Lonchura striata (white-rumped munia): 110476989
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Entry
110476989 CDS
T05897
Symbol
WASHC5
Name
(RefSeq) WASH complex subunit 5
KO
K18464
WASH complex subunit strumpellin
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110476989 (WASHC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110476989 (WASHC5)
Membrane trafficking [BR:
lsr04131
]
Protein recycling
Others
WASH complex
110476989 (WASHC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
DUF6563
DUF3106
SNaCT8
Motif
Other DBs
NCBI-GeneID:
110476989
NCBI-ProteinID:
XP_021398018
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All DBs
Position
2:complement(140556549..140581982)
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AA seq
1159 aa
AA seq
DB search
MVDFLAENNLCGQAILRIVSCGNAIIAELLRLSEFIPGVFRLKDKADQQKYGDIIFDFSY
FKGPEICEGKLEAKPELLDLDEEFRENNIEILTRFYLAFQSVHKYIVDLNRYLDDLNEGI
YIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKIEGEVRERMLVSYYRYSAARSSAD
SNLDDICKLLRSTGYSSQPGAKRPPNYPESYFSRVPISETFISMVIGRLRSDDIYNQVSA
YPLPEHRSTALATQAAMLYVILYFDPSILHTQQAKMREIVDKYFPDNWVISIYMGITVNL
AEAWEPYKAAKTALNYTLDLSNVKEQASRYAAVTERVHTQVQQFLKEGCLREELVLDNIP
KLLNCLRDCNVAIRWLMLHTADTACDPNNKRLRQIKDQILTDSRYNSRILFQLLLDTAQF
EFILKEMFKQMLSEKQAKWENYKKEGSERMTELADVFSGVKPLTRVEKNENLQAWFREIS
KQIMSLNYDDSTAAGRKTVQLIQALEEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINI
KEEVLITMQIVGDLSYAWQLIDSFTSIMQDSIRVSPSMVTKLRATFLKLASALDLPLLRI
NQANSPDLLSVSQYYSGELVSYVRKVLQIIPESMFTSLLKIIKLQTHDIIEVPTRLDKDK
LRDYAQLGPRYEVAKLTHAISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVKRVAL
ALHRGLIFNPRAKPSELMPKLKEMAATMDGFHRSFEYIQDYVNIYGLKIWQEEVSRIINY
NVEQECNNFLRTKIQDWQSIYQSTHIPIPKFTPVDESVTFIGRLCREILRITDPKITCYI
DQMNTWYDIKTHQEVTNSRLFSEIQDTLGTFGLNGLDRLLCFMIVKELQNFLSMFQKNIL
RDRSVQDTLKALMSAVSPLKGIIANSNKVYSAAIAKTQKIWTAYLDSIMKVGQMQILRRQ
ITNELNYSCRFDSKHLAAALENLNKAILADIEAHYQNPLLPYPKEDNTLLYEITAYLEAA
GIHNPLNKIYITTKRLPYFPTINFLFLISQFPKLQYNRNLGVVCKRPADQIDWLPLVLGL
LTLLKQFHSRYTEQFLALIGQFIRSTMEQCTSQKIPEMPADVVGALMFLEDYIRYTKLPR
KVVEAHVPSFIFDEFRTVL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggtggattttctggctgaaaacaatctctgtggtcaggcaattcttcggattgtttcc
tgtggaaatgccatcattgcagaacttctgaggctttccgaatttattcctggtgttttc
agactaaaggacaaggctgatcagcagaagtatggagatatcatatttgatttcagttat
ttcaaggggcctgagatatgtgaaggtaaactggaagccaagcctgagttactggattta
gatgaagaatttcgtgaaaacaacattgaaattttgacaagattttatttagcttttcag
agtgtacataaatacattgtagatttaaacagatacttagatgacctcaatgaaggaatt
tacattcagcaaacattagaaaccgtcctccttaatgaagatggaaaacagcttctatgt
gaagccctgtacttatatggagtcatgctcttggtcattgaccagaagattgaaggagaa
gtcagggaaagaatgttggtttcctactaccgatacagtgcagcccgatcctctgctgac
tccaatttagatgatatttgcaaattgcttcgaagcactggatactcgagccaacctgga
gctaaaagacctccaaactaccccgagagttacttcagcagggttcctataagtgaaaca
ttcattagcatggttattggccgcctacgctcagatgacatttacaaccaggtttcagca
