Lonchura striata domestica (Bengalese finch): 110477280
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Entry
110477280 CDS
T05897
Symbol
MLH3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110477280 (MLH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsr03400
]
110477280 (MLH3)
DNA repair and recombination proteins [BR:
lsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
110477280 (MLH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
MutL_C
DNA_mis_repair
HATPase_c
Motif
Other DBs
NCBI-GeneID:
110477280
NCBI-ProteinID:
XP_031360832
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Position
5:22910408..22930637
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AA seq
1402 aa
AA seq
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MIKRLVEDVRARLRSEVTVNSLGHCVEELVLNSIDAKATCVAIRVDLEAFKIQVVDNGSG
MGKEDLKAVGKRYFTSKCSSVRDLENLTFYGFRGEALASIANMASVVEISSKTSRTAKTF
MKLFHNGQALEVCEAELDRPSGGTTVTVCNLFHQLPVRRKCMDPVLEIERVRQKVEAVSL
MHPSVSLSLRNDVSCSMVLQLPKTRDVYSRFCQIYGLGRSQKLREINHKSGGFEISGFIS
TEGHYNKNMQFLYVNRRLVLKTRLHKLIDFLLRKESVICKAKSVPANRQASSSPGHHRSG
PELYGIFILNVTCAYSDYDVCLEPAKTLIEFQNWDVLLTCIEEGVKIFLKREHLFIEPCS
EDIREFNERNDFCLHNAPVLKPSILDEKSIQESFKKACNEIVDSYEIYSLQSKDVKRKSI
TGKKSSNLTESSKNIQETKNAPVQNTAESSDPCKNNKAEIPLPSKDDTISDLIKSNTSEQ
EPKYTKSSQKVSDTHLKPSEHLCSSFSGGPRSEIREIDGCGDLGDCAENSIKDVGSQQGQ
VTQESSKVLVLNKDVIQSLLEREDPTETAVAPETVSGSSLMRLCNARRNRGIAEVIDDAR
RGAVSSMPLKLCLTDLIKSVIQNESPHDCEQTETNPALNTPCRPGPVSAKDIFDHKVNVV
IQSSNAKGISSNTNKEYTASLTRQVGMTDGNENKPLSHRRREEIAVPTAAHKRPYEMLNN
TELPLASSSGIPRKKIVIKTTRKQIAVPRSQPSKKLSLSTQLGSLEKFRRYYGRVKAMLP
TPMSERNECGLPVLNSETNCDFSKNGNGNHDNFGSCKTLPAEDTDSNSISQGFGSLENTL
FCSEKMSQDKQALCQSPLTLSDYSLVSNKDTSCKRSPGSLSSKLSKMKTDHKEVGQLGEP
FQTDSNRKDDHSFDCESSNNDFLYNVCQTYKSSVEKMRECKSSISKEAVCSQSDGVIAES
VKSPISSSSLSSIEGEYTVSSVLSLPAKNDCTNIICKDKSMLGESSEQNMKDTEVPHVTF
QRNLEFSADNTRTDNPRNELCSVWLQDFDALSGKTVYINKATGLSTYGTPPSEGFQTACI
QDITTMAVNVVSENDAEGESLQSLLLEWDNPVFVPCPEIAVDVTSGQADSLAVKIHNILY
PYRFTKDMVRSMQVLQQVDNKFIACLINTRNGVEKKADGNLLILVDQHAAHERIRLEQLI
ADSYEKEAAACGNKKILSSSISPPLEIEVTEEQRRFLRCCYKNLEDLGLELSFPETNNSL
ILVRKVPMCFIEREANELRRKRQPITKSIVEELIEEQVELLQTTRRGARGTLPLTFLKVL
ASQACHGAIKFNEHLTLEESCRLIEALSSCKLPFQCAHGRPSMLPLADIDHLQQEKQPKP
NLTRLRKMARAWQLFGKKKEPI
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacgtttggtggaagatgtgcgagccaggttgcgttctgaagtcactgtcaac
tcgctcggacactgtgttgaggagcttgtcctcaatagcatcgatgccaaagcaacatgt
gtagctatcagggtggatttggaagcttttaagatccaggtggtggacaatggctctggg
atggggaaggaggacctaaaagctgttggaaagcgctacttcaccagcaagtgcagctca
gtgagagacttggagaacctgactttctatggcttcagaggagaggctttggcaagtata
gccaacatggccagtgtagtggaaatttcatctaagaccagcaggacagcaaaaacgttt
atgaagctgtttcacaatggacaggcactggaagtatgtgaagctgaattggacagacca
agtggcggaactacggtgaccgtgtgcaatctgttccatcagttaccagtgaggagaaag
tgtatggatcctgtgctggaaattgagagagtgagacagaaggttgaggctgtttcgcta
atgcatccttctgtttccctttctttaagaaatgatgtttcttgttctatggtacttcag
ctccctaagacaagagatgtatactctcggttttgtcaaatttatggactgggcagatct
cagaagctgcgagaaataaatcacaaatctgggggatttgagataagtggttttatcagt
accgagggacattacaataagaatatgcagttcttgtatgtgaataggaggcttgtttta
aagacaagactacataaactaattgattttttattaagaaaagaaagtgtaatttgcaag
gcaaagagtgtccctgcaaaccgacaggctagttcaagtcctggtcaccatcgctctggg
ccagagttgtatgggatctttattctcaatgtaacctgtgcatacagtgactatgatgtg
tgcctggaacctgcaaagactctgattgaattccagaactgggatgttcttctaacttgc
