KEGG   Lonchura striata (white-rumped munia): 110478168
Entry
110478168         CDS       T05897                                 
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X6
  KO
K23625  ataxin 2/2L
Organism
lsr  Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsr03019]
    110478168 (ATXN2)
Messenger RNA biogenesis [BR:lsr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110478168 (ATXN2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 110478168
NCBI-ProteinID: XP_021400315
LinkDB
Position
15:10703589..10752624
AA seq 1021 aa
MSLKQAAAAAQPAGNNRKPPGGGGPGLPSAAGRQNMGRGRSSGKGPPQPTISFDGIYANM
RMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVVDAAHRKTAESSLGPKREDILE
SILFKSSDFVMVHFKDMDTNYARRDAFTDSAISAKVNGEHKEKDLEPWDGGENTASEELE
ALETDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARATQLAE
EIESSAQYKARVALENDERTEEEKYTAVQRNANEREGHGVNTRENKYIPPGQRNRDVLSW
GSGRQNSPRMGQSGSGPPISRSGSHTSEFSPNSGADQRVVNGGPPRMSPKAQRHPRGHRV
STGRGTISSGLEFVSHNAPGEASTAAVARGSPSGGTWSSVVSGVPRLSPKTHRPRSPRQS
STPMGPALPSPQPGTIPTESVAMPVPAASPTPASPASNRAVTPSNEAKDTRLQDQRQNSA
TGNKENIKPSETSPSFSKPENKGVSPIVSEHRKQIDDLKKFKNDFRLQSSSSSDAVDQLL
NKTREGEKSRDVVKEKTESTPKESIIEAGSNTNSNGGSSKPNSPSISPSMSNSSEQKRGP
EVTSQGVQTSGPGSKQDKEDKEEKKDTSEQVRKSTLNPNAKEFNPRSFAQPKPSTTPTSP
RPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYR
AGKVPNMPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVP
HYQSQHPHVYSPVIQGNARMMAPPAHAQPGLVSSSATQYGAHEQTHAMYVSTGSLAQQYA
HPNATLHPHPPHPQPSATPTGQQQSQHAGSHPAPSPVQHHQHQAAQALHLANPQQQSAIY
HAGLAPTPPSMTPGSNTQSPQNNFPTAQQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSG
MVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTTHFPYMTHPSGEECVPGRPA
P
NT seq 3066 nt   +upstreamnt  +downstreamnt
atgtccctcaagcaagcggcggcggcggcgcagcccgccggcaacaaccgcaagcccccc
ggcggcggcggccccggcctcccgtcagccgcggggaggcagaacatgggcagaggccgc
agcagtggcaaaggaccacctcagcctacgatttcttttgatggcatctatgcaaacatg
agaatggttcacatactcacatcagttgttggatccaaatgtgaagtacaggtgaaaaat
ggtggtatatatgaaggagtttttaaaacctacagtcccaagtgtgatttagtggttgat
gctgctcatcggaaaactgcagaatccagtctggggccaaaacgggaggacatccttgag
agtatcttgttcaagtcttcagactttgttatggtgcattttaaggatatggataccaat
tatgccagaagagatgcttttactgattcagccatcagtgctaaagttaatggagagcac
aaggagaaggatctggaaccatgggatggaggagagaacacggcttccgaggagctggag
gcgctggagaccgatgtctctaatggatgggatcccaatgacatgtttcgttacaatgaa
gaaaattatggtgtagtgtcaacttatgacagcagtttatcttcttatacggtgccatta
gaaagagataattcagaagagtttttaaagcgggaagccagagcaactcaattagcagag
gaaattgaatcaagtgcccaatacaaagctcgggttgccttggaaaatgatgaaaggaca
gaagaagaaaaatatactgctgttcagagaaatgctaatgaaagagaaggacatggtgtg
aacactagagaaaataaatacattccacctggacagaggaacagggatgtcctgtcctgg
ggaagtggaagacaaaactcaccgaggatgggccagtctggatcaggcccaccaatctca
aggtctggatcccacacttcagaattcagccctaactctggagcagatcagagagtagtt
aacggagggcctccacggatgtctccaaaggctcaacggcaccctcgaggtcacagagtc
tctactggtaggggtacaatttcaagtggcttagaatttgtatctcataatgcacctggg
gaagcatctactgctgcagtggcacgaggcagcccttcaggtgggacgtggtcatcagtt
gtcagtggggttccgagattatcccctaaaacacacaggcctaggtctccaaggcagagc
agcactcccatgggaccagctctgccttctcctcagcctggtactattcccactgaatct
gttgccatgcctgttccagctgcctctcctacacctgccagccctgcatccaacagagca
gtcaccccttccaacgaagctaaagatacaaggcttcaggaccagaggcaaaattctgca
actggaaacaaggagaatataaagccaagtgagacttctcctagtttttctaaacctgaa
aacaaaggtgtctctccaattgtttcagagcatagaaaacagattgatgatttaaagaaa
tttaagaatgactttaggttacagtccagttcctcttcagatgcagtggatcagctgcta
aacaaaacccgagaaggtgaaaaatcaagagatgtagttaaagaaaagacagaatccacc
cctaaagaatctatcatagaagctggcagtaacaccaactccaatggtggcagtagcaaa
cccaacagtcccagtatttctccttccatgagtaacagctctgagcaaaagcgtgggcct
gaggtgacctcccaaggtgtacagacatctgggcctggaagtaaacaagacaaagaggat
aaagaggagaagaaggatacttctgagcaagttagaaaatcaacacttaatcctaatgct
aaagagttcaaccctcgatcttttgctcaaccgaaaccttctactacaccaacctcccct
cgtcctcaagctcagcccagcccctccatggtggggcatcagcagccaacccccgtgtac
actcagcctgtttgttttgcaccaaatatgatgtacccggttccagtgagtccaggcgtg
cagcctttgtatcctattcccatgacgcccatgccagtgaaccaagccaagacatataga
gcaggtaaagtaccaaatatgccccagcagcggcaagaccaacaccaccagagcaccatg
atgcatcctgcctcagcagcaggccctccaattgtagctactccacctgcttactctaca
caatatgttgcatatagcccccaacagtttcctaatcagcctcttgtgcagcatgtgcca
cactaccaatctcagcatcctcatgtttatagccctgtaatacagggcaacgctaggatg
atggccccaccagcacacgcacagccgggtttagtatcttcctctgcaacacagtacggt
gcgcatgaacagacacatgctatgtatgtttccactggctcacttgctcagcagtatgcc
caccctaatgctaccctgcacccgcatcctccgcatcctcagccttctgccaccccaact
ggccagcagcaaagccaacatgctggaagccaccctgctccaagccccgtgcagcaccac
cagcaccaggctgcccaggccctgcacctggccaacccccagcagcagtcggcgatttac
cacgcaggtctagctccaacccctccttccatgacgccaggctccaacacgcagtctcca
caaaacaattttcctacagcacaacaaacagtcttcaccattcatccctcccatgttcaa
cctgcatataccaatccgccacacatggcccatgtcccccaggctcatgtacagtcagga
atggttccttctcacccaactgcccatgctccaatgatgctaatgacgacacagcctccc
ggtggtccccaagccgccctcgctcaaagtgcactacagcccattccagtctcgacaaca
acacatttcccctatatgacccacccttcaggtgaggagtgtgtgcccgggagacctgca
ccctaa

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