Lonchura striata (white-rumped munia): 110477104
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Entry
110477104 CDS
T05897
Symbol
FGD5
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 5
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
110477104 (FGD5)
Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
110477104 (FGD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
RHG20_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
110477104
NCBI-ProteinID:
XP_021398207
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All DBs
Position
12:complement(20848460..20928073)
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AA seq
1592 aa
AA seq
DB search
MNNAEISKPPLAPKPKIIGHLSPAPVSKFSPSLPRADILHHPNSVSRGPKPPIAPKPKFS
ADTEGKSSVSNNNNLNKCANGKLVCLGGELCEGNQCNADCLGSDADNEYIVVPAAQPLRR
DSNDLEHEHDQNLDSSVENEVSEIPEKVEKEEDSITSDENTSNREVIEDEHCNSSDTAEP
REPDSEESSRDCDQSKALCEESFDAPDRDNNATKNVDKDEDVVDDCTETKTRQETSYNLE
LVKNSSDCKSYNDNILNRGEKLMGNTCRDTIAMPLPADESIPACEKVRQEKEEELPEILE
MADGCLAQNDDRSVRAELDLNMEEDLENDDCASPDMLPEEASEETDLDLELCGDKLSAKN
SLAELIHQAAVEDEEVDPNEHNNTNMGNASDGYQITERKSEKTSEVASEASKDSGKEEEE
TVNAENMDDRCQISPCENECHKEIPVEHSDEDLQTEEASLHEDVMISDSLPCSLGMEPEL
EAVTVEEHSGNTVEASKSDELQLKDNEVEANSLSKSVPSSPQEVPLEDDLEICKHGKNDV
ECGTKHVVHENLAVPEVVIVTDESEERETSSDSPDDPYVLPEENDTVYDVQTDLGADHSK
RGELGMDGENNLLPTDRKSIVTRTRSLSGRMPGYVPETVPEETGPETDLPSSRNGSGIEE
LSNNSFSLEGQPVEANKALPTKSRRFILYPRSYSVEGREIPISVYRESDVCVLDGVRIKK
TEDNLSLPCVNGSSGSFSQQNHLSSCGISTPSSVVDIPPPFELAYITKKPITKSSPSLLI
ENDSPAKYSKKKKSSFKKFLTLKFKKKTENKVHVDVNVSSSRSSSESSYHGPPRLMELEG
RSLSSSPQLKSHMGKLRASESPSAVLFYKDGKRKGTPKSFSRSVSRVESFEDRSRPPFMP
LPLTKPRSISFPNADTSDYENIPAMSSDYENIQIPPRRSTRAGTFTEFFEDPSRALSAAN
ENDGYVDMSSFTGFENKQQTTDQETESAYTEPYKVCPVSVTPMEVVTSDEEQNSSEDDES
SLDDASLTNKKEGQSRAYLIAQELMSSEKVYVEMLQLLRMDFYEGILKVLGDDDENEQEE
VKLKQGLSELPEIYDLHQDILEELEERVHKWDEHQKVADVFLSRKSRLNHHTAYIMQFDR
NLALLDEMCLKYSQLATMIQEFEQSSSDSPYSVKHQLLKVVHRVFQYRVILTDYLNNLCP
DSTEYEATQAALFIVSEITDQANDSMLQAENLQKLVHIEHSVRGQSGLLQPGRIFVKEGT
LMKISGKNRHPRHLFLMNDVLLYTYPQKDGKYRLKNTLAVSSMKVSRPVIEKAQNILKIE
YDEHCLTLSASSCSERDDWYSCITKHIPDDCKAHKTSTFHSSVELRERLGIPLGESPPTL
VPVSHVMMCMNCGCDFTLTLRRHHCHACGKIVCRNCSRNKYPMKYLKDQAAKVCDSCYVE
LKKRERPLSVSFPPTSSRCSSSAFSSVFHNIHYSSFKKQKKIPSALMEVAASGEGATISG
YLSRCKGGKRHWKKRWFVIKGKVLYTYIANEDKVATESLPLLGFTIAPEKEEGSLDTVFH
LYHKQTLFYSFRAEDYNSAHRWIEAMEEASIL
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgccgaaatctcaaaaccaccattagcaccgaaaccaaagattattggtcat
