Lonchura striata (white-rumped munia): 110477603
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Entry
110477603 CDS
T05897
Symbol
RAPGEF1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04510
Focal adhesion
lsr04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110477603 (RAPGEF1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
110477603 (RAPGEF1)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
110477603
NCBI-ProteinID:
XP_021399197
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Position
17:complement(7040003..7124777)
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AA seq
1236 aa
AA seq
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MSGKIEKADSERSHLSSFTMKLKGKFHSPKIKRTPSKKGKQADLTVKTPEKSVNKNVSWL
EEKEKEVVSALRYFKTIVDKMAIDNKVLEMLPGSASKVLEAILPLVQTDPRIQQSSAISS
CYSRVYQSLANLIRWSDQVMLEGVNSEDKEMVTTVKDVIKAVLDGVKELVRLTIEKQEHP
SPTSPVKPSLPACKSDSPSELPLTDREMEILNKTTNMTQSNELLTDSMDEEVAPPKPPLP
SIRVAENSPPPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQVTKYLLKPQDF
DVDCYAQRRLSGGSHSYGGESPRLSPCSSIGKLSKSDEQLSSLDRDSGQCSRNTSCETLD
QSDHYDPDYEFLQQDLSNADQIPPQGPGVLSPLPESLGESGSPFHGHTFQLPQGSSPPLE
FCSLSGAAQPTETPPALPEKKRRSAASQTSESSGCRVSYERHPSQYDNISEDDLQSAVLV
PSVPFTPFAAVLPFQQGNSSAPVEFMADFAAPDSNSDPEKPPPLPEKKNKHMMAYMQFVE
DYSEPQPSMFYQTPQNEHIYQKKNKYLREVYGINDSFISLDSSQDLAPPPALPPKQRQLQ
ASYAASSFSSVSYCVQQPKVPFTPEDCGATQGLTMSVSNSFLSRHSSFPVHSYKSVFRSY
SQDFVPHNQVSIPPFLSSTSTSCSTPPFPPVHLSQSPDLAVPAAASQSPSTVDVPNSSSQ
ESSFNGNAPVCLPSETSFTDSLQTPSSENASEEAGEGEYVNLYSSGQSNGELPGSEGESP
PVKDGHSKDSALNSSAMGKEGKDGAERQPQSPDALESSQLEEEVDELSLIDHSEIMSRLT
LKQEGDDGPDVRGGSGDILLVHATETDRKDLVLYCEAFLTTYRTFITPEELIKKLQYRYE
KFCHFPDTFKKRVSKNTFFVLVRVVDELCLVELTEEILKLLMDLVFRLVCSGELSLARVL
RKNILDKVDQKKMLSYANSIKPLAARGVAARPGTLHDFHSHEIAEQLTLLDAELFYKIEI
PEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIMLQEKAQDRERLLLKFIKIMKHLR
KLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLAEYCTLIDSSSSFRAYRAALADVEPPC
IPYLGLILQDLTFVHLGNPDYIDSKVNFSKRWQQFNILDSMRCFQQVHYDIKRNDDIVSF
FNDFSDHLAEEALWELSLKIKPRNITRRKTDREEKT
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcaagatcgagaaagcagattctgagcgttcccatctctcctcgttcacaatg
aagttgaagggcaagtttcattcacccaaaataaagagaacaccctcaaagaaaggaaag
caagctgacctgacagtgaaaacaccagagaagtcagtgaacaaaaatgtatcgtggcta
gaggaaaaggagaaggaagttgtcagtgccttgcgctactttaagactattgtggacaaa
atggcaattgataacaaagtgttggagatgctgccaggctcagcaagtaaagtgctggaa
gccatcctgcccttggtgcaaactgacccacgcatccagcaaagttctgccatctcatcc
tgctacagccgagtgtaccagagcctggccaacctcatccgctggtctgaccaggtgatg
ctggagggggtgaattcagaggacaaggagatggtgacaacagtcaaggatgtcataaaa
gctgttctggatggagtcaaggagctggtcagactcacgattgaaaagcaggagcatccc
tctcccacaagcccagttaaacccagtttaccagcatgtaaatctgacagcccatcagag
cttcccctcacagaccgagaaatggagatcctcaacaaaacaactaacatgactcaatcc
aacgagctgctgactgactccatggatgaagaagttgcacctcctaaaccccctctgccc
agcattcgtgtggcagagaacagccctccaccagcattgccccctaaaaaacgtcagtct
gcaccttccccaaccagagtggctgttgtggcccccatgagccgagctaccagtgggtcc
agtttacctgttgggatcaacagacaggtaaccaagtatttgctgaagccccaggatttt
