Lonchura striata (white-rumped munia): 110478119
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Entry
110478119 CDS
T05897
Symbol
PUS1
Name
(RefSeq) pseudouridylate synthase 1 homolog isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsr03016
]
110478119 (PUS1)
Enzymes [BR:
lsr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
110478119 (PUS1)
Transfer RNA biogenesis [BR:
lsr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
110478119 (PUS1)
Prokaryotic type
110478119 (PUS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
WC-rich
Motif
Other DBs
NCBI-GeneID:
110478119
NCBI-ProteinID:
XP_021400243
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Position
15:complement(8683578..8689038)
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AA seq
426 aa
AA seq
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MLRWGLRVLSCGCSAPRKRQHSVLAMAEDLIAAVASQTKRLNSSSEVVQRLEENGHQNKK
LKSDADEEDAEDQNKKLPKRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVQSG
CIPENHGEDMKKMSFQRCARTDKGVSAAGQIVSLKVRLIDDILEKINNHLPSHIRILGLK
RVTGGFNSKNKCDARTYSYMLPTFAFAHKDQDVQEELFRLDRDTLERVNRLLGCYKGTHN
FHNFTSQKGPRDPSAKRYIMEMYCGEPFVRENVEFAVIQVKGQSFMMHQIRKMIGLVIAI
VKGYAPESIMERSWGEEKVDVPKAPGLGLVLEKVHFEKYNRRFGNDGLHEPLEWTEEEEK
IAVFKEQYIYPTIINTEREEKSMANWLKTLPIHDFNSSAVEMQTNNKNSKKSSDLEGSDG
CGDDSD
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggtgggggctccgcgtcctgagctgcggctgctccgccccgcggaagcggcag
cacagcgttcttgcgatggctgaggatttgatagcagcggttgccagccagacaaagaga
ctcaacagcagcagcgaggtggttcaaaggctggaagaaaacgggcatcagaataaaaag
ttgaagagtgatgcagatgaggaagatgcagaggatcagaataagaagttgcccaaaagg
aagattgtgctgttgatggcatattcagggaaaggctaccatggcatgcaaagaaatgtg
ggatcttcacagttcaagacaattgaagatgacctggtctctgcccttgttcagtcaggg
tgcatcccagagaaccacggggaagatatgaagaagatgtctttccagcgctgtgctcga
acagataagggtgtgtctgcagctggacagattgtgtcactgaaggtcaggctaatagat
gacatcttagaaaagatcaataatcatcttccttctcacatcagaattctgggcctgaag
agagtcactggggggttcaactccaagaacaaatgtgatgccagaacctactcttacatg
ctgccaacgtttgcctttgcccataaggaccaggatgtgcaggaggagctttttcggctg
gacagagacacccttgaaagggtcaatcgactgctgggctgctacaaagggacacacaac
ttccacaacttcacatcacagaagggccccagggaccccagtgccaagaggtacatcatg
gagatgtactgtggagagcccttcgtcagggaaaacgtggaatttgcagtgatccaagtg
aaaggtcagagtttcatgatgcaccagatcaggaagatgattgggctggtgatagcaatt
gtgaaaggttatgctcctgagtccatcatggaacgtagctggggagaggagaaggttgat
gtccccaaagccccaggacttgggctggttttggagaaagtacactttgaaaaatacaac
aggcgttttgggaatgatgggctgcatgagccactggagtggacagaggaggaggagaag
attgctgttttcaaagagcagtacatctatcctaccattatcaacacagaaagggaggag
aaatccatggcaaactggctaaaaaccctccccattcatgacttcaactcgtctgctgtt
gagatgcaaactaacaacaaaaattcaaagaagagcagcgatctcgaaggcagcgatggt
tgtggcgatgattctgactga
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