Lonchura striata (white-rumped munia): 110477046
Help
Entry
110477046 CDS
T05897
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110477046 (MSH4)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Meiosis-specific proteins
Others
110477046 (MSH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
nSTAND3
AAA_22
ATPase_2
AAA_28
AAA_30
AAA_18
Motif
Other DBs
NCBI-GeneID:
110477046
NCBI-ProteinID:
XP_021398126
LinkDB
All DBs
Position
6:complement(35039315..35062001)
Genome browser
AA seq
935 aa
AA seq
DB search
MAGASGRAFASATSESYTGRGSSTPGVGGRAEQAPRYTLGLLQTPHSSESTGGSSSGGAR
PGSSGGEGLAAGRAAGNSAVKPAASERGESYFGDKSSCVENANTLNLTSSSLRGLNSTCI
GKTPLSSGRSGCRSHTPLMGYSVTSSSAVSAHTVASVIVAVVEGRGLARGEVGMASIDLK
NPEMVLSQFADNTTYAKVITKLKILTPLEIIMSNTACDAGNTTKLFSLITEHFKNVTFTT
VQRKYFNETKGLEYIEQLCASEFSTIFMEVQSKYYCLAAAAALLKYVEFIQNAVYAPKSL
KVRFQGSEKTAMIDSSSAQNLELVINNRDSRNGHTLLGVLNYTKTPGGSRRLRSNILEPL
VDAETINTRLDCVQELLQDEELFFGLQAVISKFLDTEQLLSVLVQIPKKDTVKTAESKIT
NLIYLKHTLELVEPLKAALRSCNTQLLKAYYNSLEDTRFGIILEKITSVINDDTRYTKGC
LSMRTQKCYAIKPSINEFLDVARRTYTEIVDDIAGMITQLAEKYSLPMKTGFSSARGFFI
QMNADCSTLPNGQLPSEFTKITKMKNTYSFTSADLIKMNERCRESLREIYHMTYLIVCKL
LKEIYEHIHCLYKLSDIVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKQGWHPILEKIAV
EKPVSNNTYLTEGNNFVIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYCSFRIAEQI
FTRIGMDDDIETNASTFMKEMKEITYIIQNANDKSLIIIDELGRGTSAEEGIGICYAACE
YLLNLKAFTLFATHFLELCHIDALYPNVENYHFQVQHVRSSAGNKEKIAYTYTLSKGYTE
EKNYGLKAAEVSSLPSSIILDAKEITSHIAKQILHRQKSTPEMMKQRAAYQLAMRLVQTA
RNSRLDPDSLRVYLKALKKKYEASCATPRKNDEQQ
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcgagcgggcgggctttcgcctcggccacctcggaatcctacacgggccgc
ggctcttccacgccgggcgtgggtgggcgggcggagcaggcaccccgctacactctgggg
ctgctgcagacgccacacagctcggagagcaccgggggctcctctagcggcggagcacgg
ccgggcagctccggcggggaaggcctcgcagccggccgggccgccgggaacagcgcggtg
aagccggcggcttccgaaaggggagaatcatattttggggacaaaagttcttgtgtagaa
aatgctaacacattgaatctcacgagttcttctctgagaggcctgaatagcacatgtata
ggaaaaacacctctctcttctggtagatctggttgcagaagccatacccctcttatggga
tattcagttacatcctcatctgcagtttctgctcatactgttgcatcggttattgtagct
gtagtagaaggaagaggccttgccagaggtgaagtaggaatggccagtatagatttaaaa
aatcctgagatggtattatcacaatttgcagacaatacaacttatgccaaggttattact
aaactcaagattttaacaccactagaaataataatgtcaaacactgcctgtgatgcaggg
aatacaacaaaattattcagtctgataacagagcatttcaagaatgtgacatttacaact
gtccagagaaaatacttcaatgaaacaaagggtttggagtacatagaacaattgtgtgca
tctgaatttagcaccattttcatggaagtccaatcaaagtattactgtcttgcagctgca
gcagctttgctaaaatatgttgaatttatccaaaacgccgtttatgctcctaaatcactc
aaggttcgtttccaggggagtgagaaaacagctatgatagattcatcatcagcacaaaat
cttgaactagtgattaataacagagattcccggaatggtcacacacttcttggtgttcta
aattacactaaaactcccggtggaagtcgaagacttagatccaatatactggaacctcta
gttgatgctgaaacaattaacacaagactggactgtgttcaggaattactccaggatgag
gaactcttttttggtcttcaagcagttatctcaaaattcctggatacagaacagctactt
tcagttttggtacagattccaaagaaggatacagttaaaactgctgaatccaaaataact
aatttaatctacctgaagcataccttagaacttgtagagcctctgaaagctgctttaaga
agctgtaacacacagctgctaaaggcttactacaattctcttgaagatacaagatttgga
attatacttgaaaagattacaagtgtaattaatgatgatacaagatacacaaaaggatgt
ctgagtatgaggacccagaagtgctacgctattaagcctagtatcaatgaattccttgac
gtagctcgtagaacatacacagaaattgttgatgacatagcaggtatgataacgcaactt
gctgaaaagtacagcctgccaatgaaaacaggtttcagctctgctcgtggattttttatc
cagatgaatgctgattgttcaactttacctaatggccagcttccttcagaatttacaaag
atcacaaaaatgaaaaacacatatagcttcacttcagcagatttaataaaaatgaatgaa
agatgtcgggagtccctgagagaaatatatcacatgacttacttaatagtgtgtaaacta
ctgaaggagatctatgagcacattcattgcttatacaagttgtctgacattgtgtctatg
ctggatatgctgctttcatttgcccatgcctgcactctttccgattatgttcgtccagaa
tttaccgatactttagcaatcaagcagggatggcatcccattcttgaaaagatagctgtg
gaaaagcctgtgtctaacaacacgtacctgacagagggcaacaattttgtcattattaca
ggaccaaatatgagtggaaaatcaacatacttgaaacagattgctctctgtcaaattatg
gcacagattggttcttatgtcccagcagagtattgttcttttcgaatcgcagagcagatt
tttaccagaataggaatggatgatgatattgaaacaaatgcatcaacattcatgaaggaa
atgaaagagataacgtacatcatacagaatgctaatgataaatcactcattattattgat
gaacttggcagaggtaccagtgccgaagaaggtattggaatttgttatgctgcctgtgaa
tatctgttgaacttaaaggcatttacactgtttgctacacatttcctggaactatgtcat
atagacgctttatatcccaacgtggaaaactaccattttcaagtgcaacatgtgagaagc
agtgctggaaataaggagaaaattgcttacacttacacactttctaaaggatacacagag
gaaaagaactacggactaaaagctgcagaagtgtcctccctaccatcatccataattttg
gatgcaaaggaaatcacaagtcacattgcaaaacaaattttgcacaggcagaagagcact
cctgagatgatgaaacagagagctgcataccagttagcaatgagattggttcagactgcc
agaaattcgcgactggaccctgacagtttgcgtgtatatttgaaagccctgaagaaaaag
tatgaagccagttgtgccacacccagaaaaaatgacgagcaacagtaa
DBGET
integrated database retrieval system
