Lonchura striata (white-rumped munia): 110477682
Help
Entry
110477682 CDS
T05897
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110477682 (GAPVD1)
Membrane trafficking [BR:
lsr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
110477682 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
DUF5996
Motif
Other DBs
NCBI-GeneID:
110477682
NCBI-ProteinID:
XP_021399384
LinkDB
All DBs
Position
17:10746015..10775036
Genome browser
AA seq
1488 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVSSEKQLIQRLNADVLKTAERLYRTAWISKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKL
NQDNTQGVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFSPVQQEKLFGEKGT
EKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRMKSNLAKFDKSCVAAFLDVVIDGRAVETPPMSAVNLLEGLSRTVVYMTYSQLTALVGF
MRNVMSSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPI
GQQLAAITAWDTSATNLSAHITLVTPFATRSRSRSNMLMDQHGDHEGSSQETIPEVQPEE
VLVISLGTGPQITPGMMSENEVLNMQLADGGQGDVPIDENKLHGKPDKTLRFSLCSDNLE
GISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKF
EIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPG
SGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDV
REVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQ
LTSPPSQTDSLLALFDPLSSNEGVSAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPN
FGCHALIPTDLEAFKQRHSYPERLVRSRSSDIVSSVRRPMSDPGWNRRAGNEDRELPMAS
GSAGAAVLAAASQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWRKRFVSAMPKAPIP
FRKKEKQEKDKDDMVPDRYAMLQDDPSPRLSAQAQAAEDILDKYRNAIKRTSPSEGAIVN
YDSAEAIGDGESMHDSPRDEALQNMSADDLPDSASQVAQPQGSAFSYRDAKKKLRLALCS
ADSVALPMLTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSR
FDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFT
TVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQL
QDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLR
EAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFIPVLVFVL
IKANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctggacatccacacgctggcccaccacctgaagcaggagcggctgtacgtc
agctcggagaagcagctgatccagcggctcaacgccgacgtgctgaagacggcggagcgg
ctgtaccgcacggcctggatctccaagcagcagcgcatcaacctcgacaggctcatcatc
accagtgctgaagcttctcctgctgaatgttgccagcacgcaaaaatcttggaggacacc
cagtttgtggacgggtacaagcagttgggattccaggagactgcttacggagaattcctg
aacagactgagggagaaccccaggcttattgcgtcctgcctggttgccggagagaagctc
aaccaggacaacacccagggtgtcattcacaccgtcttcacctccatctatggcaactgc
atcatgcaggaggacgagagttacctgctgcaggtgctccgctacctgatcgagtttgaa
ctgaaggaaagcgacaaccccaggcggctgctgaggcgaggcacctgtgccttcagcatc
ttgttcaagcttttctctgaaggactcttttctgcaaaactttttcttactgctacctta
catgaaccaatcatgcagcttctggttgaagatgaagaccacctggaaaccgatgcaaac
aagttgattgagagattctccccagtacagcaggaaaagttatttggagagaaaggcacg
gaaaagttcaagcagagagtccaagagatggttgactccaacgaggccaagctggtgact
ctggtcaacaaattcattggctatctcaaacaaaacacgtactgctttcctcacagcctg
aggtggattgtgtcgcagatgtacaaaacgctgtcgtgtgtggacaggctggaggtgggc
gaggtcagggccatgtgcacagatctccttctggcctgtttcatctgccctgccatcgtc
aaccccgagcagtacggcatcatttctgatgctcccatcaacgaggtggcaaggtttaat
ctgatgcaggttgggagacttctgcagcagctggcaatgacaggctctgaggagggagat
ccacgtatgaagagcaacctggctaaatttgacaaaagctgtgttgctgctttcctggac
gtggtgatcgacgggcgcgcggtcgagactcccccgatgtcggccgtgaacctgctggag
gggctgagccgcaccgtggtgtacatgacctacagccagctcactgccctggttggcttc
atgcggaacgtgatgtcaagcgatcaacttaaggaagatcggatggctttggaaaacttg
