Lonchura striata (white-rumped munia): 110477243
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Entry
110477243 CDS
T05897
Symbol
IRF2BPL
Name
(RefSeq) probable E3 ubiquitin-protein ligase IRF2BPL
KO
K22383
interferon regulatory factor 2-binding protein
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110477243 (IRF2BPL)
04121 Ubiquitin system [BR:
lsr04121
]
110477243 (IRF2BPL)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
110477243 (IRF2BPL)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Atypical E3
110477243 (IRF2BPL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
DUF7623
Motif
Other DBs
NCBI-GeneID:
110477243
NCBI-ProteinID:
XP_021398487
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All DBs
Position
5:21989410..21995047
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AA seq
737 aa
AA seq
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MSAAQVSSSRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRIEFVIETARQLKRA
HGCFQDGRSPGPPPPVGVKAVTLSAKEAAAAAAQQQLNHVDATSKAASAGLTQSSLDRYG
LSAAAAEQRSRFEYPPPPGSLGSSHGARLPNGLGGPNGFPKQPEDGPPELNRQSPNSSSS
SSSSRRGAHGGLVSGLPPGAAGAQMNVPPNLLPQTLLNGPAASGVALPPPHGGLSGRGGG
GPPAPSASSQGGTCGGGAGGGGGSSSEACGKRPGSVSSSDQERELKEKQRNAEALAELSE
SLRNRAEEWASKPKIVRDTLLTLAGCTPYEVRFKKDHALLGRVFAFDAVSKPGMDYELKL
FIEYPSGSGTVFSSASGVAKQMYQDCMKDFGRGLSSGFKYLEYEKKHGSGDWRLLGDLLP
ESVRFFKELVGADMLPQPYLDASCPMLPTALVSLPRPGAGAGGAQGTAAASRGPGGGGGG
GGGGAMRKRKASPEPSDSAEGALKLSDEQQRQQWMASQSEALKLTMSAGGFGAVHGGGPP
PPPPLGPHSNRTTPPESAPQNGQSPMAALMSVADTLGNAHSPKDGSSVHSTTSTRRNSSS
PVSPASVPGQRRLASRNGDMNLQVAPPPPSTHPAMDQVHPQNIPDSPMANSGPLCCTICH
ERLEDTHFVQCPSVPSHKFCFPCSRESIKAQGATGEVYCPSGEKCPLVGSNVPWAFMQGE
IATILAGDVKVKKERDP
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgcgcaggtgtcctcgtcgcggaggcagtcatgctacctatgcgatctgccc
cgcatgccctgggccatgatctgggacttcacggagcccgtctgccggggctgcgttaat
tatgagggcgccgaccgcatcgagttcgtgatcgagacggcccggcagttgaaacgggcg
cacggctgcttccaggacggtcgctccccgggccccccgccgccggtcggcgtaaaggca
gtgacgctctccgccaaagaagcggcggcggcggcggcccagcagcagcttaaccatgtg
gatgccacctccaaggcggcctcggcggggctgacccagtccagcctggaccgctacggg
ctcagcgccgccgcggcggagcagcgcagccgcttcgagtacccgccgccgccgggcagc
ctgggcagcagccatggcgcccgcctgcccaacggactgggaggccccaatggcttcccc
aagcagcctgaggacgggccaccggagctgaaccggcagagccccaactcctcctcctcc
tcttcctcctctcgtcgcggggcgcacggtgggctcgtgtctggcctgcccccgggggct
gccggcgctcagatgaacgtgcccccgaacctgctgccgcagacgttgctgaacggcccc
gctgcctccggcgtggcgctgcctccgccgcacgggggcctgagcggccgcggcggcggg
ggtccccccgctccctccgcctcttcccaggggggcacctgcggcggcggtgccggggga
ggcggcggctcgtcctccgaggcctgcggtaagcggccgggctcggtatccagcagtgac
caagagcgggagctgaaggagaagcagcgcaacgcggaggcgctggccgagcttagcgag
agtttgcggaatcgcgccgaggagtgggccagcaaacccaagatcgtgagggacacgctg
ctcaccctggccggctgcaccccctacgaggtgcgcttcaagaaggatcacgccctgctg
ggccgcgtctttgccttcgacgccgtctccaagccgggcatggactatgaactgaagctc
ttcatcgagtaccctagcggctccggcaccgtcttctccagcgcctccggcgtggccaag
cagatgtaccaggactgtatgaaggacttcggccgcggcctctcctcgggcttcaagtac
ctggagtacgagaagaagcacggctctggcgactggcggctcctgggggacctgctgccc
gagtctgtgcgcttcttcaaggagctggtgggcgccgacatgctgccgcagccctacctg
gacgccagctgccccatgctgcccacggcgctggtgagtctcccgcggccgggggccggg
gccggcggggcgcagggcacggccgccgcctctaggggacctggcggtggcggcggcggc
ggcggcggcggagcgatgcgcaagaggaaagcctctcctgaaccctcggattcggccgag
ggggctctgaagctcagcgacgagcagcagcgccagcagtggatggccagtcagagcgaa
gcgctcaagctcaccatgtcggccgggggcttcggggcggtgcatggcgggggtcccccg
ccgccgccgcccctcgggcctcactccaaccggaccacgccacccgagtccgccccccag
aacggacagtcccccatggccgccctcatgtcggtggccgacacgctgggcaatgcccac
tcgcccaaggacggcagctcggtgcactccaccacgtccacccgcaggaacagcagcagc
cccgtgtcgccggcctcggtgccgggccagcgtcgtctggcctcccgtaacggggacatg
aacctgcaagtggcccctcctccccccagcacccaccccgccatggaccaagtgcacccg
caaaacattccggactcccccatggccaacagtgggcccctgtgctgcaccatttgccac
gaacgcttggaggacacccactttgttcagtgcccctctgtgcccagccacaagttctgc
ttcccttgttccagagaaagcatcaaggcccaaggggcgactggtgaagtctactgcccc
agtggagagaaatgccccctagtcggttccaatgtgccttgggcatttatgcagggcgag
atcgcgaccattttagctggggacgttaaagtgaaaaaggagagagacccttga
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