Lonchura striata (white-rumped munia): 110478039
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Entry
110478039 CDS
T05897
Symbol
GIGYF2
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110478039 (GIGYF2)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110478039 (GIGYF2)
Surveillance factors
Other surveillance factors
110478039 (GIGYF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
110478039
NCBI-ProteinID:
XP_021400030
LinkDB
All DBs
Position
9:25515184..25590272
Genome browser
AA seq
1311 aa
AA seq
DB search
MAAETQTLNFGPEWLRALSSGGSVTSPPLSPALPKYKLADYRYGREEMLALFLKDNKIPS
DLLDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGTVVGAPRGRS
SSRGRGRGRGESGFYQRSFDEVEGGFGRGGGREMHRSQSWEERGDRRFEKPGRKDPVRPN
FEEGGTVTTGRKHEFIRSESENWRIFREEQNGEDEDGGWRLAGSRRDGERWRPHSPDGPH
SAGWREHMERRRRFEFDFRDRDDERGYRRVRCGSGSMDDDRDSLPEWCLDDAEEEMGTFD
SSGAFHSLKKVQKEPIPEEQEMDFRPVEEGEERSDSEGSHNEEAKDHEKTKKEGEKTERI
VAETVEEAAQASSPVARSDTPPKSQPPDPLQTNLFERKEESVPERTEKTEDKENQVENTL
SAKMSNRGEDLASLAQPLPQISADTAASAHLSPPISNSNPALRPVQTPVTAAPGMGNIPT
DPDDEEGLKHLEQQAEKMVAYLQDSALDDERLAAKIQEHRAKGSSMPLFHEAMQKWYYKD
PQGEIQGPFSNQEMAEWFQAGYFTMSLLVKRACDETFQPLGDIMKMWGRVPFTPGPAPLP
HLGELDQERLTRQQELALIQMQHLQYQHLLIQQQYAQMLAQQQKAALSSQQQQQLAILLQ
QFQALKMRISEQNMMPPVTRSVSVPDTGSIWELQSASQPTVWEGSSVWDLPIDTAAQGPA
LEQLQQLEKAKAAKLEQERREVEMRAKREEEERKRQEELRRQQEELLRRQQEDERKRREE
EELARRKQEMTVRAERGEAVDLICLDFRKAFDVILHKRLVYKEEALRRQREQEIALRRQR
EEEERQQQEEALRRLEERRREEEERRQREELIRKQEEEAAKWAREEEEAQRRLEESRLRM
EEEAARQRLEEEERKRKELELQRQKEIMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSST
WGQQSNSGACQSQTTLSLAEIQKLEEERERQLREEQRRQQRELMKALQQQQQQQQQKLSG
WGNVTKPTGTTKSLLEIQQEEARQMQKQQQQQHQQPNRVRNTTHSNLHTSIGNSVWGSLN
TNPSNQWASDLVSSIWSNADTKNSNMGFWDDAVKEVGPRNSTNKNKSNASLSKSVGITSR
QNKKVEEEEKLLKLFQGVNKAQDGFTQWCEQMLHALNTANNLDVPTFVSFLKEVESPYEV
HDYIRAYLGDTPEAKEFAKQFLERRAKQKASQQRQQQQQQDSVWGMNHSSLHSVFQTNQS
NNQQSNFEAVQSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLEDY
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaaactcagacacttaactttgggcctgaatggctgcgagctttgtctagt
ggcgggagtgtgacatcccctcctctgtctccggctttgccgaagtacaaactagcagac
tatcgctatgggagagaagaaatgttggcactttttctaaaggataataagataccttca
gaccttctggataaggaatttttgcctattttacaagaggagcccctgccaccactggca
cttgtaccttttacagaagaagaacagagaaatttctcgatgtctgtaaacagtgctgct
gtcctgcggttgacgggacgtggaggaggaacggtggtaggggctcctcgaggtcgaagt
tcctctagaggtcgaggcagaggccgaggagaaagcggtttctaccaaagaagttttgat
gaagtggagggtggatttgggcgaggagggggcagggaaatgcacagatcacagagttgg
gaggaaaggggagacagacgctttgaaaaaccagggcgaaaagatccagtgagaccaaac
tttgaggaaggtgggacagtgaccactgggaggaaacacgaatttatacgctccgagagc
gagaactggcgcatcttcagggaggagcagaatggggaagatgaggatggaggctggcga
ctggctgggtcacggagagatggggagaggtggcgtcctcacagtccagacggccctcat
tccgcaggctggcgggagcacatggagcgacggcggagatttgagttcgatttccgggac
cgagacgacgagcggggctatcgccgtgtgcgctgcggcagcggcagcatggacgacgac
agggacagtctccctgagtggtgcttggatgatgctgaggaagaaatgggcacgtttgac
tcctctggagcattccactctttaaagaaagtgcagaaggagccaataccagaggagcag
gagatggacttccggcctgtggaggaaggggaggaaaggtctgattctgaagggagccac
