Lonchura striata (white-rumped munia): 110477474
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Entry
110477474 CDS
T05897
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110477474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsr03009
]
110477474
03016 Transfer RNA biogenesis [BR:
lsr03016
]
110477474
03029 Mitochondrial biogenesis [BR:
lsr03029
]
110477474
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
110477474
Ribosome biogenesis [BR:
lsr03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
110477474
Transfer RNA biogenesis [BR:
lsr03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
110477474
Mitochondrial biogenesis [BR:
lsr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
110477474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_N
CDC37_C
Motif
Other DBs
NCBI-GeneID:
110477474
NCBI-ProteinID:
XP_031359601
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All DBs
Position
2:129690950..129700704
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AA seq
600 aa
AA seq
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MAGAGAEAALSAGAAPLRSLPLAPAGARPAHHRPRGPLGNVVLQGCAVGVRMRSAGAWVS
TCVGGGRAASERRVGAGAELRGCTARRPLPASSRYRGSATPPEMSGAREKKRAKKMRNQP
ASVTLPAEPGPFAGGGSRACPTPGDVRSEQQQQKFSNQSSGPSYRKDQNFSKGQNRGERG
RGRGGWQGGHPSVSEEMPKYITVSTFAQARAAEISAMLKAVSQKSSNSLVFQTLPRHMRR
RAMSHNVKRLPRRLQEMARKEAEKAVHQKKEQSKTKCRKARRRHINLVAEFNHRQRKNIW
LETHIWHAKRFHMVKKWGYCLGNSPTEKSYRACYRAMTKQCLLQDLSYYCCLELKGKENE
LLKQLARICSIDTGLTFQEASCLSGRFEGSLNLYRADRYPEDMLGPVTFIWKPRDGSENR
QLWIWVHPALKQDILRELKAIFQCSEPEEICISEPVTTSIQEEEQVEVMSLGNKRKKEDK
EGEKAVPVKKIIGDGTRDPFQSYSWISQTTGITISDRSMEILRYRLIGPLSHSVLTETLK
AAPVQTEMADSETGLNNWWVENCKDSEKVSLHQCQSAVFELLEGICACGCYWWKGGKLKI
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggctggagccggcgctgaagctgcactaagtgctggggccgcccccctgcgctccctc
cccttggcgccagccggggcacggcccgcccaccaccgcccgcgggggcctctgggaaat
gtagtccttcagggctgtgctgtaggagtgcgcatgcgcagtgccggggcgtgggtgtcc
acgtgtgtcggtggaggccgcgccgcgagtgagcgccgcgtcggggctggtgccgagctc
cgcggctgcaccgcccgccgaccgctgcccgcctcttcccgctacagaggctccgcaacc
ccgccggagatgtctggggcgcgggagaagaagcgagccaagaagatgaggaaccaaccg
gccagcgtcacgctgcccgcggagccggggcccttcgccggcggcgggagcagagcctgc
ccgaccccaggagatgttcgttctgagcagcagcagcagaaattttcaaatcagtcatct
ggaccttcttacaggaaagaccaaaatttttcaaaggggcaaaatagaggagagagaggc
agaggaagaggaggatggcaaggaggacacccaagtgtttctgaggaaatgccaaaatac
ataacagtgtctacctttgcccaagctcgtgctgctgagatcagtgccatgttgaaagca
gtttcacagaagtcttccaactctctggttttccagaccctccctaggcacatgcggagg
cgagcaatgagtcacaatgtgaaacgcctacccaggcggctccaagagatggccaggaaa
gaggcagagaaagctgtacatcagaaaaaggaacagtcaaagactaaatgccgcaaagct
agaagacgccacataaatttggtagcagagtttaatcacaggcaaagaaagaatatttgg
ctggaaacccatatttggcatgcaaagagatttcatatggtaaagaaatggggatactgt
ttaggaaacagccctacagagaagagctacagggcttgttaccgagccatgacaaagcaa
tgccttcttcaggacttatcatattattgttgcttggagttgaagggtaaagagaatgag
cttctgaagcaacttgctcgaatatgtagcattgacacaggattgacatttcaagaggct
tcttgcctgtctggaagatttgagggttccctgaatctttatcgagcagatcgctatcct
gaggatatgcttggtcctgttacatttatttggaaacccagggatgggtctgaaaacaga
cagttgtggatctgggtgcatccagctctcaagcaggacatactgagggagttaaaagca
atttttcagtgttcagaacctgaagaaatctgtatttctgagcctgttacaacatcaatt
caagaggaagaacaagtggaagttatgagccttggcaataaaagaaagaaggaggataaa
gaaggagaaaaggctgtgccagtgaaaaaaataattggtgacggcactagagatccattc
cagtcctactcttggatctcacagactactggcattacaatcagtgacagaagcatggag
attctcagataccggctgattggcccattatcacactctgtccttacagagaccctgaag
gcagctcctgtccaaacagagatggcagattcagaaacaggactgaataactggtgggta
gaaaactgcaaggactctgaaaaagtctctctccatcaatgtcaaagtgctgtctttgag
ctattggaaggtatttgtgcttgtgggtgctattggtggaagggggggaaacttaaaatc
tag
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