Lonchura striata (white-rumped munia): 110477805
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Entry
110477805 CDS
T05897
Symbol
HDX
Name
(RefSeq) highly divergent homeobox
KO
K24884
highly divergent homeobox
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110477805 (HDX)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
110477805 (HDX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Motif
Other DBs
NCBI-GeneID:
110477805
NCBI-ProteinID:
XP_021399577
UniProt:
A0A218UD98
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All DBs
Position
4A:4475246..4508414
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AA seq
695 aa
AA seq
DB search
MNVRSVFTVEQQRILQRYYENGMTNQSKNCFQLILQCAQETKLDFSVVRTWVGNKRRKMS
SKIAVESGGTPPATAPATPSMPPEAAVKNVVNIARSQSQQSSWTSSNNDVIVTGIYSPAR
SSGWPGASKHTNASVAELHKTSIPRLPGKSDADFQQQHIPLGRQVPHCKNASLLVGEKTI
ILSRQTSVLNSANSIYSHTKKSYGSSSVQTAELVLPQKPMIFHRPCRAEPLACQRLHKPE
PAALASHVPPGPRAHPRDPACGTQNLEIREVFSLAVTDQPQRLVAGSAPQKQPSPEGSCL
SIAMETGDVEDEYAREEELASMGAQIHSYSRYCEGSGSGRGDNQSAAAPGRSGGCGAQPG
GARDVPDNLLYHSREFHLPARTSLHTTSSTIYNPANAARSTFSPHFTSSSQLRLSQNQNN
YQISGNLTVPWITGCSRKRALQDRTQFSDRDLATLKKYWDNGMTSLGSVCREKIEAVAAE
LNVDCEIVRTWIGNRRRKYRLMGIEVPPPRGGPADFSDQSEFVSKSALNPGEETATEVGD
DNDRNDEVSICLSEGSSQEETNEALQNEEIGHKDDDQNPVSTDNVKIEILDDEESDLISN
SEVDQMSSLLDYKNEEVRFIESQLESHKQKYFELQMFTRSLILAIKSDDKEQQQALLSDL
PPELEEMDFNHTSPELDDTSFSLSSLSEKNASDSL
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgcgttctgtatttactgtagagcaacaaaggatattacagcgttactatgaa
aatggaatgacaaatcaaagtaaaaattgctttcagctcatattacagtgtgcacaagaa
actaaactggatttcagcgtggtcaggacgtgggttggcaacaagcggcggaagatgagc
agcaagatcgccgtggaatctgggggcacccccccagcgactgcccctgccactccctcc
atgcccccagaagcagcggtgaaaaatgtggtaaatattgctcgatcccaaagccagcaa
tcctcttggacctcttctaacaacgacgtgatagtgaccggtatctacagcccggccaga
tcctcgggctggccgggagcctccaagcacacgaacgcctccgtggcagagctgcacaaa
acctccatcccccggctcccgggcaagagcgacgcagacttccagcagcagcacatccct
ctgggacggcaggtaccccactgtaaaaacgcttccctcttggtgggggaaaagaccatt
attctatccaggcaaacgagcgtgctcaattctgcaaactccatctacagtcacacgaag
aaaagctacggcagctcctcggtgcagacggcggagctggtgttacctcagaaacccatg
attttccacaggccctgcagggccgagcccttggcgtgccagcgcttgcacaaacccgag
cccgcggccctggcgtcgcacgtgccccccgggccgagggctcaccccagggaccccgcg
tgtggcacgcagaacctggagatccgcgaggtgttctcgctggccgtcacggaccagccg
cagcggctggtggcgggcagcgcgccgcagaagcagccctcgccggagggcagctgcctg
tccatcgcgatggagaccggcgacgtggaggacgagtacgcccgcgaggaggagctggcc
tccatgggagcgcagatccacagctactccagatactgtgagggcagcggctccggccgc
ggggacaaccaaagcgcggccgcgccgggccgcagcgggggctgtggggcacagccgggc
ggtgccagggatgtgcctgacaatctcctctaccacagcagagagttccacctgcctgca
cggacctcattgcacacaacatccagcacgatttataaccctgccaatgcagccagaagt
accttttctcctcattttacatcttcaagtcaactgaggctgtcacaaaaccaaaataat
taccagatttcaggaaaccttactgtgccttggattacaggttgttccagaaaaagagca
ttacaggaccgcacacaatttagtgaccgagacttagctaccctaaagaaatactgggac
aatggcatgaccagcctgggctcagtctgcagagagaaaattgaagctgtggctgcagaa
ttaaatgttgactgtgaaatagttcggacttggattgggaatcgaagacggaaatatcgt
ttaatggggattgaggtcccaccccctagaggaggtcctgctgatttctctgatcaatct
gaatttgtttctaaatcagcacttaatccaggagaggaaactgctactgaagtgggggat
gataatgataggaatgatgaagtatcaatctgcttatctgaaggaagctcacaagaagag
acaaatgaagctcttcaaaatgaagaaattggccacaaagacgatgaccagaatccagtt
tccactgataatgtgaaaatagaaattttggatgatgaggagagtgatctgatcagcaat
tctgaagtggatcagatgagttctcttttggattacaagaatgaagaagtcaggttcatc
gagagccagctggagagccacaaacagaaatattttgaactgcagatgtttacccggagt
ttgatacttgcaattaaatcagatgataaggaacagcagcaggctctgctttcagactta
cctcctgaacttgaagagatggatttcaaccacacctccccggagctcgacgatacctca
ttcagcctctcgtcgctgtcggagaagaacgcctcagacagtttgtga
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