ctttctccagcacctgtctccaaattttctccttcactgccaagagctgatattcttcat
cacccgaactctgtgtctaggggtcccaaaccacctattgctcccaagccaaaattctca
gctgacactgagggcaaatccagtgtttctaacaacaataatttaaataaatgtgcaaac
gggaaactggtgtgtcttggtggagaactgtgtgaaggaaaccaatgcaatgctgattgc
ctaggatctgacgcagataatgaatacattgtagttcctgcagctcagccgctcagaaga
gactctaatgatttggaacatgagcatgatcaaaacctagattcctctgtggaaaatgaa
gtctcagaaattccagaaaaggtagagaaggaagaggatagcattactagtgatgagaat
accagtaatcgagaagtcatcgaagatgagcactgtaactcttcagatactgctgaacca
agggaaccagactctgaggagtcatccagagactgtgaccagtccaaagcactttgtgag
gagtccttcgatgccccagatagggataacaatgctaccaagaatgtagataaagatgag
gatgttgtagatgactgtactgaaaccaaaactaggcaagaaacttcttacaacctggaa
ctggtcaagaacagtagtgattgtaagagttacaatgataacatcttgaatagaggtgag
aaactaatgggtaatacttgcagagataccattgcaatgccactgcctgcagatgaatca
atcccagcatgtgagaaggtaagacaagagaaggaggaggaactgcctgagattttagaa
atggcagatgggtgtctagcacaaaatgatgaccgcagtgtgcgtgcagagcttgatttg
aacatggaagaggacttagaaaatgatgactgtgcaagccctgacatgctgcctgaggag
gccagtgaagagacagatcttgacttagaactgtgtggagataaactcagtgccaaaaat
agtttagcagagttaatccatcaagcagcggttgaagacgaggaagtagacccaaatgag
cacaataatacaaacatgggaaatgccagtgatggctaccagatcactgagaggaaaagt
gagaagacatcagaggtagcctctgaagcaagcaaagactctggaaaagaggaagaagaa
actgtgaatgcagagaatatggatgataggtgtcaaatttcaccttgtgagaatgaatgt
cacaaggaaatacctgtggaacattcagatgaggatcttcaaacagaagaggcctctctg
catgaagatgtcatgatttctgatagtctaccttgtagtctggggatggagccagagcta
gaagctgtaactgttgaagagcatagtggaaatactgtggaagcctctaagtcagatgag
ttgcaactcaaagacaatgaggtggaagcaaacagcctcagcaaaagtgtcccaagttca
cctcaagaggtcccacttgaggatgacttggaaatctgtaagcatggcaaaaatgatgta
gaatgtgggaccaaacatgttgtgcatgaaaatctagcggtccctgaagtggtcattgta
actgatgaatcagaggaaagagaaactagcagtgattccccagatgacccttatgtgctt
cctgaagaaaatgatactgtctatgatgtgcagactgatttaggagctgatcacagtaaa
aggggtgaattaggcatggatggtgaaaacaacttgctgcccactgatcgtaaaagtatt
gtcactagaacacgatctctctctgggagaatgccaggctatgtcccagaaactgttcca
gaagaaactggacctgaaactgatttaccctcttcccgaaatggctctgggatagaagaa
ctgagcaataattccttttcattggaaggacagccagtggaagccaacaaggctttacca
accaagtcaagacgctttattttatatcctcgatcttattctgttgaagggagagagata
cctatctctgtttacagagaaagtgatgtctgtgtactggatggtgttagaataaaaaag
acagaagacaacttgtccttgccttgtgtcaatggttcctcaggtagtttttcccagcaa
aatcatctctcatcatgtggcatatctactccatcctcagttgttgatataccacctcca
tttgaacttgcctacatcaccaaaaagccaatcactaaaagttcaccttcacttttgata
gagaatgactcacctgctaagtattccaagaaaaagaaatcttcttttaagaagtttctt
actctaaagttcaagaagaaaactgaaaataaagttcatgtagatgttaatgtttcttct
