Lonchura striata (white-rumped munia): 110477280
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Entry
110477280 CDS
T05897
Symbol
MLH3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110477280 (MLH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsr03400
]
110477280 (MLH3)
DNA repair and recombination proteins [BR:
lsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
110477280 (MLH3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
DNA_mis_repair
MutL_C
HATPase_c
Motif
Other DBs
NCBI-GeneID:
110477280
NCBI-ProteinID:
XP_031360832
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Position
5:22910408..22930637
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AA seq
1402 aa
AA seq
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MIKRLVEDVRARLRSEVTVNSLGHCVEELVLNSIDAKATCVAIRVDLEAFKIQVVDNGSG
MGKEDLKAVGKRYFTSKCSSVRDLENLTFYGFRGEALASIANMASVVEISSKTSRTAKTF
MKLFHNGQALEVCEAELDRPSGGTTVTVCNLFHQLPVRRKCMDPVLEIERVRQKVEAVSL
MHPSVSLSLRNDVSCSMVLQLPKTRDVYSRFCQIYGLGRSQKLREINHKSGGFEISGFIS
TEGHYNKNMQFLYVNRRLVLKTRLHKLIDFLLRKESVICKAKSVPANRQASSSPGHHRSG
PELYGIFILNVTCAYSDYDVCLEPAKTLIEFQNWDVLLTCIEEGVKIFLKREHLFIEPCS
EDIREFNERNDFCLHNAPVLKPSILDEKSIQESFKKACNEIVDSYEIYSLQSKDVKRKSI
TGKKSSNLTESSKNIQETKNAPVQNTAESSDPCKNNKAEIPLPSKDDTISDLIKSNTSEQ
EPKYTKSSQKVSDTHLKPSEHLCSSFSGGPRSEIREIDGCGDLGDCAENSIKDVGSQQGQ
VTQESSKVLVLNKDVIQSLLEREDPTETAVAPETVSGSSLMRLCNARRNRGIAEVIDDAR
RGAVSSMPLKLCLTDLIKSVIQNESPHDCEQTETNPALNTPCRPGPVSAKDIFDHKVNVV
IQSSNAKGISSNTNKEYTASLTRQVGMTDGNENKPLSHRRREEIAVPTAAHKRPYEMLNN
TELPLASSSGIPRKKIVIKTTRKQIAVPRSQPSKKLSLSTQLGSLEKFRRYYGRVKAMLP
TPMSERNECGLPVLNSETNCDFSKNGNGNHDNFGSCKTLPAEDTDSNSISQGFGSLENTL
FCSEKMSQDKQALCQSPLTLSDYSLVSNKDTSCKRSPGSLSSKLSKMKTDHKEVGQLGEP
FQTDSNRKDDHSFDCESSNNDFLYNVCQTYKSSVEKMRECKSSISKEAVCSQSDGVIAES
VKSPISSSSLSSIEGEYTVSSVLSLPAKNDCTNIICKDKSMLGESSEQNMKDTEVPHVTF
QRNLEFSADNTRTDNPRNELCSVWLQDFDALSGKTVYINKATGLSTYGTPPSEGFQTACI
QDITTMAVNVVSENDAEGESLQSLLLEWDNPVFVPCPEIAVDVTSGQADSLAVKIHNILY
PYRFTKDMVRSMQVLQQVDNKFIACLINTRNGVEKKADGNLLILVDQHAAHERIRLEQLI
ADSYEKEAAACGNKKILSSSISPPLEIEVTEEQRRFLRCCYKNLEDLGLELSFPETNNSL
ILVRKVPMCFIEREANELRRKRQPITKSIVEELIEEQVELLQTTRRGARGTLPLTFLKVL
ASQACHGAIKFNEHLTLEESCRLIEALSSCKLPFQCAHGRPSMLPLADIDHLQQEKQPKP
NLTRLRKMARAWQLFGKKKEPI
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacgtttggtggaagatgtgcgagccaggttgcgttctgaagtcactgtcaac
tcgctcggacactgtgttgaggagcttgtcctcaatagcatcgatgccaaagcaacatgt
gtagctatcagggtggatttggaagcttttaagatccaggtggtggacaatggctctggg
atggggaaggaggacctaaaagctgttggaaagcgctacttcaccagcaagtgcagctca
gtgagagacttggagaacctgactttctatggcttcagaggagaggctttggcaagtata
gccaacatggccagtgtagtggaaatttcatctaagaccagcaggacagcaaaaacgttt
atgaagctgtttcacaatggacaggcactggaagtatgtgaagctgaattggacagacca
agtggcggaactacggtgaccgtgtgcaatctgttccatcagttaccagtgaggagaaag
tgtatggatcctgtgctggaaattgagagagtgagacagaaggttgaggctgtttcgcta
atgcatccttctgtttccctttctttaagaaatgatgtttcttgttctatggtacttcag
ctccctaagacaagagatgtatactctcggttttgtcaaatttatggactgggcagatct
cagaagctgcgagaaataaatcacaaatctgggggatttgagataagtggttttatcagt
accgagggacattacaataagaatatgcagttcttgtatgtgaataggaggcttgtttta
aagacaagactacataaactaattgattttttattaagaaaagaaagtgtaatttgcaag
gcaaagagtgtccctgcaaaccgacaggctagttcaagtcctggtcaccatcgctctggg
ccagagttgtatgggatctttattctcaatgtaacctgtgcatacagtgactatgatgtg
tgcctggaacctgcaaagactctgattgaattccagaactgggatgttcttctaacttgc
