Lonchura striata domestica (Bengalese finch): 110477264
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Entry
110477264 CDS
T05897
Symbol
GTF2A1
Name
(RefSeq) transcription initiation factor IIA subunit 1
KO
K03122
transcription initiation factor TFIIA large subunit
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110477264 (GTF2A1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsr03021
]
110477264 (GTF2A1)
Transcription machinery [BR:
lsr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIA
110477264 (GTF2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIA
Motif
Other DBs
NCBI-GeneID:
110477264
NCBI-ProteinID:
XP_021398555
LinkDB
All DBs
Position
5:20100842..20127219
Genome browser
AA seq
376 aa
AA seq
DB search
MASSTNTNPVPKLYRSVIEDVINDVREVFLDEGVDEQVLMELKTLWENKLMQSKAVDGFH
SEEQQLLLQVQQQQQQQQQQQHHHHHHHTPQPQQTVQQQSQPQQVLIPASQQAPQQQVIV
PDSKLIPHMNASGMSAAATAATLALPAGVTPVQQILTNSGQILQVVRTANGAQYIIQPQQ
PVVLQQQVIPQMQPGGVQAPVIQQVLTPLPGGLSQQTGVIIQPQQILFTGNKTQVIPTTV
AAPTPAQAQIPAAGQQQPQQQQAQPQAPLVLQVDGTGDTSSEEEDDEEEEYDDDEEEEKE
KDGGEDGQVEEEPLNSEDDVSDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNL
NGRDYVFSKAIGDAEW
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctcgactaacacaaaccccgtgcctaaattgtacaggtctgtaattgaagat
gtcattaatgatgtcagagaagtttttctggatgaaggagtggatgagcaagttctcatg
gaactcaaaacactgtgggagaacaagctgatgcagtctaaggctgtagatggcttccat
tcagaagagcagcagcttttattgcaggtgcaacaacagcaacaacagcagcagcaacag
cagcatcatcaccaccatcatcacacacctcagccgcagcagactgtgcagcagcagtct
cagccacaacaggtccttattccagcatctcagcaagcacctcagcagcaggttattgtg
ccagattccaagctgataccacatatgaatgcatcaggcatgagtgctgcagccactgca
gctacattggctctccccgctggtgttactccagttcagcagatactcacaaattcaggc
cagattctccaagtagttagaactgcaaatggagctcagtatattattcaaccacagcag
ccagtggttctacagcagcaggttataccccaaatgcagcctggtggagtacaagcacct
gttattcagcaggttttgactcctctccctggagggctttcccagcagacaggagtgatt
attcagcctcagcagatcctgtttacaggaaataaaactcaagttatacctacaacagtg
gctgcccctacaccagctcaagcacagattcctgcagctggtcagcagcagccacagcaa
cagcaggcacaaccacaagcaccgcttgttctccaagttgatggaactggggacacatcg
tctgaagaagaagatgatgaggaagaagagtatgatgatgatgaagaggaagagaaagaa
aaagatgggggtgaagatggccaagttgaagaggagcctctgaacagtgaagatgatgtg
agtgatgaggaaggacaagaactctttgatacagaaaatgttgttgtgtgccagtatgat
aagattcacagaagtaaaaacaaatggaaatttcatctcaaagatggcatcatgaatctt
aatggaagagattatgtattttccaaagccattggggacgcagaatggtga
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