Lonchura striata (white-rumped munia): 110477666
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Entry
110477666 CDS
T05897
Symbol
RABGAP1
Name
(RefSeq) rab GTPase-activating protein 1 isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110477666 (RABGAP1)
Membrane trafficking [BR:
lsr04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110477666 (RABGAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
ERM_helical
Motif
Other DBs
NCBI-GeneID:
110477666
NCBI-ProteinID:
XP_021399346
UniProt:
A0A218V5Q9
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All DBs
Position
17:9980522..10042902
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AA seq
1068 aa
AA seq
DB search
MDDKASVGKISVSSDSVSTLNSEDFVLVSRQGDETPSTNNGSDDEKTGLKIVGNGSEQQL
QRELEDVLMDPPMEDQSSDQDHGEVRTDGDGEEPVVLEASASSTINPVSVAGLQKPEMSL
PVKPSQGDCEDLSPFTPVSDEDSVVFSKLTYLGCASVNAPRSEVEALRMMSILRGQCQIS
LDVTLSVPNVSEGTVRLLDPQTNTEIANYPIYKILFCVRGHDGTPESDCFAFTESHYNAE
LFRIHVFRCEIQEAVSRILYSFATAFRRSAKQTPLSATATPQTPDSDIFTFSVSLEIKED
DGKGYFSAVPKDKDRQCFKLRQGIDKKIVIYVQQTTNKELAIERCFGLLLSRGKDVRSGD
MHLLDLESMGKSSDGKSYVITGSWNQKSPHFQFVNEETPKDKVLFMTTAVDLVITEVQEP
VRFILETKVRVCSPNERLFWPFSKRSSTENFFLKLKQIKQKDRKNNSDTLYEVVCLESES
ERERRKTTASPSLRLPQSGSQGSMIPSPPEDDEEEDNDEPLLSGSGDVSKECAEKILETW
GELLSKWHLNLSVRPKTLSALVRSGVPEALRGEVWQLLAGCHNNDHLVEKYRILITKESP
QDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLLH
MPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCKFYQLERLMQEYIPDLYNHFLDISLEAH
MYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVALGLLKTTKDDLLLTDFEGALK
FFRVQLPKRYRSEENAKKLMELACNMKISQKKLKKYEKEYHTMREQQAQQEDPIERFERE
NRRLQEANMRLEQENDDLAHELVTSKIALRKDLDNAEEKADALNKELLMTKQKLIDAEEE
KRRLEEESAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSERLEKQQTANKAEIEK
IRQKVDDCEHCREFFNKEGRVKVASTAKDGSDEDTDEEKETLKNQLREMELELAQTKLQL
VEAECKIQDLEHHLGLALNEVQAAKKTWFNRTISSIKTVTGVQGKETC
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaggcttctgttggaaaaatcagtgtctcttcagactcggtatccactctt
aacagtgaagattttgtcttggtttccaggcaaggggatgaaacaccatctacaaataat
ggtagtgatgatgaaaaaacaggactgaagattgtggggaatggaagtgaacagcagctg
cagcgagagctcgaagacgtgctgatggatccacccatggaggatcagtccagtgaccag
gaccatggagaagtcagaactgatggagatggggaagaacctgttgtccttgaagcgtca
gcatcctctaccattaacccagtgtcggtggcaggactccagaaaccagaaatgagcttg
ccagtgaaaccatcccaaggagactgtgaggatttgagcccgttcacgcccgtgagcgac
gaggacagcgtggtgttcagcaagctgacctacctgggctgcgcctcggtgaacgccccg
cgcagcgaggtggaggccctgcgcatgatgtccatcctgcgcggccagtgccagatctcc
ctggacgtcaccctgtcggtgcccaacgtctctgaagggaccgtgagacttttagatcct
cagacaaacacagaaatagcaaattatccaatctataaaatccttttctgtgtacgaggg
cacgatgggacccctgaaagtgattgctttgctttcactgaaagccactacaatgcagaa
