Lonchura striata (white-rumped munia): 110478036
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Entry
110478036 CDS
T05897
Name
(RefSeq) transducin-like enhancer protein 1 isoform X1
KO
K04497
groucho
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04310
Wnt signaling pathway
lsr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
110478036
04330 Notch signaling pathway
110478036
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsr04812
]
110478036
Cytoskeleton proteins [BR:
lsr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
110478036
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TLE_N
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
EIF3I
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
DSE1_N
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_NOL10_N
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_Aladin
ASA1
Beta-prop_CAF1B_HIR1
CFAP251_N
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_WDR41
Beta-prop_ACSF4
Beta-prop_IP5PC_F
Beta-prop_NUP159_NUP214
WD40_RFWD3
HALZ
DUF6100
TP_0598_N
Motif
Other DBs
NCBI-GeneID:
110478036
NCBI-ProteinID:
XP_021400021
LinkDB
All DBs
Position
Z:48383813..48459882
Genome browser
AA seq
782 aa
AA seq
DB search
MFPQSRHPTPHQAAGQPFKFTIPESLDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRH
YVMYYEMSYGLNIEMHKQTEIAKRLNTICAQVIPFLSQEHQQQVAQAVERAKQVTMAELN
AIIGVRGLPGLPPTQQQLQAQHLSHGHGPPVPLTPHPSGLQPPGIPPLGSSAGLLALSSA
LGGQSHLAIKDDKKHHDADHHRDREPGTSNSLLVPDSLRSTDKRRNGPDYANDIKKRKVD
DKDSSHYDSDGDKSDDNLVVDVSNEDPSSPRASPTHSPRENGIDKARLLKKDASSSPAST
ASSGSSTSLKSKEMGLHEKASTPVLKSSTPTPRGDVPTPGTSATPGLRPGLGKPPTMDPL
VNQAAAGLRTPLAVPGPYPAPFGMVPHAGMNGELTSPGAAYASLHNMSPQMSAAAAAAAV
VAYGRSPMVGFDPPPHMRVPGIPPNLAGIPGGKPAYSFHVTADGQMQPVPFPPDALIGPG
IPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISQPGNKSPVSQLDCLNRD
NYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCF
SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ
LQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCG
KWFVSTGKDNLLNAWRTPYGASIFQVRMMLLLMKKNKNNQKTMQSSRSGFRYLHISHLPK
MR
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgttcccccagagccggcaccccaccccgcaccaggctgcgggccagccttttaaattc
accatcccggagtcgctggaccgcatcaaagaagagttccagttcctccaggcgcagtac
cacagccttaaattggaatgtgagaaactggcaagtgaaaagacggaaatgcagaggcat
tatgtgatgtactatgaaatgtcgtatggattaaacattgaaatgcacaaacagacagaa
atcgcgaagagattgaatacaatttgtgcacaagtcatcccatttttgtctcaggaacat
cagcaacaagtggcccaagctgtagaacgtgccaaacaagtgaccatggctgaattgaat
gccatcatcggggtacgtggccttccaggtctacctcctacacagcagcagttgcaggct
cagcatctctcccatggccatggacctccagtgcctctaacaccgcatccttcaggactt
cagcctccaggaatccctccacttggaagcagtgctggccttcttgccctctccagtgct
ttgggtgggcagtctcatttggcaataaaagatgacaagaagcatcacgatgcagaccac
cacagagacagagagccaggcacaagtaattctctgttggtccctgacagtctacgaagc
acagataaacgcaggaatggccctgactatgccaatgacatcaaaaagagaaaggtcgat
gataaggattccagccactatgacagtgatggggacaagagtgacgataacttggttgta
gatgtatccaatgaggatccttcttccccaagggcaagtcccactcactcaccacgtgag
aacggtatcgataaagcccgcctactgaagaaggatgcctccagtagtccagcatctaca
gcctcttcaggaagttccacttccctcaaatcaaaggaaatgggtctgcatgaaaaagcc
agcacgcctgttctgaaatccagcacaccaactcctcgaggtgatgtgccaaccccaggc
actagtgcaactccaggactccgtccaggccttggcaaacctccaacaatggaccctctg
gttaaccaagctgctgcaggtttgcggacaccgttggcagtaccaggaccataccctgct
ccatttggaatggtacctcatgctggcatgaatggagagttaaccagtccaggggcagcc
tatgccagtctgcacaatatgtcaccccagatgagtgctgctgctgctgcagctgccgtg
gttgcctatggacgatctcctatggttgggtttgatcctcctcctcacatgagagtacct
ggaattcctccaaatctagcagggattcctgggggaaaaccagcctactcctttcatgtt
actgcagatggtcagatgcagccagttcctttccctcctgatgccctcatcggtccagga
atccctcgccatgcccgtcagatcaacaccctgaaccacggggaagttgtgtgtgcagtt
accatcagcaaccccacgagacacgtgtacacgggtgggaagggctgtgtcaaagtttgg
gacatcagccagcccggtaacaagagccctgtctcccagctggactgcctgaacagagat
aactacatccggtcctgtaaattgctgcctgatggatgcaccctcatagttggcggggaa
gccagcacattatccatatgggacctggcagctccaactcctcgtataaaagcagagctg
acatcctcagcacctgcctgctatgctctagctatcagccctgactccaaggtgtgcttt
tcctgctgcagtgatgggaacattgcagtgtgggatctgcacaatcagacactggtcagg
caattccagggccacacagatggagccagctgtattgacatttctaatgatggtaccaag
ctctggacaggaggtttggataacactgtcagatcctgggacttgagggaagggagacag
ctacaacagcatgacttcacatcacagatattttcccttggttattgtcctactggtgaa
tggctagctgtgggaatggagagcagcaatgtcgaagtattacatgtaaataagccagac
aagtatcaactgcaccttcatgagagctgtgtactgtcactcaagtttgcttactgtggt
aaatggtttgtgagtactgggaaagataaccttcttaatgcatggagaactccttatgga
gccagtatcttccaggtgaggatgatgttgcttttaatgaaaaaaaacaaaaacaaccaa
aaaaccatgcagagttccaggagtggattcagatatcttcacatatctcatctacctaaa
atgagatga
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