gatgttgactgctatgcccagaggaggttgtcaggtggaagccactcctacgggggagag
tctcctcgcctctctccatgcagcagcattggcaaactgagcaagtctgacgagcagctc
tcctctctggaccgcgacagcggccagtgctcccgcaacacaagctgtgaaaccctggat
caatcggatcactatgatccagactacgaattcctgcagcaggacctctccaacgctgat
cagatacctcctcaggggccaggcgtcctcagcccattgccagagtccttgggtgagtct
ggctcccctttccatggacacactttccagctgccgcagggcagctctcctccactggaa
ttctgcagcctctcgggagcagcgcagccgacagagactcccccagctctgcccgagaag
aagaggaggagtgcagcctcgcagacttcggagagctcgggctgcagggtgtcctacgag
cggcacccgtcccagtacgacaacatctccgaggacgacctgcagagcgccgtgctcgtc
ccgtcagtgcccttcacccccttcgctgctgtgctgcctttccagcaaggaaactcttca
gcaccagtggaattcatggctgattttgctgctccagattccaacagtgacccagaaaag
ccgccacctctgccagagaagaaaaacaagcacatgatggcctacatgcagtttgtggaa
gactactcagagccgcagccgtccatgttctaccagacccctcagaacgagcacatctac
cagaagaagaacaagtacctcagggaagtctacgggatcaatgactcctttatcagctta
gactcctctcaagatctggcacctcctcctgctctcccacccaagcagcggcagctgcag
gcctcctatgctgcctcttctttctcttctgtctcctactgtgtccagcagcctaaagtg
cccttcacccccgaggactgcggtgccactcagggcctcactatgtcagtgtctaactcc
tttctgagccggcacagctcctttcctgtgcactcgtacaaatctgtgtttaggtcctac
tcccaggactttgtgcctcacaaccaagtctccatacctcctttcctctcttctacctcc
acctcctgctccaccccgcctttcccacccgtccatctgtcccagagccccgacctagcg
gtgcccgctgcagccagccagtcacccagcactgtggatgtgccaaactcctcttctcag
gagagcagctttaacgggaatgctcctgtctgccttccttctgaaacctctttcactgat
tctctccagacgccttcgagtgaaaacgccagtgaggaggctggtgagggtgaatatgtc
aatctgtattcctctggccagagcaacggggaactcccaggctctgaaggagaatctccc
cctgtcaaagatggccactccaaagactcggctttgaacagcagtgccatggggaaggag
ggcaaagatggtgctgaaaggcagccacagtcaccagatgctttggagtcatcacagctg
gaggaagaggtagatgagctgtcccttattgaccacagtgaaatcatgtctagattaaca
ctgaagcaagagggggatgatgggccagatgtccgtggtggatctggggacattctgctg
gtgcacgccacggagaccgacaggaaagatctggtgctgtactgtgaagcctttctgact
acatacaggacatttattacccctgaagagctcatcaagaagctgcagtacagatatgag
aagttttgccacttcccagacacgttcaagaagcgagtcagtaagaacaccttcttcgtg
ctggtgcgagtggtggatgagctgtgcttggtggagttgacagaggagatcctcaagctg
ctgatggacctggtgttcaggctggtgtgcagtggggagctgagcctggccagagtgctg
cgcaagaacatcctggacaaagtggatcagaagaaaatgctgagctacgccaactccatc
aaacctctcgcggccagaggggtggcagccaggccagggacactgcatgatttccacagt
catgaaatagctgagcagctgaccctgctggatgctgaactcttctataaaatcgagatc
ccagaagttctgctttgggcaaaggaacaaaatgaagagaagagtcccaacctgacacag
ttcacagagcactttaataacatgtcctactgggtccgttcaataattatgctacaagag
aaagcccaggaccgagagaggctgctccttaaatttataaagattatgaagcacttacga
aagctgaataattttaattcctatctggccattctttctgcactggattctgcacccatc
cgaaggctggagtggcagaagcaaacctcagagggcctggctgagtactgcaccctgatc
gacagctcctcgtccttccgcgcctaccgagcggccctggccgacgtggagcccccctgc
atcccctacctaggcttgattctgcaggacctgacctttgtccatctgggaaaccctgat
tacattgacagcaaagtgaacttttccaagcgctggcagcagtttaacatcctggacagc
atgaggtgcttccagcaagtacattacgacatcaaaaggaacgacgacatagtgtccttc
ttcaacgacttcagcgaccacctggccgaggaggccctgtgggaactgtccctgaaaatc
aaacctcgcaacatcacgaggcggaaaacggatcgggaagagaaaacctag
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