Lonchura striata (white-rumped munia): 110477882
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Entry
110477882 CDS
T05897
Symbol
HDGFL2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2 isoform X1
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsr03400
]
110477882 (HDGFL2)
DNA repair and recombination proteins [BR:
lsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
110477882 (HDGFL2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
110477882
NCBI-ProteinID:
XP_021399722
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Position
28:complement(4206295..4216172)
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AA seq
642 aa
AA seq
DB search
MPHSFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP
YEKYKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPAPASSSDSDVPENDPMAGSDAGDDE
DDSAMATVPTEKVDSEEDSDRGSDHSGLKRKSLAMKMPVTKRPRKSSSDLDQGSPSVTEE
ENSETSSESEKNSDQDFTPEKKPVARAPRRMPAAGRKKKKVESGSDSDSKVDSDLEMGNA
TVDMTKSDSDSDSDVSVKKAPRGRKPAEKPPPKPRGRKPKPERVPSSSSSDSDSDSDVDR
ISEWKRRDEERRRELEEKRKREQEEEIRRLREQEKEEKEKRKEKAEKSEEVHSDSDSSAE
DEMAKKGRRGRAKAPSSSDSELEQEKEVKKPAKKQPSELSRKPNQKEKRGRAEEKPRNKP
LKVERGRKKSDPIPERRMEKKKEPTVEEKLQKLHSEIKFALKVDNPDIKRCLSALEELGT
LQVTSHILQKHTDVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVLGPKMESIQKANKAG
PEKDKGEAEKGQEKLSGAETRNEKGEEETNADLSGPVNGESLSQKSEGTEEKEKSQGPGA
GELEASTEEPHNNSVQDYPKAGLERARGESEAADEEEEEEES
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgccacacagcttcaaacccggggacctcgtcttcgccaagatgaagggctacccgcac
tggccggcccggatcgatgacatcgcggacggcgccgtgaaaccccccccgaacaagtac
cccatcttcttcttcggcacccacgagaccgccttcttgggccctaaagatctcttccct
tacgaaaaatataaagacaaatatgggaaaccaaacaagagaaaaggcttcaacgagggc
ttgtgggaaatccagaacaacccccacgccagttacagtgcccctgcgcccgccagctcc
tccgacagcgatgtccccgagaacgaccccatggcgggcagcgacgccggggacgacgag
gacgactctgccatggccacggtccccacggagaaggtggacagcgaggaggactctgat
cgaggcagcgaccacagtgggctcaagaggaaatccttggccatgaaaatgccagtgaca
aaacggcctcggaaatcctccagtgacttggatcagggcagcccctctgtcacagaagag
gagaactcagaaacgtcttctgagtcagaaaaaaacagtgaccaggatttcactcctgag
aagaagccagtggcccgggctccacggaggatgcctgcagcagggaggaagaagaagaaa
gtggagtctggctctgactccgactccaaagtggactcggatctggagatgggcaatgcc
accgtggacatgaccaagtcagactcggactcagactcggatgtgtcggtgaaaaaggca
ccacggggccgcaagccagctgagaaacctcctcccaagccccggggcaggaaaccgaag
cccgagcgtgtccccagcagctccagcagtgacagtgacagcgacagcgacgtggatcgc
atcagcgagtggaagaggcgggacgaggagcggcggcgggagctggaggagaagaggaag
agggagcaggaggaggagatccgtcggctccgggagcaggagaaggaggagaaggagaaa
aggaaggagaaggcagagaagagcgaggaggtgcactcggactcggacagcagcgccgag
gatgaaatggccaaaaagggccggaggggccgggccaaggctccgtcctcctcggactct
gagctggagcaggagaaggaggtaaagaagccggcgaagaaacagccctcggagttgtca
aggaaaccaaatcagaaggagaagagaggccgagcagaggagaagccacggaacaaacct
ctgaaagtggaacgaggccggaagaaatccgacccgatccccgaaaggaggatggagaag
aaaaaggagcccacagtggaagagaaactccagaaacttcacagtgagatcaagtttgcg
ctgaaggtggataacccggacatcaagcggtgtctgagcgcactggaggagctgggcacg
ctccaggtcacttcccacatcctccagaagcacacggacgtggtggccacgctcaagaag
atccggcgctacaaagccaacaaggacgtgatggaaaaagcggccgaagtctacacccgg
ttgaagtcgcgtgtgctgggaccaaagatggaatccatccagaaagccaacaaagctggg
cctgagaaggacaagggggaggcagagaagggccaggagaagctgtcgggagcggagaca
cggaatgagaagggggaagaggagacaaatgctgacctgtcaggtcctgtgaatggtgaa
tccctgtcccaaaagtcagagggcacagaggagaaggagaagagccaagggccaggagct
ggggagctggaggcatccacagaggagccccacaacaacagtgtccaggactatcccaag
gccgggctggagcgagctcgcggggagtcggaggctgcggatgaggaggaggaggaggaa
gagagctga
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