atagaggaaggagtgaaaatatttttgaagcgagagcatttatttattgaaccttgtagt
gaggacatcagagaatttaatgaacgtaatgacttttgtttgcataatgctccagttctg
aagccttcaattcttgatgagaagagcatccaagaaagttttaagaaagcatgtaatgaa
attgtggattcttatgaaatatatagcttgcaatcaaaagatgtcaagaggaaatccatt
actgggaaaaaaagttcaaatctgacagagtcaagtaaaaatatacaggaaactaaaaat
gccccagttcagaacactgctgaatcatctgatccatgtaaaaacaataaagcagagatt
ccattgccaagcaaagatgacacaatttctgatttaattaaatcaaatacatccgaacag
gagccaaaatacactaagagttcccaaaaagtatctgatactcatctgaaaccttcagaa
catctttgttcctctttcagtggagggcccagatcagaaataagagaaatagatggttgt
ggtgacctaggggattgtgcagagaatagtataaaagatgtgggcagccagcaaggtcaa
gtaacacaggaaagcagtaaggttcttgtcttaaataaggatgttattcaatcactgctt
gagagagaagaccccactgaaacagcagtggcacctgaaactgtctctggaagttcatta
atgagactgtgtaatgcaagaagaaacagggggatagctgaagtgatagatgatgccaga
agaggggctgttagttcaatgccattaaagttgtgccttacagacctcataaaaagtgtt
attcaaaatgagtccccacatgactgtgaacaaacagaaacaaatcctgcattaaacaca
ccgtgtaggcctggccctgtcagtgccaaggatatttttgaccacaaagtgaatgttgtg
attcagtcttcaaatgctaagggtatttccagtaatactaataaagaatatacagcttct
cttaccagacaggtgggcatgactgatggtaatgagaacaaacctttgtcacatcggcgg
agggaggagatagctgtgcctactgctgcccataaaagaccttatgaaatgttgaacaat
acggaattgccgctggcatcttcttcaggtattcctcgcaagaaaattgttatcaaaacc
acaagaaaacagatagctgtgccaagatcacagccctctaagaaactgagcttgtccaca
cagctgggatcattagaaaagttcaggaggtattatgggagagttaaggctatgctacca
acacccatgtcagagcgaaatgaatgtggtctcccagttcttaattcagaaactaactgt
gatttttcaaagaatgggaatggcaatcatgataactttggcagttgtaaaactctacct
gcagaagatacagattctaatagtattagccaaggttttggttccttagaaaatacttta
ttttgcagtgaaaaaatgtcacaggacaaacaggccctttgtcagagtcctttgacattg
tctgattactctctggttagtaacaaagatacaagttgtaaaagatctccaggatcatta
tcatccaaactgtccaaaatgaaaactgatcacaaagaagtaggacaacttggtgaaccg
ttccaaacagactcaaatagaaaagatgaccattcttttgattgtgaatcctcaaataat
gattttttgtataatgtttgtcaaacatataaatcctcagtggaaaaaatgagggagtgt
aagtccagcatttctaaggaggctgtgtgctcgcagtcagatggtgtgatagcagagtct
gtgaagagtcctatcagctcatcatctctcagcagtatagaaggagagtacacagtctct
tcagttttatcattacctgctaaaaatgattgtactaacatcatctgtaaagataaaagt
atgttaggtgaatcctcagaacaaaatatgaaagatactgaggttccacatgtgaccttt
caaaggaacttggagttctctgctgacaacacaagaacagacaatcccaggaatgagttg
tgttctgtctggctgcaagattttgatgctttgtcgggtaagactgtatacatcaataaa
gcaacgggactcagcacctatggcactcctcctagtgaaggatttcaaactgcctgcatt
caagatattacaacaatggctgtgaatgttgtttcagagaatgatgctgaaggggagtct
ctccagtcattgcttttggaatgggataatcctgtttttgttccctgcccagagattgca
gttgatgtgaccagtggtcaggctgacagtttggctgtgaaaattcacaatatcttgtat
ccttatcgtttcaccaaagacatggttcgttcgatgcaggttcttcagcaagtggacaat
aaatttattgcttgtttaattaacactaggaatggagtggaaaaaaaggcagatggaaac
ctcttgattttggtggaccaacatgcagctcatgaacggatccgcttggagcagctgatt
gcagattcctatgagaaggaagctgcagcatgtggaaataagaaaatactgtcttcctcc
atctctccccctttggagattgaagttactgaagagcaaagaagatttctacgatgctgc
tacaaaaatttggaggacttgggtcttgaattgtcatttcctgagacaaacaactccttg
attcttgtgaggaaagtgccaatgtgttttatagaaagagaagccaatgaattacgacgg
aaaagacaacctatcactaaaagtattgtggaggagcttattgaagaacaagttgagcta
ttgcagaccacaagaagaggagcacgagggacactgcctctgacatttctgaaggtgtta
gcttcccaggcctgtcatggagctattaagtttaatgagcatttgactttggaggagagc
tgcaggcttattgaagctttgtcatcttgcaagctacccttccagtgtgctcatggaaga
ccttcaatgctgcctcttgcagacatagaccatctacagcaggaaaaacagcctaaacca
aatttgactagactgaggaagatggcacgagcatggcagctatttggaaaaaaaaaagaa
cctatttaa
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