Lonchura striata domestica (Bengalese finch): 110476854
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Entry
110476854 CDS
T05897
Symbol
DENND4B
Name
(RefSeq) DENN domain-containing protein 4B
KO
K20163
DENN domain-containing protein 4
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110476854 (DENND4B)
Membrane trafficking [BR:
lsr04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
110476854 (DENND4B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_long
PPR_3
DUF2464
PPR
Motif
Other DBs
NCBI-GeneID:
110476854
NCBI-ProteinID:
XP_031362731
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All DBs
Position
25:439813..463176
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AA seq
901 aa
AA seq
DB search
MSDEKPPQLVDYFVVAGLAEASRALEEEQQPRPARPGEPITDVAVIIRSQGEEVPQGFTC
IETSTSGHPVDLNAGLLNNPQMFLCYKRGRDKPPLIELGVHYEGKDRPKPGYQILDTTPY
SRSANLASGSPGHQRTFLTFRRAAEPPGHHTLGVTDICLVMPSKGESTPHTFCRVDKNLN
TSMWGPALFLCYKIAVAKDNTLVYEAGLLSRYPEQDSESFPLPESVPVFCLPMGATIESW
PVGTKYPLPVFSTFVLTGASGDKVYGAAIQFHEAFPRERLSEAQALRLGLLSVVDRRPVP
GRSLHTRKSICVLSHWPFFEVFRKFLMFIYRYSISGPHVLPLETHISHFMHNVPFPSPQR
PRILVQMSPYDSLLLCRPVSSPLPLSGASFLTLLQNLGPDNAVALLVAVLTEQKLLIHSL
RPDVLTSVGEALVACALRGYRSFLRPIAPAPAPAGRDAGSLFALQGFLRSRERAYQRFYG
QLLRTQLFTQFIEDCSFASDREPCLEFFDTCVDKEMKVAQRVAQKSSAVPELWARCLLGH
CYGLWFLYLPAHVRAAPAKLRALQLAYDVLRKMEQHKVVLPDEVCYRILMQLCGQYGEPV
LSVRVLLEMKRAGIVPNTVTYGYYNKAVLESKWPAGTQGGRLRWAKLRNVVLGAAQFRQP
LRQRQRRGDPRGDRAPRPPLQRQTSWAGRSLRDAAPRLLKSGSLSFPGGARDGRDGPLLL
PATPGPPRSADGSLSDIATDDSGGDEGPAGAPGGGPGGRPGGGPGVATPRRGLAAKLQQL
LSPGKRPAERPRELGARRGSEPPDPERPSRCSPAESLRQPRERPESTASESSVSLGSELD
LSDASGGSSGAPKSAEPSVDGAAGTEPPALEVLLSSCSRCPGCAALVFDEELMGGEKNPQ
Y
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgagaagccgccgcagctcgtggattacttcgtggtggccgggctggcggag
gcgtcgcgggcgctggaggaggagcagcagccgcggccggcgcggcccggggagcccatc
acggacgtggccgtgatcatccgctcgcagggcgaggaggtgccccagggcttcacctgc
atcgagaccagcacgtcgggccaccccgtggacctcaacgcggggctgctcaacaacccg
cagatgttcctgtgctacaagcgcgggagggacaaaccccccctgatcgagctgggggtg
cactatgagggcaaggaccgcccgaagccgggctaccagatcctggacacgaccccctac
agccgctcggccaacctggcctcggggtcgccgggccaccagcgcacgttcctgacgttc
cggcgcgcggccgagccccccggccaccacacgctgggggtcaccgacatctgcctggtg
atgcccagcaagggcgagagcacgccccacaccttctgccgcgtggacaagaacctcaac
accagcatgtggggccccgcgttgttcctgtgctacaagatcgccgtggccaaggacaac
acgctggtctacgaggcagggctgctgagccgctaccccgagcaggacagcgagtccttc
ccgctgcccgagtcggtgcccgtgttctgcctgcccatgggggccaccatcgagagctgg
cccgtgggcaccaagtaccccctgcccgtcttctccaccttcgtcctcaccggcgcctcg
ggggacaaggtgtacggcgccgctatccagttccacgaggcgttcccgcgggagcggctg
tcggaggcgcaggcgctgcgcctggggctgctcagcgtggtggaccggcggccggtgccc
gggcgctccctgcacacccgcaagagcatctgcgtcctgtcccactggcccttcttcgag
gtcttccgcaagttcctcatgttcatctaccgctactccatctcgggcccccacgtgctg
cccctggagacgcacatctcccacttcatgcacaacgtgcccttcccgtccccgcagcgc
ccgcggatcctggtccagatgtccccgtacgacagcctgctgctgtgccggcccgtgtcc
tcgccgctgcccctcagcggggccagtttcctgacgctgctgcagaacctgggccccgac
aacgccgtggcgctgctggtggccgtcctcaccgagcagaagctgctcatccactcgctg
cgccccgatgtgctgaccagcgtgggcgaagccctggtggcgtgcgccctgcgcggctac
cgctccttcctgcgccccatcgcgcccgcgcccgccccggccggccgcgacgccggcagc
ctcttcgccctgcaggggttcctgcgctcccgggagcgggcgtaccagcgcttctacggg
cagctgctgcgcacgcagctcttcacgcagttcatcgaggactgctccttcgccagcgac
cgcgagccctgcctcgagttcttcgacacctgcgtcgacaaggagatgaaggtggcccag
cgggtggcccagaagtcgtcggcggtgccggagctgtgggcgcgctgcctgctggggcac
tgctacggcctctggttcctgtacctgcccgcccacgtgcgcgccgcccccgccaagctc
cgcgcgctccagctggcctacgacgtcctgcgcaagatggagcagcacaaggtggtgctg
cccgacgaggtgtgctaccgcatcctgatgcagctgtgcgggcagtacggcgagcccgtg
ctgtccgtgcgcgtgctgctggagatgaagcgcgccggcatcgtccccaacaccgtcacc
tacggctactacaacaaggcggtgctggagagcaagtggccggcggggacgcagggcggg
cggctgcgctgggccaagctgcggaacgtggtgctgggggcggcgcagttccggcagccg
ctgcggcagcggcagcgccgcggagacccccggggtgaccgggccccgcggccgccgctg
cagcgccagaccagctgggcgggccggagcctgcgggacgcggcgccgcggctgctcaag
agcggcagcctcagtttccccggcggcgcccgggatggacgggacggcccgctgctgctc
cccgccacccccggcccgccgcgctccgccgacgggagcctctcggacatcgccaccgac
gacagcggcggtgacgagggcccggccggggctcccgggggcggtcccggtggccgtccc
ggtggcggtcccggtgtggccacccctcgccgggggctggcggccaagctgcagcagctg
ctgtcccccggcaagcggcccgcggagcggccccgggagctcggggctcgccggggctcg
gagccgccggacccggagcgcccgtcccgctgcagccccgccgagagcctgcggcagccc
cgggagcgccccgagtccacggcgtccgagagctccgtgtccctgggcagcgagctggac
ctgtccgacgcctcggggggcagcagcggggcccccaaatccgccgagccctccgtggat
ggggcggcggggacagagccccccgccctggaggtgctgctgtccagctgctcgcgctgc
cccggctgcgccgcgctcgtcttcgacgaggagctgatgggtggggagaagaaccctcag
tattaa
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