Lonchura striata (white-rumped munia): 110477411
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Entry
110477411 CDS
T05897
Name
(RefSeq) mitochondrial ubiquitin ligase activator of nfkb 1-A
KO
K15688
E3 ubiquitin-protein ligase MUL1 [EC:
2.3.2.27
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110477411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110477411
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110477411
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110477411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDE
zf-C3HC4_3
Prok-RING_4
zf-RING_2
zf-RING_5
N1221
DUF202
Motif
Other DBs
NCBI-GeneID:
110477411
NCBI-ProteinID:
XP_031361484
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All DBs
Position
9:8867418..8870078
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AA seq
393 aa
AA seq
DB search
MRQSAALGTGTQGHRCLQNRVSGMSLSWVTQPHFPDNTLTLQALLPKPGTMDKPITPGEL
LCLGSSLAFSGLFYYLYRRKARVVARIQEAPKLQVDDNLPAVVSAAEGRCLPYVALEGIV
LPAQAALTSHYHEGLQGVIQKLLLKEHRLIWNSLARSWSESERVLSEQIYTVPFLLASPG
PEAATQVSVDSPLQAVCLPLEMVYERFQQPSHGFRDLLGQYLIGEKPKGILETEEMLRVG
AGLTGIGELALHPDGSLHLQPPAQGGEFFLCLGDWQTVRSELESASGLWKAAALLCAAAG
LAVLLHALCRAYRRSRPRQRQQDKEPDEEPDEEAAGDRAPEDSCVVCLSQPRECVLLGCG
HICCCFRCFQALPTRLCPICRGPIDRVVPLYQV
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgagacaaagcgccgccttggggacagggacccagggacaccgctgcctgcagaacagg
gtcagtgggatgtccctgtcgtgggtgacacagccccatttcccagacaacacgctcacc
ttgcaggcattgttgcccaagcctggcaccatggacaaacccatcactccgggggagctg
ctgtgtctgggctccagcctcgccttctctggcctcttctactacctgtacaggaggaaa
gccagagtcgtggcacgcatacaggaggcccccaagctccaggtcgatgacaatttgcca
gccgtggtgtctgcagctgaggggcggtgcctgccttacgttgccctggaaggcatagtg
ctgccagcccaggctgcactgaccagccactaccatgaggggctgcagggcgtgatccag
aaactgctgctgaaggagcatcgactgatctggaacagcttggcccgaagctggagcgag
agcgagcgggtgctctcagagcagatctacaccgtccccttcctgctggcctcgccaggc
cctgaggcagccacacaggtgagtgtggacagcccactgcaagccgtgtgcctgcccctg
gagatggtgtacgagcgcttccagcagccatcccacggcttccgcgacctgctgggccag
tacctgatcggagagaagcccaagggcatcctggagaccgaggagatgctgagggtaggg
gctgggctgacgggcatcggggagctggccctgcaccccgacggttccctgcacctccag
ccgccggcccagggaggcgagtttttcctgtgcctgggggactggcagacggtgcggtca
gagctggagtcggccagcgggctctggaaggcggcagcgctgctgtgcgcggcagcgggg
ctggccgtgctgctgcacgccctgtgccgcgcctaccgccgctcccgccccaggcagcgg
cagcaggacaaggagccggacgaggagccggacgaggaggcggccggcgaccgggcgccc
gaagactcgtgcgtggtctgcctgtcacagccccgcgagtgcgtcctcctgggctgcggc
cacatctgctgctgcttccgctgcttccaagccttgcccacccgcctctgccccatctgc
cgggggcccattgaccgcgtggtgcccctctaccaggtctga
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