tcaaggtcctcatcagaatccagctatcatgggcctcccaggctgatggagctggaagga
aggagtctgagtagctcacctcaactaaaatcgcatatggggaagctccgtgcatctgag
tctccctctgctgttcttttctataaggatggtaaaagaaaaggaacacccaagtccttc
agcaggagtgtgtcaagggtggagtcctttgaggaccggtccagacctcctttcatgcca
ctaccattaacaaaacctaggtctatttcttttcccaatgctgacacatctgactatgag
aacattcctgctatgagctctgactatgaaaacatacaaattcctcctcggagatccacc
agagcaggaacttttaccgagttttttgaagatcccagcagggcattatctgctgctaat
gagaatgatggctatgtggatatgagcagcttcactggctttgagaacaagcagcaaacc
acagaccaggaaacagaaagtgcctacactgagccctacaaggtgtgcccagtctctgtg
acaccaatggaagttgtcacatcagatgaggaacaaaacagttcagaagatgatgagagc
agccttgatgatgccagtctcaccaacaagaaagaaggccagtccagagcttacctcatt
gcccaggaactaatgtcttcagaaaaagtatatgtggaaatgctccagttgttacgtatg
gatttctatgaaggtatcttgaaagtccttggagatgatgatgaaaatgaacaagaggaa
gttaaactcaagcaaggtttaagtgaactccctgaaatttatgacttacaccaagacatc
ctggaagaactggaagagagagtccataaatgggatgaacaccagaaagttgctgatgtt
tttctctccagaaaatcaaggctgaatcaccacacagcatacattatgcaatttgacagg
aatttggctttgctagatgaaatgtgccttaaatattcccaactggcgaccatgattcag
gagtttgagcagagctcaagtgacagcccttacagtgtgaaacaccagcttctgaaagtg
gtacaccgtgtcttccagtatcgtgtgatactcacagattacttgaataatctttgtcct
gattctacagagtatgaagccacacaagctgccttattcattgtttctgaaatcacggac
caagccaatgacagcatgctccaggcggaaaacttgcagaagctagtacacattgagcac
agtgtaagagggcagagtggcctcctccagccaggaaggatctttgttaaagagggaacc
ctgatgaaaatctctggcaaaaacaggcatcctcgacatttgttcttgatgaatgatgtt
ctgctgtacacatatccccagaaggatggcaaataccgactgaaaaacactttggctgtg
tcaagcatgaaggtcagtcgcccagtgatagagaaagcccaaaatatcttgaagattgaa
tacgatgaacattgcctgaccctgtcagcaagctcttgctcagaaagggatgactggtac
agctgcatcaccaaacacatcccagatgactgcaaagctcacaagacttcgactttccac
agtagcgtggagctaagggaaaggcttggaataccattgggtgagagtcctcctacactg
gtgcccgtgtcccatgtcatgatgtgcatgaactgtggctgtgacttcaccctcactttg
aggcgacatcattgccatgcctgcggaaagattgtatgtcgaaattgttcaagaaacaag
taccccatgaagtacctcaaagatcaagcagccaaagtctgtgatagctgctatgtggaa
cttaagaaaagagagcggccactaagtgtgagcttccctccaacttcatccaggtgttca
agcagtgccttctcctctgttttccacaatattcattattcatcttttaagaaacagaag
aaaatcccttcagctctcatggaggtggcagcctcaggagagggagctaccatcagtggt
tacctcagcagatgtaaggggggcaaaagacactggaagaaacggtggtttgttatcaaa
ggcaaagttctctacacctacatagcaaatgaggacaaagttgctacagaaagtttgcct
ttgttgggtttcaccattgctccagaaaaggaagaaggaagcttggatacagtttttcat
ctctaccacaagcagacgctcttttatagcttccgagcagaggattacaattcagcacac
aggtggattgaagccatggaagaagcatccatattatag
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integrated database retrieval system
