Lonchura striata (white-rumped munia): 110477317
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Entry
110477317 CDS
T05897
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110477317 (ZEB1)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
110477317 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-met
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2HE
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
110477317
NCBI-ProteinID:
XP_021398658
UniProt:
A0A218V6K2
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All DBs
Position
2:complement(15021396..15142052)
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AA seq
1116 aa
AA seq
DB search
MADGPRCKRRKQPNPRRNNVTNYNNVVEANSDSDDEDKLHIVEEESVTDAADCDASVPED
DLPTDHIVLPENSEREGSTNSCWEDEAGKERKEILGPEAQTDEIGCTVKEDECDSDAENE
QNHDPNVEEFLKQEDTAVIYPEAPEEDQRQGTPEASGQDENGTPDAFSQLLTCPYCDRGY
KRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLDRHMTSHKSGRDPRHVTQSSGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLMPVN
GRARSGLKMSQCSSPSLSASPGSPARPQIRQKIENKPLQEQLPLNQIKTEPVDYEFKPIV
VASGINCSTPLQNGVFSGGSPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVA
VDGNVIRQVLENNHANLASKEQETINNASIQQAGHSLISAISLPLVDQDGTTKIIINYSL
EQPSQLQVVPQNLKKENSVPANSCKNEKLPQDLTVKSEKDKNFEGETNDSTCLLCDDCPG
DLNALQELKHYETKSPPQLPQPSGAEAEKPKSPVPSETGENNLSPGQPPLKNLLSLLKAY
YALNTQPSAEELSKIADSVNLPLDVVRKWFEKMQAGQISVQSSGPSSPEQVKLSSPTDND
DQAATSTVSEPQNSTNNSQNPVSTTKSQTLPGASTLNGSHSSTPSASPLNLSSSRNSQGY
TYTAEGVQEEPQIEPLDLSLPKQHGELLERSTITSVYQNSVYSVQEEPLNLTCAKKEPQK
DNSVTDSDPIVNVIPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIP
QVAYTYSTTVSPAVHETPPKQTQANGNQDERQDTSSEGIPNLEDQNDSDSTPPKKKMRKT
ENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICTKAFKHKHHLIEHMRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKRETEERDSAEPEELGPEVAGGERAAASASPSH
IDSQIDSDERESLTREEEEYSEKEEEEDEEKDIEGLQEEKECRELQEVGDAEEEAAVEEE
EGKNEGDKNDEAVNQASSEETEVIQNNGQVSEENNE
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcaggaagcagccgaacccgcgccgcaacaacgtc
accaattataacaatgtggtagaagcaaactcggactcagatgatgaagataaattgcat
atagtggaagaggaaagtgtaacggatgcagcagattgtgatgctagcgtgccagaagat
gacttgccaacggaccatatagtattaccagaaaacagtgaaagagaagggagtacaaac
agttgttgggaagatgaagctggaaaagaaagaaaggaaatcctggggcctgaagctcag
acagatgaaattggatgtacagtaaaagaagatgaatgtgattctgatgcagaaaatgag
caaaaccatgaccctaatgttgaagaattccttaaacaagaagatacagctgttatctac
cctgaagcacctgaagaggaccagagacaaggcacgccagaagctagtggtcaggatgaa
aatggaacacctgatgcgttttcccaactgctcacctgcccgtactgtgaccggggctac
aagcgtttcacctctctgaaggaacacattaaataccgccatgagaagaacgaagataac
ttcagctgctccttgtgcagttacacgttcgcgtacagaacgcagctcgaccgccacatg
acatctcacaaatcaggaagagacccaagacatgtgacgcagtctagtgggaatcgaaaa
ttcaagtgcactgaatgtggaaaagcttttaaatataaacatcacctaaaggagcaccta
