Lonchura striata (white-rumped munia): 110477441
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Entry
110477441 CDS
T05897
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110477441 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsr03400
]
110477441 (RAD54B)
DNA repair and recombination proteins [BR:
lsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
110477441 (RAD54B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_34
ZGRF1-like_N
Motif
Other DBs
NCBI-GeneID:
110477441
NCBI-ProteinID:
XP_021398887
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All DBs
Position
2:complement(128130232..128192477)
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AA seq
918 aa
AA seq
DB search
MRRSAAPSQVLGNAGKKPRFIPPGKCTAVCLKNETKEMDQEIKSKEIDEKEGDASLLSKI
SIQNQNENFTRSMESTGKIKPKACFSIDKCSKAEKKTLTVPKADALYLPTSGTAKEEAAQ
EAPDCLVKYFSVMWCKASKKKHKKWEGDAILITKGKSVILKDMEGKDIGRGTGYKAKELD
SLAEGQTLMVGGKEIEVMGVISADDFSSGRCFQAGIGTHETDATALSQTNTKPFCKPFKN
VCQPSPKENTLRDSQSCKPRHDPNATNALVMPRPNASHQWMFNKAGLPVVDVVVDPYIAN
NLRPHQKEGIIFLYECVMGMRVSGRFGAILADEMGLGKTLQCIALVWTLLRQGPYGCKPV
LKRALVVTPGSLVKNWKKEFQKWLGSERIKVFAVDQDHKVEEFISSPLYSVMIISYEMLL
RSSDQIEAVDFNLLICDEGHRLKNSTIKTTTALTSLSCERRILLTGTPIQNDLQEFYALI
EFVNPGILGSLSTYRKIYEEPIVRSREPSATEEEKELGEKRAAELTRLTGLFILRRTQEV
INKFLPPKKESIIFCRPTALQLELYRKLLGSRVITSCLQGRLENSPHLICIGALKKLCNH
PCLLFKAIKEKSSDPMSEEYESSLYEGVIDVFPQDYTSDTFCETDSGKLQVLVKLLAAIH
ELNSSERVVLVSNYTQTLNVLQDVCKHYGYSYTRLDGHTPVSQRQHIVDTFNSKFSPAFI
FLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQKHAVHIYRLLTTGSIE
EKIYQRQISKQDLSGAVVDLSKTSEHTHFSIEELKNLFTLHEDSSCVTHDLLECDCMGKV
DHQNTSSKKPPISRSCQLEQNHGKPNSKKPLSMSQLMQWKHFSGQHQPLADPFLERIKEN
VSFIFQNVTSPTSPPNKT
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgatctgcagctcccagtcaagtcctaggaaatgctggcaaaaagccaaggttt
ataccaccaggaaaatgtactgctgtttgtctcaagaatgaaactaaggagatggaccaa
gaaattaagtcgaaggagatagatgagaaagagggagatgcttcattgctatctaaaata
agtatccagaatcaaaatgaaaattttacacggtctatggagtcaactggaaaaataaag
ccaaaagcatgtttcagcattgacaagtgtagcaaggcagaaaagaaaacactaactgtg
cccaaagctgatgcactgtatttgccaacatcagggactgcaaaggaagaagcagctcag
gaggcacctgactgccttgtgaaatatttcagtgtcatgtggtgtaaggcatcaaagaaa
aagcacaagaagtgggaaggcgatgctattcttattacaaaaggaaagtcagtaatattg
aaagatatggaaggcaaagacattggcagaggtactggatataaagctaaagagctagac
agccttgctgaaggtcaaacactgatggttggcggaaaagaaattgaagtgatgggtgta
atttcagcagatgatttcagcagtggcaggtgttttcaggctggaatagggactcatgaa
acagatgcaactgcattatctcaaactaatacaaaaccattctgtaaaccattcaaaaat
gtctgtcaacctagtcctaaagagaatacactcagagattctcaaagctgcaaacctcgc
catgatccaaatgctacaaatgctctggttatgccccgaccaaatgcaagtcatcagtgg
atgttcaataaggctggtttacctgtggtggacgtagttgtagatccttacattgcaaat
aatctccgcccacatcagaaagaaggaattatatttctatatgaatgtgtaatgggaatg
agagtcagtggcaggtttggagctattctggctgatgagatgggcttaggaaaaaccctg
cagtgcattgcacttgtctggactcttctgcgtcaagggccctatggatgcaaacctgta
ctaaagcgagcgctggtagtcacccctgggagcctggtgaaaaactggaaaaaagaattt
cagaaatggctcggaagtgaaaggatcaaagtctttgcagttgatcaggaccacaaagta
gaagaattcatcagttctccactttattctgtaatgataatcagttacgagatgctgttg
cgatcttcggatcaaattgaggctgtagactttaacctcctaatctgtgatgaaggacat
cgtctgaaaaatagcactattaagacaactacagccctcacgagtctgtcttgtgagagg
agaattctcctcactggtactccaatccaaaatgacttgcaagaattttatgcattaata
gagtttgtgaatccaggaatacttggttctttatccacgtatagaaagatatatgaggaa
ccaattgtcagatctagagaaccttcagcaacagaggaggaaaaggaattaggagaaaaa
agagcagcagaactcactcgcctcactggactctttattctaagaagaacacaggaggtt
ataaacaaatttctgccccccaaaaaggagagcataatcttctgccgaccaacagcgctg
caacttgaattgtatcgcaaactgcttggttctcgtgttattacatcgtgtctgcaaggc
aggctggaaaatagtccccacctaatatgtataggggctctgaaaaaactttgcaatcat
ccatgccttctgtttaaagctataaaggaaaaaagttctgatcctatgtctgaggaatat
gagtccagcctctatgaaggtgtaatagatgtcttcccacaagattatacttcagacact
ttctgtgaaactgattcaggaaaattgcaggtgctggtgaagttgttggcagcaatccat
gagctcaactcttctgaaagagtcgtgttggtatcaaattacactcagacgttaaatgta
ttacaagatgtatgcaaacattatggatactcctatactagacttgatggacatactcct
gtctcccagagacaacatattgtggatactttcaatagtaaattcagcccagcttttatc
tttttgctgagttcaaaggctggtggagtgggactgaacctggttggagcatctcatttg
atcctgtatgatattgactggaatccagctacagatattcaggcaatggctagagtgtgg
agagatggtcagaaacatgctgtccatatctacaggctactaaccacaggttcaatagaa
gaaaagatttaccaaagacagatcagcaaacaagacctttctggggcagttgtagacctt
tccaagacatctgaacacacacatttttctattgaggagcttaaaaatctctttactcta
catgaagattccagctgtgttactcatgacttgcttgagtgtgactgtatgggaaaggtt
gaccatcaaaatacttcctcaaaaaagcctcccatatctagaagctgccagcttgaacaa
aaccatgggaagcctaattcaaagaaaccactttccatgtcacagttgatgcaatggaag
catttctctgggcaacatcagcctcttgctgatcctttccttgaaaggataaaagaaaat
gtttctttcattttccagaatgtaaccagtcctacttccccacctaataaaacttga
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