Lonchura striata (white-rumped munia): 110478063
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Entry
110478063 CDS
T05897
Symbol
PUF60
Name
(RefSeq) poly(U)-binding-splicing factor PUF60 isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110478063 (PUF60)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsr03041
]
110478063 (PUF60)
Spliceosome [BR:
lsr03041
]
Complex A
U2 snRNP components
U2 related factors
110478063 (PUF60)
Complex B
110478063 (PUF60)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
110478063
NCBI-ProteinID:
XP_021400104
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Position
2:complement(151761679..151782822)
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AA seq
641 aa
AA seq
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MHFNWFEPVLLGTRIVTALPEAPGPASAAALRAAAAELKPRSPGITPHHISHLRRRRRLS
HAILPAAGGHVMPSRGLAILFASAARPPFPARARATELSREARAADGEDKMAATTAMALG
TESIKMENGQSTAAKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTIAHQQQQLTNL
QMAAVTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSI
DMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQL
AEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQ
SSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEA
VAGAAVLGTLATPGLVSPALTLAQPLGALPQAVMAAQAPGVITGVTPARPPIPVTIPQVG
VVNPILASPPALGLVEVKKEKEEEEVFQESERPEMLSEQEHMSISGSSARHMVMQKLLRK
QESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVE
FSMASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcattttaactggtttgaacccgttctgctcgggactcggattgtcacagccctgccc
gaggcaccgggtcctgccagtgcagcggcgctgagggccgcagcagccgagctgaagccc
cgctcccccgggatcacgccacaccacatctcacacctccgacggcgacgacgcctgagt
cacgccatcttgccagccgccgggggtcacgtgatgccctcccgcggtctcgcgatactt
ttcgcgagcgccgcccggcccccgtttcccgcgcgcgcgcgcgccactgagctctcgcga
gaggcgcgtgctgcagacggggaggacaagatggctgcgacaacggcgatggcgctgggt
acggagtccattaagatggaaaacgggcaaagcacagcagcaaagctggggctgccccct
ctcaccccggagcagcaggaagctctccagaaagccaagaagtacgcgatggagcagagc
atcaagagcgtgctggtgaaacaaaccatcgcccaccagcagcagcagctcaccaacctc
cagatggcagcagtgacaatgggctttggagatcctctctcacctttacaatcgatggcg
gctcagaggcagcgggcactcgccatcatgtgccgggtctacgtgggctccatctactac
gagctgggggaggacaccatccgccaggccttcgcccccttcgggcccatcaagagcatc
gacatgtcctgggactccgtcaccatgaagcacaagggctttgcctttgtggaatatgag
gttcctgaggctgcccagctggccctggagcagatgaattctgtcatgctggggggaagg
aacatcaaggtggggaggcccagcaacatcgggcaggctcagcccatcattgaccagctg
gcagaggaggcccgggccttcaaccgcatctacgtggcctctgtgcaccaggacctgtcc
gacgacgacatcaagagcgtgttcgaagcctttgggaagatcaaatcctgcaccttggcc
agggaccccacgacagggaagcacaaaggctacggcttcattgagtatgaaaaggcacag
tcctcccaggatgccgtgtcctccatgaacctctttgacctgggcgggcagtacctgcgg
gtgggcaaggctgtgacgcccccgatgcccctcctgaccccggccacacctggagggctc
ccacctgcagctgctgtcgctgctgccgctgccaccgccaagatcacggcacaggaagcc
gtggcaggagctgcagtgctgggcacgctggcaaccccggggcttgtgtcccctgccctg
accttggcccagcccctgggggctctgcctcaggctgtgatggctgcacaggcccccggt
gtcatcacaggtgtgacccctgcccggccgcccatcccggtgaccatcccgcaggtgggg
gttgtgaatcccatcctggccagccccccagccctggggctggtggaggtgaagaaggag
aaggaggaggaggaggtgttccaggagtcggagcggccagagatgctgagtgagcaggag
cacatgagcatttcgggcagcagcgcccgccacatggtcatgcagaagctgctccgcaag
caggagtccacggtgatggtgctgcggaacatggtggatcccaaggacatcgatgatgac
ctggagggagaagtgacagaagagtgcggcaagttcggggctgtgaacagggtcatcatc
taccaggagaagcagggcgaggaggaggatgctgagatcattgtcaagatctttgtggaa
ttctccatggcctcagagactcacaaggccatccaggcgctcaacgggcgctggttcgca
ggcaggaaggtggtggccgaggtctacgaccaggagaggtttgacaacagcgacctctca
gcatga
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