aatgaagaagccaaagatcatgaaaagaccaagaaagagggggagaaaacagaaagaatt
gtggcagaaacggtggaagaagcagctcaagcatcatctccagttgccaggtcagacacc
ccaccgaaatcccagcctccagacccgctgcagacaaacctttttgagaggaaggaagag
tctgtgccagaaagaacagaaaaaacagaagataaagagaatcaagtggagaatacactg
tcagccaaaatgtccaacagaggggaagatttggcttctcttgctcaacctttgccacag
atttctgcagacacagctgcttctgctcatctttctcctccgatttccaattcaaatcct
gctctgcggccagttcaaacacctgtcacagctgctccaggcatgggcaacattcccact
gatccagatgatgaagagggcctcaaacacctagagcagcaagcagaaaaaatggtggca
tatctgcaggacagtgcccttgatgatgaaagactagcagcaaaaatccaagagcacaga
gcaaagggttcctctatgcccctgtttcatgaagccatgcagaagtggtactacaaagat
ccacaaggagaaattcagggtccgttcagtaatcaggagatggcagagtggtttcaggct
ggatacttcacgatgtccctgttggtgaagagagcctgtgatgagactttccagccactt
ggagacatcatgaaaatgtggggcagggttcccttcactccaggcccagcaccacttccg
catctgggcgagctggaccaagagcgactgactagacaacaggagttggctctaatccaa
atgcagcaccttcagtatcagcatcttttaatacaacaacagtatgcacagatgctggcc
cagcagcagaaggcagccctctcatcccagcagcagcagcagcttgctattctccttcaa
cagttccaggccctgaagatgagaatatctgaacagaacatgatgccacctgttacaagg
tctgtgtcagtgccggacactggctcaatatgggaacttcagtcagcttcacagcctaca
gtctgggaaggaagcagtgtctgggatctgcccattgatactgcagctcagggaccagct
ctagaacaacttcagcagctcgagaaggccaaggctgcaaagctagagcaagagaggaga
gaagtggaaatgagggccaaacgagaggaagaggagaggaaaaggcaggaggagcttcgg
aggcaacaagaagagctacttaggaggcagcaggaagatgagaggaaacgacgggaagaa
gaagaactggcccgcaggaagcaagagatgacagtgagagctgagaggggtgaagcagta
gacttaatctgcctggacttcaggaaggcttttgatgtaatactgcataaaagactagta
tataaggaggaggccctcaggcgacaacgagagcaggaaattgcactaaggcggcagcgg
gaggaagaggagaggcaacaacaggaggaagcacttaggagattggaggagagaagaaga
gaggaggaggaaagacgtcagcgagaggagttaattcgtaaacaggaagaggaggctgcc
aaatgggcgcgtgaggaggaggaagctcagcggcggctggaggagagccggctgcgcatg
gaggaggaggcggcccggcagcggctggaggaggaggagcggaagcgcaaggagctggaa
ctccagcgccagaaggagatcatgaggcagaggcagcagcagcaggaggctttacggcgg
ctgcagcagcagcagcaacagcagcaacttgcacaaatgaagctcccttcatcttcaacc
tggggtcagcaatcaaattcaggagcttgtcaatcccagaccacactgtcattggccgaa
atccaaaagttagaagaagaacgagaacggcagctccgagaagagcaaaggcgtcagcag
cgcgaactaatgaaggccctccagcaacagcagcagcaacagcagcaaaaattgtcaggc
tggggtaatgtcaccaaaccaacaggcaccaccaagtccctgctggagatacagcaggaa
gaggcaaggcagatgcagaaacagcagcaacagcagcaccagcagccgaacagagtcaga
aataccacgcactctaacctgcacaccagcattgggaattcagtgtggggctctctaaac
acgaatcccagcaaccagtgggcatctgacctagtcagtagcatatggagtaatgccgat
accaaaaactcaaacatgggtttctgggatgatgcagtgaaggaagtgggacctcgtaac
tcgaccaataaaaataaaagcaatgccagcctcagtaaatctgtaggtattacaagtaga
caaaacaagaaggtagaagaagaggagaagctgttgaaattgttccagggtgtaaataaa
gcccaggatggattcactcagtggtgtgaacagatgcttcatgcactcaacacagccaac
aacttagatgttcccacgtttgtttctttcctgaaggaagtggaatctccctatgaggtc
catgactacatccgagcctaccttggagatactcctgaggccaaggagtttgccaagcag
ttcctcgagcgccgtgccaaacagaaagccagtcagcagcggcagcagcagcaacagcag
gattcagtgtgggggatgaaccacagttcgttacattcagtctttcagaccaatcagagc
aacaaccagcagtccaactttgaggctgtgcagagcgggaagaaaaagaagaaacagaaa
atggttcgagcagatcccagcttgttaggattttcagtgaatgcttcatcagagcggctc
aatatgggagaaatagagactttggaagactactga
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