Lonchura striata (white-rumped munia): 110477252
Help
Entry
110477252 CDS
T05897
Symbol
SPTLC2
Name
(RefSeq) serine palmitoyltransferase 2
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr00600
Sphingolipid metabolism
lsr01100
Metabolic pathways
Module
lsr_M00094
Ceramide biosynthesis
lsr_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
110477252 (SPTLC2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lsr01007
]
110477252 (SPTLC2)
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
110477252 (SPTLC2)
Amino acid related enzymes [BR:
lsr01007
]
Aminotransferase (transaminase)
Class II
110477252 (SPTLC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Rep3_C
Motif
Other DBs
NCBI-GeneID:
110477252
NCBI-ProteinID:
XP_021398505
LinkDB
All DBs
Position
5:21646882..21724831
Genome browser
AA seq
549 aa
AA seq
DB search
MERPERPRANGCGGAHGALRNGFVRGPPGTQINHIVHNGGLYKRPFNEAFEETPMLVAVL
TYVGYGVLTLFGYLRDFMRQWKIEKCQNATEREEQKDFVPLYQDFENFYNRNLYMRIRDS
WNRPICSVPGAKVDMMERVSHDYNWTFTYTGRVIKDIINMGSYNYLGFAQKTGACQEAAA
EVLSQYGAGVCSTRQEMGNLDKHEELEKLVARFLGVESAMAYGMGFATNSMNIPALVGKG
CLILSDELNHASLVLGARLSGATIRIFKHNNMQSLEKLLKDAIVHGQPRTRRPWKKILIL
VEGIYSMEGSIVRLPEVIALKKKYKSYLYLDEAHSIGALGPSGRGVVDYFGLDPEDVDVM
MGTFTKSFGAAGGYIGGKKELIDYLRTYSHSAAYATSMSPPVVEQIITSVKCIMGEDGTT
IGRARVQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLYMPAKIGAFGREMLKRNIGV
VVVGFPATPIIESRARFCLSAAHTKEMLDTALKEINEVGDLLQLKYSRRRLVPLLDRPFD
ETTYEETED
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggagcggcccgagcggccccgcgccaacggctgcggcggcgcccacggcgcgctccgc
aacggcttcgtgcgcggcccgcccggcacacagataaatcatattgtgcacaatggagga
ttatacaaaaggcctttcaatgaagcttttgaagaaacaccaatgctggttgctgtgctg
acctatgtaggctatggtgttctcactctctttggatatctgcgagatttcatgcggcag
tggaagattgagaagtgtcaaaatgcaacagaaagagaagaacagaaggactttgtccca
ttgtaccaggactttgaaaatttctacaacagaaacctctacatgcgcattcgggacagc
tggaaccgtccaatctgcagtgtgccaggggccaaagtggacatgatggagagagtttcc
catgactataactggacattcacatacacagggagagtgataaaagacatcataaatatg
ggttcctacaactaccttgggtttgcacagaagactggggcttgccaagaagcagctgct
gaagttctgtcccagtatggagctggggtgtgcagcactaggcaggaaatgggaaacttg
gacaagcatgaggagctggaaaagctagttgcccggtttctaggtgtggaatctgcaatg
gcatatggaatgggatttgcaaccaactctatgaacattcctgctttagttggcaagggg
tgtctgattctgagtgatgagctgaatcatgcatcgctagtgcttggagcaagactgtca
ggagcaactattcgaatctttaagcacaacaatatgcaaagcctggagaagctgctcaaa
gatgctattgtgcatgggcaacctcgtacacggaggccctggaaaaaaattcttatcttg
gtggaaggaatatacagtatggagggatccatagtccgtttgcctgaagtcattgccctt
aagaagaagtacaaatcctatctgtaccttgatgaagctcatagtataggtgccctgggt
cccagtggccggggtgtagtggattattttggactcgatcctgaagatgtggatgttatg
atgggaacattcacaaaaagctttggagctgcaggaggatacattgggggcaagaaggaa
ttgattgattacctcaggacatactctcacagtgctgcgtatgcaacatcaatgtcacct
cctgttgtggagcaaatcatcacctccgtgaagtgcattatgggtgaagatggtacaact
attgggagagcacgtgtgcagcagctagcagagaacacaagatatttcaggagacgactg
aaagagatgggctttatcatctatggaaatgaagattctcctgttgtgcctctgatgctg
tacatgccagcaaaaattggcgcattcggccgtgagatgctgaagcggaacatcggtgtt
gtggttgtgggcttccctgccacccccatcatcgagtccagagccagattctgtttgtct
gcagctcataccaaagagatgcttgatacagctttaaaagaaatcaatgaagttggggac
cttttgcaactgaaatattcccgtcgccgtttggtacctctcttggaccggccgtttgac
gagacaacatatgaagaaacagaagactga
DBGET
integrated database retrieval system