atagaggaaggagtgaaaatatttttgaagcgagagcatttatttattgaaccttgtagt
gaggacatcagagaatttaatgaacgtaatgacttttgtttgcataatgctccagttctg
aagccttcaattcttgatgagaagagcatccaagaaagttttaagaaagcatgtaatgaa
attgtggattcttatgaaatatatagcttgcaatcaaaagatgtcaagaggaaatccatt
actgggaaaaaaagttcaaatctgacagagtcaagtaaaaatatacaggaaactaaaaat
gccccagttcagaacactgctgaatcatctgatccatgtaaaaacaataaagcagagatt
ccattgccaagcaaagatgacacaatttctgatttaattaaatcaaatacatccgaacag
gagccaaaatacactaagagttcccaaaaagtatctgatactcatctgaaaccttcagaa
catctttgttcctctttcagtggagggcccagatcagaaataagagaaatagatggttgt
ggtgacctaggggattgtgcagagaatagtataaaagatgtgggcagccagcaaggtcaa
gtaacacaggaaagcagtaaggttcttgtcttaaataaggatgttattcaatcactgctt
gagagagaagaccccactgaaacagcagtggcacctgaaactgtctctggaagttcatta
atgagactgtgtaatgcaagaagaaacagggggatagctgaagtgatagatgatgccaga
agaggggctgttagttcaatgccattaaagttgtgccttacagacctcataaaaagtgtt
attcaaaatgagtccccacatgactgtgaacaaacagaaacaaatcctgcattaaacaca
ccgtgtaggcctggccctgtcagtgccaaggatatttttgaccacaaagtgaatgttgtg
attcagtcttcaaatgctaagggtatttccagtaatactaataaagaatatacagcttct
cttaccagacaggtgggcatgactgatggtaatgagaacaaacctttgtcacatcggcgg
agggaggagatagctgtgcctactgctgcccataaaagaccttatgaaatgttgaacaat
acggaattgccgctggcatcttcttcaggtattcctcgcaagaaaattgttatcaaaacc
acaagaaaacagatagctgtgccaagatcacagccctctaagaaactgagcttgtccaca
cagctgggatcattagaaaagttcaggaggtattatgggagagttaaggctatgctacca
acacccatgtcagagcgaaatgaatgtggtctcccagttcttaattcagaaactaactgt
gatttttcaaagaatgggaatggcaatcatgataactttggcagttgtaaaactctacct
gcagaagatacagattctaatagtattagccaaggttttggttccttagaaaatacttta
ttttgcagtgaaaaaatgtcacaggacaaacaggccctttgtcagagtcctttgacattg
tctgattactctctggttagtaacaaagatacaagttgtaaaagatctccaggatcatta
tcatccaaactgtccaaaatgaaaactgatcacaaagaagtaggacaacttggtgaaccg
ttccaaacagactcaaatagaaaagatgaccattcttttgattgtgaatcctcaaataat
gattttttgtataatgtttgtcaaacatataaatcctcagtggaaaaaatgagggagtgt
aagtccagcatttctaaggaggctgtgtgctcgcagtcagatggtgtgatagcagagtct
gtgaagagtcctatcagctcatcatctctcagcagtatagaaggagagtacacagtctct
tcagttttatcattacctgctaaaaatgattgtactaacatcatctgtaaagataaaagt
atgttaggtgaatcctcagaacaaaatatgaaagatactgaggttccacatgtgaccttt
caaaggaacttggagttctctgctgacaacacaagaacagacaatcccaggaatgagttg
tgttctgtctggctgcaagattttgatgctttgtcgggtaagactgtatacatcaataaa
gcaacgggactcagcacctatggcactcctcctagtgaaggatttcaaactgcctgcatt
caagatattacaacaatggctgtgaatgttgtttcagagaatgatgctgaaggggagtct
ctccagtcattgcttttggaatgggataatcctgtttttgttccctgcccagagattgca
gttgatgtgaccagtggtcaggctgacagtttggctgtgaaaattcacaatatcttgtat
ccttatcgtttcaccaaagacatggttcgttcgatgcaggttcttcagcaagtggacaat
aaatttattgcttgtttaattaacactaggaatggagtggaaaaaaaggcagatggaaac
ctcttgattttggtggaccaacatgcagctcatgaacggatccgcttggagcagctgatt
gcagattcctatgagaaggaagctgcagcatgtggaaataagaaaatactgtcttcctcc
atctctccccctttggagattgaagttactgaagagcaaagaagatttctacgatgctgc
tacaaaaatttggaggacttgggtcttgaattgtcatttcctgagacaaacaactccttg
attcttgtgaggaaagtgccaatgtgttttatagaaagagaagccaatgaattacgacgg
aaaagacaacctatcactaaaagtattgtggaggagcttattgaagaacaagttgagcta
ttgcagaccacaagaagaggagcacgagggacactgcctctgacatttctgaaggtgtta
gcttcccaggcctgtcatggagctattaagtttaatgagcatttgactttggaggagagc
tgcaggcttattgaagctttgtcatcttgcaagctacccttccagtgtgctcatggaaga
ccttcaatgctgcctcttgcagacatagaccatctacagcaggaaaaacagcctaaacca
aatttgactagactgaggaagatggcacgagcatggcagctatttggaaaaaaaaaagaa
cctatttaa
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