Lonchura striata (white-rumped munia): 110477073
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Entry
110477073 CDS
T05897
Symbol
GLI1
Name
(RefSeq) zinc finger protein GLI1
KO
K16797
zinc finger protein GLI1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110477073 (GLI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110477073 (GLI1)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
110477073 (GLI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
DUF7565
Motif
Other DBs
NCBI-GeneID:
110477073
NCBI-ProteinID:
XP_021398159
LinkDB
All DBs
Position
29:complement(2461369..2470144)
Genome browser
AA seq
1266 aa
AA seq
DB search
MFDPAGPQAAGYSEYCCLHPPHGPAPAAPGPPGLDFPVCHQPGHRGYGLAPGAEHPADGS
RFSTPRGAGKLGKKRALSISPLSDSSIDLQTVIRTSPNSLVAFINSRCASSGGSYGHLSI
STISPSLGYQSPPGQQKGQGHLYTPPPPCSTHELPTRPGLLHQAPTRGALKHCQQLKLEW
SLSSPLSAKFPEERSEGDISSPASTGTQDPLLGMLDVREELEKEDGKPECEAVYETNCYW
DGCAKEFDTQEQLVHHINNEHIHGEKKEFVCHWAACSREQRPFKAQYMLVVHMRRHTGEK
PHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNE
KPYVCKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKHRGDVGPGRALPTPSAPPDMKQE
KDANGPGEARKDDGKLLVPELALKPQPSPGGQSSCSSDHSPLGSTTNNDSGVEMAGNAGG
SYEDLSTLEDVVPGEPMGTSGLMALHKLENLRIDKLKQLRKPAASKGLNLPPIPGAGLPG
EVPGVPVPPPASHRRIAELSAAELGLVAPGERRSSGTSTVSSAYTVSRRSSLVSPYLAGP
CPGGEAGAVPGGTCPADGFDATSPDESRRSGDVCGGLPGVGSLTPAQRYRLKAKYAAATG
GPPPTPLPGGHGGVPGGYPAPAGPRCVANGLLRRHSSNDHPGYPGGVPAQLAPRHGVRRA
SDPARTVAKPPAVPRVQRFKSVGNVSVPGVGRTALQPLGGSEANLQHHGFSPRPPSITEN
VFLESMGGPGPESGLLDMDQYLSYPEESFPCQGTGVELQGGIYGAQRTMVGTHGDMEEGL
EFSLPQCQMNQRFPSLPAGNGAVPEPWDGSPQGPLGMSSRQSVAAAAPAMPGPHCPHQNM
EYPHPSACGQHPKLVSSCQDQEFSGGHRFNRLQIKSEQRYPAPSPALAPCPGAKLAGPPA
SPAAFGHAVDVGPGGFPPVGPAPGGYMGMASPGARRAPTPTLQTKEVMVRNYVEAQQALM
WGEQPHSKGSVAGVGLGNEPGQCQAVPAPPYLSPRYCSYQPKPDHLQSLAEPQHLLSPPC
FNPEMIPHPPGGPKPPAHQPSLSYPSGLAQPGHGYDGVDGGARRLPRLPPARPVPEGSGN
LPLYYPGQGPHGQGGKGGHKLLGQGAASCGGSGHYGAEGPKGTSCYYLDSGEQVANSLDS
LDLENTHLDFAAIVEDVETPTALPGPPGPTGGLLLPSSGGANMAVGDMSSMLSTLAGESH
FLDSLS
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaccccgcgggaccccaggccgccggctacagcgagtactgctgcctgcaccca
ccccacgggccagcccccgccgccccgggaccaccagggcttgatttccccgtgtgccat
cagcctggccaccgtgggtatgggctggcaccaggagctgaacaccccgctgatggctcc
cggttctctacgccccgtggtgcaggaaagctggggaagaagcgggcactgtccatctcc
cctctgtccgactccagcatcgacctgcagaccgtgatccgcacctcccctaactccctg
gtcgccttcatcaactcccgctgtgcctcctccggcggctcctacggccacctctccatc
agcaccatcagcccgtccctggggtaccagagcccgcctgggcagcagaagggccaaggc
cacctgtacacgcctcccccaccctgcagcacccacgagctgcccacgcggccggggctg
ctgcaccaggcacccactcgtggggccctgaaacactgccagcagctgaagctggagtgg
agcctgagcagccccctgagcgccaaattcccagaggagagatctgagggcgacatctcc
agcccggcatccacaggcacccaggaccccttgctgggcatgctggacgttcgggaagag
ctggagaaggaggatggcaaacccgagtgtgaggctgtgtatgagaccaactgctactgg
gacggctgtgccaaggagttcgacacacaggagcagctggtgcaccacatcaacaacgag
cacatccacggggagaagaaggagttcgtgtgccactgggccgcgtgctcgcgggagcag
cggcccttcaaggctcagtacatgctggtggtgcacatgcggcgccacacgggcgagaag
cctcacaagtgcacgtttgagggatgtaacaaggcctattcccgcctggagaacctcaag