cgaatccacagtggagagaagccatatgagtgcccaaactgcaagaaacgtttttcccat
tctggttcatacagttcacacataagcagtaagaagtgtattggtttgatgcccgtgaat
ggtcgagcccggtcagggctcaagatgtctcagtgctcctccccttccctttctgcatca
ccaggtagcccagcaagaccacagatacgacaaaaaatagaaaataaacccttgcaagag
cagcttcctcttaaccaaattaaaactgaacctgtggattacgaattcaagcccatagtg
gttgcttcaggaattaattgttcaacccctttgcaaaatggggtttttagtggtggtagc
ccgttgcaggcaaccagttctcctcagggtgtggtgcaagctgttgttctaccaacagta
ggtctggtgtctcccataagcatcaatttaagtgacattcaaaatgtactaaaagtggca
gtggatggtaatgtaataaggcaagtactggaaaacaatcatgctaatcttgcgtccaaa
gaacaagaaacaatcaacaatgcatctatacaacaagctggccattccctcatttcagct
atcagtcttcctttggttgaccaagatgggacaaccaaaattattatcaactacagcttg
gagcaaccaagtcaacttcaggttgttccacaaaatctaaaaaaagaaaactctgttcct
gcaaatagttgcaaaaatgagaaattaccacaagatctcacggtgaagtctgagaaagat
aagaactttgaaggagagaccaacgatagcacttgtcttctttgtgatgactgtccagga
gatcttaatgcacttcaagaattaaagcactatgaaacaaaaagccctcctcagcttccc
cagcccagtggagcagaagctgagaaacccaagtcccctgtcccatcagaaactggggag
aacaacttgtctcctggtcagccacctttaaagaaccttctgtcgctcctaaaagcatat
tatgcattaaatacacaaccaagcgcagaagagctttcaaaaatagcagattctgtaaac
ctaccactggacgtggtaagaaagtggtttgaaaaaatgcaagctggacaaatttctgtg
cagtcttctggaccatcttctcctgaacaagttaaattaagcagtcccacagacaacgat
gatcaagcagcaacttcaactgtgagtgaaccccagaacagcacaaataactcacaaaat
cctgtcagtacaacgaaatctcagactttaccaggggcttcaactctcaatggttcccac
agtagcacgccatctgcatcaccactaaacctttcttcatcaagaaattcacagggttac
acgtacacggcagagggtgtacaagaagagccacaaatagaacctcttgacctttcgcta
ccaaagcaacatggagaactgttggaaagatctaccattactagtgtttaccagaacagt
gtttattctgtccaagaagaacctttgaacttaacttgtgcaaaaaaagaaccacaaaag
gacaacagtgttacagactctgatcctattgtaaatgtaatcccaccaagtgccaatccc
ataaatattgctatacctacagtcactgcccagttacctacaattgttgccattgctgac
cagaacagtgttccctgcttgagagctctcgctgccaataagcaaaccattttgattcca
caggtggcttatacatactctactacagttagtcctgcagttcatgagacaccaccaaaa
cagacccaagccaatggaaatcaggatgaaaggcaagacactagctcagaaggaataccc
aatttagaagatcaaaatgattctgattcaacacccccaaagaaaaaaatgagaaagaca
gaaaatgggatgtatgcatgtgatttatgtgacaaaatattccagaagagcagctcatta
ttgagacataagtatgaacacacaggtaaaagacctcacgagtgcgggatctgtacaaaa
gcattcaaacacaaacaccatttgattgaacacatgcgactgcactctggggaaaagccc
taccaatgtgacaagtgtggaaagaggttttcacactcggggtcttactctcagcacatg
aaccaccgctactcctactgcaaaagagagacggaggagcgtgacagcgccgagcccgag
gagctgggccccgaggtggcgggcggcgagcgcgcggccgccagcgcgtccccctcgcac
atcgactcgcagatcgactcggacgagagggagagcctcaccagggaagaggaggaatac
agtgaaaaagaggaagaggaggatgaagaaaaagacatagagggacttcaggaagaaaaa
gaatgtagggaactacaagaagtaggggatgcagaagaagaagcggcagtagaagaggaa
gaagggaaaaatgaaggtgacaagaacgatgaagctgtaaatcaagcaagcagtgaagaa
acagaagttatacaaaataatgggcaggtgtcagaagaaaataatgaataa
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integrated database retrieval system
