Lonchura striata (white-rumped munia): 110476889
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Entry
110476889 CDS
T05897
Symbol
SLAMF1
Name
(RefSeq) signaling lymphocytic activation molecule
KO
K06536
signaling lymphocytic activation molecule family member 1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
lsr04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
110476889 (SLAMF1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110476889 (SLAMF1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lsr04515
]
110476889 (SLAMF1)
04090 CD molecules [BR:
lsr04090
]
110476889 (SLAMF1)
Cell adhesion molecules [BR:
lsr04515
]
Immunoglobulin superfamily
SLAM/CD2 family
110476889 (SLAMF1)
CD molecules [BR:
lsr04090
]
Proteins
110476889 (SLAMF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
SLAM
VID27
Rv3627c_N
TMEM154
RAMP
ASFV_P17
Motif
Other DBs
NCBI-GeneID:
110476889
NCBI-ProteinID:
XP_021397855
LinkDB
All DBs
Position
25:complement(1165451..1171276)
Genome browser
AA seq
288 aa
AA seq
DB search
MGSGAWLRLLLTLGALWGIGAREKVLGILGEATLLRIPHELRERTEEFGEASWKKTMEEP
LKKKFLLKISGGNYTEFEPERMRFHKEDFSLEILNTSRDDQRLYEYSVSKGPEEEVWQIQ
LEVFEPVADPIIRILRRESSNGSCSLELRCSSERGDEVSYSWASRDNGTGGICAGSGGGL
NLSYALRSAAFGCVCTASNAVSRRHAAFHAEQCGSEHWDVPRVRTELLVPLVVLGVIIII
IIIVVIVTFRATRSAKCDPDPSQVTPDPTQVTPASATIYAQVQRVQGE
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgggctccggcgcttggctccggctcctcctcaccctcggagctctttggggaatcgga
gccagggaaaaggtgctgggaattctgggggaggcgacgctcctgcggatcccccacgag
ctccgggaacgcaccgaggaattcggggaagcctcctggaaaaaaaccatggaggagccg
ctgaagaagaaattcctgctgaagatttccggcgggaattacacggagttcgagccggag
cggatgcgtttccacaaggaggacttttccctggaaatcctcaacaccagccgggatgat
cagcggctctacgagtacagcgtcagcaaggggccggaggaggaggtctggcagatccag
ctggaagtgttcgagccggtggccgatcccatcatccggatcctccgtcgggaatcctcc
aacggcagctgctccctggagctgcgctgctcctcggagcggggggacgaggtttcctac
agctgggccagccgggacaacggcaccggggggatctgcgccggcagcggcggcggcctg
aacctgtcgtacgcgctgcggagcgcggccttcggctgcgtctgcaccgccagcaacgcc
gtcagccgccgccacgccgccttccacgccgagcagtgcggctctgagcactgggatgtc
cccagggtgaggacagagctcctggtgcctctggtggtgctcggtgtcatcatcatcatc
atcatcatcgtggtcattgtcaccttcagggccacccgctcggccaaatgtgacccagac
ccctcccaggtcaccccggaccccacccaggtcacccccgccagcgccaccatctacgcc
caggtgcagcgggtgcagggagaataa
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