctgcggaagtggacagctac
cacagtctctttcctttggaaccactgccaccacccaatcggatacagaaaacgagcaac
tttgggtacatcacatcgtgctataaagctgtaaatagtaaagatgacctgccgtattgc
cttcggaggatacatggttttcgtcttgttaacacaaagtgcatggtattggttgacatg
tggaaaaagattcagcactcaaatatcgtaactctgcgtgaagtgtttaccactaaagct
tttggagaacattctttagtgtttgcatatgattttcatgctggaggggagactatgatg
agcagacacttcaatgaccctagtgctgattcctatttcacaaaacggaaatggggtcag
catgatgggcctctgccacggcagcatgcagggttgcttccagagtctttgatatgggcc
tatattgtgcagctcagctctgccttacggaccattcacacagcaggactggcatgcaga
gttatggatccaacgaagattctggtaacaggcaaaacaaggttacgagttaattgtgtt
ggaatctttgacgttttgacatttgacaacagtcaaaataatccactggcattaatggct
cagtttcagcaagcagatctgatctccctggggaaagttgtgttggctttggcttgcaat
tctttgtcaggaattcagagagagaatttgcagaaagcaatggaactggtgacaatcaac
tattcctctgatctgaagaatctgattttgtatttgctgactgaccaaaacagacttcgc
agtgtaaacgatatcatgcctatgattggtgcacgattctatactcagttggatgctgct
cagatgcgaaatgatgttatagaagaagacctagcaaaggaggtgcaaaatggaaggttg
tttaggctcctagcaaaattgggaacaatcaatgagaggccagagtttcagaaggaccca
acgtggtcagaaactggagacaggtatttactaaagctctttcgagaccaccttttccat
caggtgacagaagcgggtactccttggattgacctcagtcacattatctcatgtcttaac
aagttagatgctggtgtgccagaaaaaataagcctcatttccagagatgagaagagtgta
cttgtggtaacttacagcgatttaaaacgctgctttgaaaatacttttcaagaactgatt
gcagccgcaaatggtcagttgtag
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