acccacctgcgctcgcacacgggcgagaaaccctacgtgtgtgagcacgagggctgcaac
aaagccttctccaacgcctccgaccgcgccaagcaccaaaaccgcacccactccaacgag
aagccgtacgtgtgcaagattcccggctgcaccaagcgctacacggaccccagctccctg
cggaaacacgtcaagaccgtgcacggccccgacgcccacgtcaccaaaaagcaccgaggg
gacgtggggccgggccgggcactgcccacccccagtgcccccccggacatgaagcaggag
aaggatgcaaacggccccggcgaggctcggaaggacgatgggaagctcctggtgcccgag
ctggccttgaagccgcagcccagcccaggtgggcagtcctcgtgcagcagcgaccactcg
cccctgggcagcaccaccaacaacgacagcggcgtggagatggcaggaaacgccggcggc
agctacgaggacctgtccactctggaggacgtggtgcccggggagcccatgggcacctcg
gggctcatggccctccacaaactggaaaaccttcgcatcgacaagctgaagcagctgagg
aaaccagcggcttccaagggcctgaacctgccacccatccccggagccggcctgcccggg
gaggtgcccggtgtcccggtgccacccccagcctcgcaccggcgcatcgccgagctgtcg
gcggcagagctgggcttggtggcgccgggcgagcgccggagcagcggcaccagcaccgtc
agctctgcctacaccgtcagccgccgctcgtccctggtgtcgccgtacctggccgggccg
tgcccgggcggcgaggccggagcggtgcccggcgggacgtgcccggcggacggcttcgat
gccacctctccagacgagtcgcggcgctccggcgacgtgtgcggggggctgccgggggtg
ggcagcctcaccccggcacagcggtaccgcctcaaggccaaatacgccgcggccaccggc
ggcccaccgccgaccccgctgcccggcggccacggcggcgtgcccgggggctaccccgcg
cccgccgggccgcgctgcgtcgccaacggcttgttgagaaggcacagctccaacgaccac
cccggctacccgggtggcgtccctgctcagctggcgccccggcacggcgtgagacgggca
agcgaccctgcccggacggtggccaagcctccggccgtgcccagggtacagcggtttaag
agcgtgggcaacgtgagcgtgccaggcgtgggcaggacggcgctgcagcccctgggcggc
tccgaggccaacctgcagcaccacggcttctccccacgcccccccagcatcaccgagaac
gtcttcttggagagcatggggggccccggccccgaatccggcctgctggacatggatcag
tacctgagctaccccgaggaaagcttcccgtgccagggcaccggtgtggagctgcagggt
ggcatctacggtgctcagcggaccatggtggggacgcacggggacatggaggaggggctg
gagttctccctgccgcagtgccagatgaaccagcgcttccccagtttgcctgctgggaac
ggggctgtgccggagccctgggatggatccccccagggcccgctggggatgagctccagg
caaagtgtggctgctgcagctcccgccatgcccgggccgcactgtccccaccaaaacatg
gagtacccccatcccagcgcctgcgggcagcatcccaaactggtgagctcatgccaggac
caagaattttccggggggcatcggtttaaccggctgcagatcaaatccgagcagcggtac
ccagcgccgagcccagcacttgctccctgccccggtgccaagctggccgggcccccggcg
tcccccgctgccttcggccacgccgtggacgtggggccgggcgggtttccccccgtggga
cccgcgccgggcgggtacatgggcatggccagcccgggcgcccgcagagccccgaccccc
accctgcagaccaaagaggtgatggtccggaactacgtggaggcgcagcaggcgctgatg
tggggggagcagccccactccaagggcagcgtggcaggcgtggggctgggcaacgagccc
gggcagtgccaggccgtgccagccccgccgtacctcagccccaggtactgcagctaccaa
cccaaaccagatcatctgcagagcctggcagagccccagcacctcctgagcccgccctgc
ttcaaccccgagatgatcccgcaccctccaggtggcccgaaaccaccggctcaccaaccc
agcctgagctacccgagcggcctggcacagccggggcacggctacgatggggtggacggt
ggtgcccggcgcctgccgcgcttgccccccgcccgccccgtgcccgaggggtccgggaac
ctccccctgtactacccaggccagggcccgcatgggcaggggggcaaaggtgggcacaag
ctgctgggccagggggcagcgagctgcggggggagcgggcactacggcgcagagggaccc
aagggcacctcctgctactacctggactcgggggagcaggtggccaacagcttggactcg
ctggacctggagaacacgcaccttgacttcgctgccattgtggaggacgtggagaccccc
acagcactgcccggaccccccggcccgaccggggggctcctgctgccctcgtctgggggt
gccaacatggcagtgggggacatgagctccatgctgagcacgttggcaggggagagccac
ttcctcgactcgctgtcctaa
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