ctcttcaggattcatgtcttccgatgtgaaatccaagaggctgtgagccgaatcctgtac
agctttgccactgccttccggcgctctgccaaacagaccccgctctcagccactgccacc
ccccagactccagacagtgacatcttcaccttctccgtgtctctggaaatcaaagaagat
gatgggaagggttatttcagtgcagttcccaaagacaaggacaggcaatgcttcaaactc
cgccaagggattgataagaagattgtgatttatgtgcaacagacaacgaataaagaactt
gctattgaaagatgttttggccttctccttagccgtgggaaagatgttcggagtggtgac
atgcaccttttggatttggagtccatgggtaaaagttctgatggaaaatcatacgtgatc
actgggagctggaatcaaaagtctccacacttccagtttgtaaatgaagaaacaccaaaa
gataaagtgttgttcatgaccactgctgtggatttggtcataactgaggtgcaggagccc
gttcgattcattctggagactaaagtcagagtttgctcacctaatgagaggctgttctgg
cccttcagcaaacggagctcaactgaaaattttttcttaaaattgaaacagataaagcaa
aaggacaggaagaacaactcagacactctgtatgaggttgtgtgcctggaaagtgagtca
gagagggagagaaggaaaaccacagccagcccctctctccgcctgccccagtcggggtcg
cagggctccatgatcccatctcctcccgaggatgatgaagaggaagacaatgatgaacca
ctcttaagtggttctggagatgtttccaaagagtgtgcagaaaaaattcttgaaacgtgg
ggagagctgctgtccaagtggcacctgaacctgagcgtgcggcccaagacgctgtcggcg
ctggtgcgcagcggcgtccccgaggcgctgcggggcgaggtgtggcagctgctggcaggg
tgtcacaacaacgaccacctcgtggagaagtacaggatcctcatcacaaaggagtctcca
caagacagcgccatcacccgagacatcaatcgaacattccctgctcatgattattttaaa
gatactgggggggatggccaggactccctgtacaaaatatgcaaggcctactctgtgtat
gatgaagagattggctactgccagggccagtcattcctcgctgctgtgctgctgctacat
atgcctgaggagcaagctttcagtgttctggtcaaaatcatgtttgattatggactcagg
gaacttttcaaacagaactttgaagatttgcactgcaagttctatcagctggagcgcctc
atgcaggaatacattcctgatctgtataaccactttctggacatcagccttgaagcacac
atgtatgcttctcagtggttcctgaccctgttcactgcaaaattccctctctacatggtc
ttccacattattgatttactcctatgtgagggaataagtgttatcttcaatgttgcactg
ggattgttaaaaactaccaaggacgatttgttgctgactgactttgaaggggctttaaag
ttcttccgagtgcagctgcccaagcggtaccgctccgaggagaacgccaagaagctgatg
gagctggcctgcaacatgaagattagccagaagaagctgaagaaatatgaaaaggaatat
cataccatgagagagcagcaggctcaacaggaggatcctatagaaagatttgagcgcgag
aaccggcgcctgcaggaggccaacatgagactggagcaggagaacgacgacctcgcccac
gagctggtcaccagcaagattgcactgaggaaggacttggacaatgcagaggagaaggca
gatgccctcaataaggagctgctaatgaccaaacagaagctgattgatgcagaagaagaa
aagaggcgcctggaggaagaatctgctcagctgaaggaaatgtgtcgtagggaactagat
aaggcagagtcagagatcaaaaagaacagctctattattggtgactacaaacagatttgt
tcccagctgagtgagcgactggaaaagcaacaaacagcaaataaagctgaaattgagaaa
atacggcaaaaggtggatgactgcgagcactgccgcgagttcttcaacaaggaaggccgt
gtgaaggttgccagcactgccaaggatggttcagacgaggacacggatgaggagaaggaa
acactgaagaaccagctgagggaaatggagcttgagctggcccagaccaagctgcagctt
gtggaggcggaatgtaaaatacaggatttggagcaccatttgggtctggccctgaatgaa
gtacaagctgcaaagaaaacgtggttcaacagaacaataagctctataaaaacagtgact
ggagtccaaggaaaagagacttgttga
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