Lonchura striata (white-rumped munia): 110478189
Help
Entry
110478189 CDS
T05897
Symbol
USP30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110478189 (USP30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsr01002
]
110478189 (USP30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110478189 (USP30)
04121 Ubiquitin system [BR:
lsr04121
]
110478189 (USP30)
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110478189 (USP30)
Peptidases and inhibitors [BR:
lsr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110478189 (USP30)
Membrane trafficking [BR:
lsr04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
110478189 (USP30)
Ubiquitin system [BR:
lsr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110478189 (USP30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
110478189
NCBI-ProteinID:
XP_021400358
UniProt:
A0A218V697
LinkDB
All DBs
Position
15:complement(10184765..10199050)
Genome browser
AA seq
477 aa
AA seq
DB search
MRSWGVLGGAAAALAAGIYVLWGPIGGRKRRRRGLVPGLLNLGNTCFMNSLLQGLSSCPS
FIRWLEEFTAQYRTEQKAQEHQQLLSVTLLQLLRALSCQEVTEDDVLDASCLLEVLRMNR
WQISSFEEQDAHELFHVLTSSLEDERDRQPRVTHLFDVQSLEQPEIIQKQISCRTRGSLP
PMSNHWKTQHPFHGRLTSNMVCKHCEHQSPVRFDTFDSLSLSIPAAVWGRPMTLDHCLHH
FISSESVKDVVCDNCTKIQAEGILNGQSIENQRTTFVKQLKLGKLPQCLCIHLQRLSWSS
QGTPLKRHEHVQFNEFLVMDIYKYRVPGPKSCQEQLSQKNSEETTPGMKDGRAGKPSDAE
QPAGTKPLFMNGASSSSSSSPSFLMSPGTFPLTSFPECRAPLYLYRLMAVVVHHGDMHSG
HFVTFRRAPGARGSQWLWISDESVRRASLHEVLAASAYLLFYERVHGRAQPQSPAQS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcggagctggggggtgctggggggcgcggcggcggcgctggcggccggcatttacgtc
ctgtggggccccatcggcggcaggaagcggcggcggagagggctggtgccaggcctcctg
aacctgggcaacacgtgtttcatgaactccctgctgcagggcttgtcctcctgcccctcg
ttcatcaggtggctggaggagttcacagcccagtacaggacagagcagaaggcccaggag
caccagcagctcctctccgtgacgctgctgcagctcctcagagctttgtcctgccaggag
gtgacagaggacgatgtcctggatgccagctgcctgctggaggtgctgaggatgaacagg
tggcagatctcctcctttgaggagcaggatgcccatgagctgttccatgtcctgacctct
tccctggaggacgaacgggatcggcagccccgtgtgacccatttgtttgatgtgcaatcc
ctggagcaaccagaaataatccaaaagcaaataagctgcaggacaagaggatctcttccc
cctatgtccaaccactggaaaactcagcaccctttccatggaaggctgaccagcaacatg
gtctgcaaacactgtgagcaccagagccctgtgaggttcgacaccttcgacagcctctcc
ctgagcattccagcagctgtgtggggtcgtcccatgacactggaccattgcctccatcac
ttcatctcctcagagtctgtgaaggatgttgtgtgtgacaactgcaccaaaatccaggca
gaaggaattctgaatggacagagcatagaaaaccagagaacaacgtttgttaagcaatta
aagttaggaaagctgccccagtgtttatgcatccacctgcaaaggctgagctggtccagc
caaggcactcccctgaagagacacgagcacgtccagttcaacgagttcctggtcatggac
atctacaaatatcgggttcctggtcccaaatcctgccaggagcagctcagccagaaaaac
tctgaggagacaacccctggaatgaaggatgggagagcagggaaaccttcagatgcagag
caaccagctggtaccaaacctctcttcatgaatggtgcctcctcttcctcctcctcctct
ccctcatttttgatgtccccaggaactttcccacttacttcattccctgagtgtagggcc
ccgctgtacctgtaccgcctgatggccgtggtggtgcaccacggggacatgcactcggga
cacttcgtcaccttccggcgcgcgccgggcgcccgcggcagccagtggctctggatctcg
gacgagtcggtgcgcagggccagcctgcacgaggtgctggctgccagcgcctacctgctg
ttctacgagcgcgtgcacggccgggcccagccccagagcccggcccagagctga
DBGET
integrated database retrieval system