ctggcaaatttaccccagaacaaaccagggaaaagcagcagccttgaaatgactccatat
aacaccccccagctttctcctgcaactactccagctaacaaaaagaaccgactgcccata
ggacagcagttggcagcgattactgcctgggatacctctgctaccaatctgtcagctcac
ataactctagtaaccccttttgccactcgaagcagaagtagatcaaacatgctaatggac
cagcacggagatcatgaaggatcctcccaggagactattccagaagttcagccagaagaa
gtgctggtgatttctctggggacaggtccacagattactccaggaatgatgtcagaaaat
gaggtgttaaatatgcagcttgcagatggtgggcaaggagatgttcccatcgacgagaac
aaactccatggcaaacctgataaaaccttgcgcttttccctctgcagtgataatctggaa
ggaatatctgaaggcccttccaatcgctccaactccgtgtcctccctggatctggagggg
gagtcggtgtcggagctgggcgcgggcccctccggcagcaacggcgttgaggctctgcag
ctgctggagcacgagcaagccacaactcaggataacctggatgacaagctccggaagttt
gaaatccgtgacatgatgggtttgactgatgacagagacatttcagaaactgtgagtgaa
acctggagcacagatgtcttgggaagcgacttcgaccccaacatcgacgaggaccgactg
caggaaattgcaggtgcagctgcagagaacatgctaggcagcttgctgtgtttgccaggt
tcaggatccgtgttgcttgatccctgcacaggttcaaccatatcagaaaccacaagtgag
gcgtggagtgtggaagtattaccaagtgattcagaagctccagatttaaaacaggaggaa
agactccaggagctggagagctgctctgggctgggtagcacgtctgatgacacagatgtg
agggaggtcagctctcggcccagcacgcccggcctgagcgttgtgtcaggtattagtgca
acatctgaagatattcctaacaagattgaggatctcaggtctgaatgtagctctgacttt
gggggaaaagattctgtaacaagtcctgacatggatgaaacagcccatggagccagtcag
ttaacatctcctccttctcagacagattctttgcttgcattgtttgaccctctgtcctca
aatgagggtgtatcagctgtagtgaggcctaaagtgcactatgcaagaccctctcatcca
cctccagatccacccatcctggaaggagccgtgggaggcaacgaggcccggctgccaaac
ttcgggtgccacgctttgatcccgacggacctggaagccttcaagcagagacattcctac
ccggagaggctggtccgcagcaggagctccgacatcgtgtcctcggtgcggaggcccatg
agcgatcctggctggaacagacgtgctggcaatgaggacagggagctgcccatggcctcc
ggcagcgccggggcagcggtgctggcggccgcctctcagtcgtcatcttcatctcccagc
aaggactcctccaggggagagattgaggaacggaaggacagtgatgatgagaagtctgac
aggaacaagccctggtggaggaaacgctttgtgtctgccatgcccaaagctcctattcca
tttaggaagaaagaaaaacaagaaaaagacaaagatgacatggtgcctgacagatatgca
atgcttcaagatgatcccagcccaaggctcagtgcacaggcacaagctgctgaggacatt
ctggacaaatacaggaatgcaatcaagagaacgagtcccagtgaaggagccatcgtcaac
tacgacagtgcagaggcaattggggatggtgagagcatgcacgactccccacgggatgag
gctttgcagaacatgtctgcagatgacctcccagactctgcaagtcaagtagcacagcca
caaggttctgctttctcctatagggatgcaaagaagaaattgagattggctctttgttca
gcagattctgttgccctcccgatgctgacccattcaacaaggaatggtctcccagaccac
acagaccctgaagataatgaaatcgtgtgcttcttgaaagttcagctggctgaagccatc
aacctgcaggacaagaacctgatggcgcagctgcaggagacgatgcgctgcgtcagccgc
ttcgacaaccgcacctgccgcaagctgctggcctccatcgcggaggactacaggaaaaga
gctccatatattgcttatttaacgcgctgtcgccaaggcctgcagacgacacaggcgcac
ctggagaggctcttgcagagagtcctgcgagataaagaagtggccaacagatacttcacc
acagtctgtgtgaggttactgctggagagcaaggaaaagaaaataagggagttcattcaa
gatttccagaaactgacggcagcagatgataagacggcgcaagtggaggattttctgcag
ttcctgtatggggccatggctcaggatgccatctggcagaatgccagcgaggagcagctc
caggatgcacaattagccatcgagcgcagtgtgatgaatcgcattttcaaactggccttc
taccccaatcaggatggagacattctgcgtgaccaggtccttcacgagcacatacagagg
ttgtccaaagtagtgactgcaaaccacaaggcacttcagatacctgaggtgtatctccgg
gaggcgccctggccgtcggcgcagtccgagatccgcaccatcagcgcttacaaaaccccc
cgggataaggtgcagtgtatcctgaggatgtgctccaccatcatgaacctgctcagtctg
gccaacgaggattccgtacctggggcagatgattttattcctgttctggtctttgttctc
ataaaggcaaaccccccttgcctgctgtccactgtgcagtacatcagcagtttctatgcc
aactgcttgtctggagaggagtcctactggtggatgcagttcacggcagccgtggagttc
atcaaaaccatcgatgatcgcaagtag
DBGET
integrated database retrieval system
