Lonchura striata (white-rumped munia): 110477868
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Entry
110477868 CDS
T05897
Symbol
RNF169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110477868 (RNF169)
03400 DNA repair and recombination proteins [BR:
lsr03400
]
110477868 (RNF169)
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
110477868 (RNF169)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
110477868 (RNF169)
DNA repair and recombination proteins [BR:
lsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
110477868 (RNF169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_4
Prok-RING_4
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
110477868
NCBI-ProteinID:
XP_021399704
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All DBs
Position
1:complement(95492254..95510574)
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AA seq
653 aa
AA seq
DB search
MAAAGAGGRAAVRGRRRRGRSAAEEEQDAVVLSVAECPVCRQALVEAVTPPCRHSLCLAC
FQRCLQGPGLCCPLCRSRLSTRARRQQAELAATTAAGAAGGERRLPDQDFIFRAPIKLSK
AGELREEYESQLRKLREEKLQEEKTSEDLVHKFILDDMDVGKRKMEEQLKKDESVVLKGN
QDCFPERLSDSENEEPFQGKQTHRSAFVSKTSAYSFAFLSGNLTSKVKRSQSCNDTIQER
SKSRQRSAPASKTKVLPGEGASTPLLGVLSCAQNNRCLSAPDLTADKRLLLSAVSSLSAL
HRPERSISPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLNRSLQK
PTTYEASPRILKKWEQIFQERQIKKTLSKATLTSLASEHEEDVVPDITNSSSCTKEQPQA
QVDHLPPDTTGEPCPELDFFPSVSEMKLGRGSEKNRGSQALTTDDGAAELDVRSSVTSLN
TRVAEVPDIKVNAFVDKSCLCLGPKALSRRLMGISASLPDNSTLAVPIKPPGKKHLKYLN
NSELINVENSTCNSVENIIGEQPPLLRRGRKRRCKTKHLEHNGSVKRLRHVAGEVGLPPE
VRDVEQKLQQEEEDKRLALHLQRIFDSENRTVDRRKIRLDRYLLRSKSTLGAK
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgggtgccggcggccgggccgcggtgcgggggcggcggcggcggggccgg
tccgcggccgaggaggagcaggacgcggtggtgctgtcggtggccgagtgcccggtgtgc
cggcaggcgctggtggaggcggtgacaccgccctgccgccactctctctgcctcgcctgc
ttccagcgctgcctgcagggcccgggcctctgctgcccgctgtgccgcagccgcctctct
acacgggcccggcggcagcaggccgagctcgcagccaccacggccgccggagcagcaggc
ggggagcggcggctgccggaccaagactttatattcagagcacccattaaattaagcaaa
gcaggagaactccgagaagagtatgaaagccagctaaggaagctgagagaagagaaacta
caagaagaaaagacatctgaggatcttgttcacaagttcatcctagatgacatggatgta
gggaaaagaaaaatggaggaacagctgaaaaaagatgaatctgtagtgctgaaagggaat
caagactgttttcctgaacgtctctcggattccgagaatgaagaaccattccagggcaag
caaacacatcggtcagcttttgtttccaagaccagtgcttactcctttgctttcctttca
gggaatttaacctccaaggtgaagaggagtcagagctgcaatgacaccattcaggagaga
tccaaaagcaggcagagatcagccccagccagcaaaacaaaggtgctgcccggagagggc
gcatcaacaccgctgctcggggtgctgtcgtgcgcacagaacaaccgctgcctgtctgcc
ccggacctgacggccgacaagcgcctgctcctcagcgccgtgtcctccctgtcagccctg
cacaggccagagcgctccatcagccccgagagcaacgacagcatctcagaagagctcaac
catttcaagccgatcgtctgctccccatgcaccccgccaaagaggcttcccgacggcaga
gtactgagcccgctcatcatcaaatccacccccagaaacctgaaccggagcctgcagaag
ccaaccacctacgaggccagtcctagaatactgaaaaaatgggagcagatatttcaggag
cgtcagatcaaaaagactctctctaaagcaacccttacatccttggcttcggagcatgag
gaagacgtggttcctgacatcaccaactccagcagttgcactaaagagcagccacaagcg
caggtggatcaccttccacctgacacaacaggagagccttgccctgagctggatttcttc
ccgtcagtcagtgaaatgaagctgggaagggggagtgagaagaacaggggttcacaggcc
ttaaccactgatgacggtgctgctgaactagatgtgagatcaagtgtaacctccctaaac
acacgagtggctgaagtccctgacataaaagtgaatgcatttgtggacaaatcctgtctt
tgtctgggcccgaaagcgctgagcaggagactcatgggcatcagcgcatcgctgcctgac
aacagcacacttgcagtccccatcaagccaccggggaaaaagcatctgaaatacctgaac
aacagtgagctgatcaatgtagagaacagcacctgcaactctgtggagaacatcatcggg
gaacagccgccgctactgcggcggggccggaagagacgctgcaaaacaaagcacttggag
cacaatggctctgtcaaaagactgaggcacgtggcaggggaggtgggcctgcctccggag
gttcgggatgtggagcagaagctccagcaagaggaggaggacaagaggttggccctgcac
ctgcagcggattttcgacagtgagaacaggactgtggataggcggaaaatccgtctggat
cggtatctcctgcggtccaagagcactctgggtgccaagtag
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