tatccattaccagaacaccgcagcactgccctggctactcaggctgctatgctctatgtg
atactgtattttgacccttctattcttcacactcaacaagcaaaaatgagagagattgtg
gataagtactttccagataattgggtcattagcatttacatgggaatcactgtcaatctg
gcagaagcatgggaaccctacaaagctgctaaaactgccctcaactacactctggatctt
tcaaatgtcaaagaacaggccagcagatatgctgcagtcactgagcgagtgcacacgcag
gtgcagcagttcctcaaggagggctgtctgagggaagagctggtgctggacaacattccc
aagctgctgaattgcctgcgagactgcaacgtggccatccgctggctgatgctgcacacg
gcagacaccgcttgtgatccaaataacaaacgtctccgccaaataaaggatcaaatttta
acagactcaaggtacaattccaggatccttttccagctacttctggatacagctcaattt
gaattcattttaaaagagatgttcaagcagatgctgtcagaaaaacaagcgaaatgggag
aactataaaaaagagggatctgaaaggatgactgagcttgctgatgtcttctcaggagtt
aaacctcttactagagtggagaaaaatgaaaatctccaggcttggttcagagaaatctcc
aagcaaataatgtctctgaactatgatgattccactgcagcaggcagaaaaactgtgcag
ctaatacaggctttggaagaggtccaagagttccaccagctagaaagtaacctgcaagtt
tgccagtttctggctgatacccgcaaatttctccatcagatgatccgaactatcaacatt
aaagaagaggtcttgatcaccatgcagatagttggtgatctctcttatgcttggcaatta
attgacagctttacatctattatgcaagacagtataagagtcagtccatctatggtaact
aaactcagagccactttcctaaagcttgcttctgctcttgatttgccacttctccgtatc
aatcaagcgaacagccccgaccttctgagtgtgtcccagtattactctggcgagttggtt
tcctatgtgagaaaggttctacagataattccagaaagcatgtttacatctcttctcaaa
atcataaagcttcagactcacgatattattgaagtgcccactcgccttgataaggacaaa
ctacgagattatgctcagctgggaccacgatatgaggttgccaagctaacccatgcaatt
tcaatcttcacagaaggtatcctcatgatgaaaacaactttagttggtatcatcaaggtg
gacccaaaacagttactggaggatggaataaggaaggaactggtaaaacgggtggccctg
gctcttcacaggggtctcatctttaatcctagagccaagccaagcgaactcatgcccaaa
ctgaaagaaatggcagctacaatggatgggttccatcgatcatttgaatatatccaggat
tatgtcaacatatatggtttaaaaatttggcaagaggaagtgtctcgtattattaactac
aacgtggaacaggaatgcaataacttcttaagaacaaagattcaagactggcaaagtata
taccagtctactcatattcctataccaaaattcacacctgtggatgagtctgtaacattt
attggtcgtctttgcagagaaatcctgaggatcacagacccaaaaatcacgtgctatatt
gaccagatgaatacctggtatgatatcaaaactcatcaggaagtaaccaacagtcgtctc
ttctcagagatccaagatactttgggtacctttggtctcaatggcctagacaggctgctg
tgtttcatgatagtaaaggagctgcagaatttcctcagtatgtttcagaaaaatatattg
cgtgacaggtcagtacaagataccttaaaagcgcttatgagtgctgtcagtcccctcaaa
ggaatcatagcaaattcaaacaaggtttattctgcagcaattgcaaaaacacagaagatc
tggacagcttatttagattccataatgaaggttggtcagatgcagattttaagacgacag
attaccaatgaattaaattattcctgcaggtttgactccaagcatttggctgctgctttg
gaaaatctcaataaagcaatactggctgacattgaggcacattatcagaatccattactg
ccttatcctaaagaagacaacactcttttatatgaaatcacagcttatctggaagctgct
ggcattcacaatccattaaataagatctacataacaacaaaacgtctgccatattttccc
accatcaacttcctattcctcatttcccagtttcccaaacttcagtacaacagaaattta
ggagtggtgtgcaagcggccagctgaccaaattgactggcttcctttggttctggggctc
cttaccctgttgaaacagtttcactcaagatacacagaacaatttttggctctgattggt
cagtttattcgttccacaatggagcagtgtacaagccagaagattccagaaatgcctgct
gatgtagtgggtgccctcatgttcctggaagattacattcggtataccaagttaccaaga
aaggttgttgaagcacatgtgccaagcttcatttttgatgaattcagaactgttctatga
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