Lonchura striata (white-rumped munia): 110476872
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Entry
110476872 CDS
T05897
Symbol
ARHGEF6
Name
(RefSeq) rho guanine nucleotide exchange factor 6 isoform X1
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04518
Integrin signaling
lsr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
110476872 (ARHGEF6)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
110476872 (ARHGEF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110476872 (ARHGEF6)
Membrane trafficking [BR:
lsr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
110476872 (ARHGEF6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
CH
SH3_9
SH3_1
PH
RhoGEF67_u1
SOS1_NGEF_PH
YRF11-like_helical
CAMSAP_CH
bHLH_IRO3
Nmad5
RPW8
CENP-Q
Motif
Other DBs
NCBI-GeneID:
110476872
NCBI-ProteinID:
XP_021397829
UniProt:
A0A218UE16
LinkDB
All DBs
Position
4A:complement(84125..122922)
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AA seq
773 aa
AA seq
DB search
MNPEEQIVTWLISLGVLNSPKKIVDDPEGFLKTSLKDGTVLCKLVNRLLPGSAEKYCLEP
KNEADCISNIQEFLKGCTLLKVEVFDPHDLYTGDQFSKVLSTLTAVNKATEDQLSKEPCL
HLSSLNSTAGDPQSDSNGTASQSARVLRRQSKPVEMTENGSYQLVVKARFNFKQTNEDEL
SVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSTDKPLSPKALKGLENTQLTK
NYYPVVLQNILETERDYAKELQSLLGTYLRPLQSYDKLSTGDIAALLGNMEEISAFQQTL
NQALEEVAKLPENQQHVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQ
GAASPGILILTTSLSKPFLRLDKYVTMLQELERHMEEAHTDHEDVLKTITSFKSLVSQCQ
ELRKRKQLELQILSESIQRWEGEDIKMMGNVIYMSQVMVQSGGSEEKEERYFLLFSNVLL
MLSASPRMSGFIYQGKLPLTGMVLTKLDDAEGNEHVFEITGNTMERITVSCSTSQDLHEW
LDHLQRLTKGTCSTVSKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPS
AALSYKERMSYILKDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVI
EAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQTVTEEKSLVDTVYALKD
EVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaagaacagattgtaacgtggcttatttcactaggagtcttaaattcccct
aagaaaatagtggatgatccagaggggttcctgaaaacttctctgaaagatggaactgtg
ctttgcaaactcgttaatcggcttcttccgggatctgcagaaaagtattgcctggagcct
aaaaatgaagctgattgcatcagtaatattcaagagttcttgaaaggctgcacacttctg
aaagtggaggtgtttgatccacatgatttgtacactggagatcagttctccaaggtcctg
agcacattaacagctgtaaataaggctactgaagatcagctgtcaaaagagccatgtttg
catctgtcctctcttaactccacggctggagacccccagagtgactccaacggcacagct
tcccagtcagcaagggtgttacggaggcagtccaagcctgtggagatgaccgagaatggt
agttaccagctggtggtaaaggccaggttcaattttaagcagaccaatgaggatgaactc
tctgttaacaaaggcgacattatttatgtcactcgagttgaagaagggggctggtgggaa
ggcaccttgaatggaaaaacaggctggttcccaagtaactacgtcagagaaatcaaatct
accgataaaccactctctcccaaagcattaaaagggctagaaaacactcagctgacaaag
aattattaccctgtggtgttgcaaaatattctggaaacagaacgagattatgcaaaggaa
ctacagtcacttctgggaacttatttaagacccctccagtcatacgataagctcagcacc
ggggacatcgcagcactgctaggaaacatggaagaaatctctgcttttcagcaaacactg
aaccaggccttggaagaagttgcaaagctccctgagaaccagcagcatgtgggaggctgt
ttcatgaacctgatgccccagttccgctccctgtacctgacatactgtgctaaccaccct
tcagcagtgaatgtcctcacacagcatagtgatgagctggagaagttcatggagagccaa
ggtgcagccagcccaggcattctcatcctgaccacaagcctcagcaagcccttcctgagg
ctggataaatacgtgacaatgctgcaggagcttgagcggcacatggaggaggcgcataca
gatcatgaagatgttctgaaaaccatcacatccttcaagtcccttgtgtcacaatgccag
gaactgaggaagaggaaacaacttgagctgcaaatcctttctgaatccatccagcgctgg
gaaggagaggacataaaaatgatgggaaatgtcatctacatgtcccaggtcatggtccag
tctggtggaagtgaggagaaagaggagcggtatttcttgttattttccaatgttttgctg
atgctgtctgcaagcccacggatgagtggattcatctatcagggaaagctgcctttgaca
ggaatggtgctgacaaagctggacgatgccgaagggaatgagcacgtgttcgaaatcaca
gggaacacgatggagcggatcactgtgtcctgcagcaccagccaggacttgcacgaatgg
cttgaccacttgcaaaggctgaccaaagggacatgcagcactgtctccaaaacgcagtcc
tggagccctcattcgacatttagttcagctgggcagatccgtgggcctctggaacctccc
aaaatccttaagccctggagcttgagctgcctccgtcctgctcctccactcagaccttca
gcagcactgagttacaaagagaggatgtcttatatcttaaaggattccagcaaaagtcca
aaaacaatgaagaagtttcttccaaaaaggaaaactgagagaaaaccatctgatgaagag
ttcgttattcggaaaagtactgctgcactggaggaggatgctcagatcctgaaggtgatt
gaggcatactgtactggggcaggcttccagcaagctctcagctcaggctcccgtaaagac
tccatcccccaagtccttcttcctgaggaagagaaaatcatcatagaggagacacgaagc
aatggccagacagttacagaggaaaaaagtcttgttgacacagtttatgcactgaaagat
gaagtcaaagagctgaagcaggaaaacaaaaggatgaaacagtgtttggaggaagagctt
aaatccaggaaggacttggagaagctggtgagaaggctgctgaagcagacagatgagtgt
ggcagggaggacaccgggcgcaagtcatccctgatcgcctga
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