Lonchura striata (white-rumped munia): 110477069
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Entry
110477069 CDS
T05897
Symbol
SHMT2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr00260
Glycine, serine and threonine metabolism
lsr00630
Glyoxylate and dicarboxylate metabolism
lsr00670
One carbon pool by folate
lsr01100
Metabolic pathways
lsr01200
Carbon metabolism
lsr01230
Biosynthesis of amino acids
lsr01240
Biosynthesis of cofactors
lsr04981
Folate transport and metabolism
Module
lsr_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
110477069 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
110477069 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
110477069 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
110477069 (SHMT2)
Enzymes [BR:
lsr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
110477069 (SHMT2)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
110477069
NCBI-ProteinID:
XP_021398155
UniProt:
A0A218UDM7
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Position
29:complement(2568398..2574664)
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AA seq
501 aa
AA seq
DB search
MWPLRLGRTLQRWGARVGTGSRRAQHGPAAAAATGHVPGWTGQESLAESDPEIWSLVQKE
KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDELELLCQRRA
LEAFDLDPARWGVNVQPYSGSPANFAAYTALLQPHERLMGLDLPDGGHLTHGYMSDARRI
SATSIFFESMPYKLDPATGLIDYAQLEVTARLFRPRLLIAGTSAYARLIDYARLKRVCEE
VRAYLLADMAHISGLVAAKAIPSPFEHADVVTSTTHKTLRGARSGLIFYRKGVRSVDKKT
GKETLYDLEDRINFSVFPSLQGGPHNHTIAAVAVALKQASSPAFRGYCQQVLRNAKAMAQ
ALLQRGYTLVSGGTDNHLVLVDLRPKGMDGARAERVLELVSITTNKNTCPGDRSALTPGG
LRLGAPALTSRQFREEDFQKVVEFIDEGIALALDVKSKTSKLQDFKTFLLQDPETQRRLR
DLRQRVETFARAFPMPGFSDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtggccgctccgcctgggcaggaccctgcagcgatggggggcccgggtgggcacgggc
agccggcgggcacagcacggccccgccgccgccgccgccaccgggcacgtccccggctgg
acggggcaggagagcctggccgagagcgaccccgaaatctggagcctggtgcagaaggag
aaggatcggcagtgccgggggctggagctcatcgcctctgagaatttctgcagccgggcg
gcgctggaggcgctgggctcctgcctcaacaacaaatactcggaggggtatcctgggaag
aggtactacgggggggccgaggtggtggacgagctcgagctgctgtgccagcggcgggcg
ctggaggccttcgacctggacccggcgcgctggggcgtcaacgtccagccctactcgggc
tccccggccaacttcgccgcctacacggccctgctgcagccccacgagcgcctgatgggg
ctggacctgcccgacgggggccacctcacgcacggctacatgagcgacgccaggaggatc
tcggccacctccatcttcttcgagtccatgccctacaagcttgatcccgccacaggcctg
atcgactacgcccagctggaggtgacggcgcggctcttccgtccccggctgctcatcgcg
ggcaccagcgcctacgcccgcctcatcgactacgcccgcctcaagcgggtgtgcgaggag
gtccgggcatacctgctggccgacatggcgcacatcagcgggctggtggcggccaaggcc
atcccgtcgcccttcgagcacgcggacgtggtcaccagcaccacgcacaagaccctgcgt
ggcgccaggtcggggctgatcttctaccgcaagggcgtgcgctcggtggataagaagacg
ggcaaggagaccctctacgacctggaggacaggatcaacttctccgtcttcccctcgctg
caggggggaccccacaaccacaccattgctgccgtggctgtggccctcaaacaggccagc
tccccggcgttccgggggtactgccagcaggtgctgaggaacgccaaggccatggcacag
gcgctgctgcagcgggggtacaccctggtgtcaggtggcaccgacaaccacctggtgctg
gtggacctgcggcccaagggcatggacggggcgcgggcagagcgggtgctggagctcgtc
tccatcaccaccaacaagaacacgtgcccgggggacaggagcgcgctgacacccgggggc
ctgcgcctcggtgcccccgcgctgacctcccgccagttccgcgaggaggatttccagaag
gtcgtggagttcatcgacgagggcatcgccctggccctggacgtcaagagcaaaaccagt
aagctccaggacttcaagaccttcctgctgcaggacccggagacgcagcggcgcctgcgc
gacctccgccagcgcgtcgagaccttcgcccgtgccttccccatgcccggcttcagcgac
cactga
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